Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc13n18
         (798 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017325-1|AAH17325.1|  312|Homo sapiens chromosome 16 open read...   197   3e-50
BC016699-1|AAH16699.1|  312|Homo sapiens chromosome 16 open read...   197   3e-50
BC013943-1|AAH13943.1|  312|Homo sapiens chromosome 16 open read...   197   3e-50
AL031709-5|CAB56183.1|  312|Homo sapiens novel protein containin...   197   3e-50
AE006467-2|AAK61276.1|  312|Homo sapiens similar to UND313 (S. c...   197   3e-50

>BC017325-1|AAH17325.1|  312|Homo sapiens chromosome 16 open reading
           frame 42 protein.
          Length = 312

 Score =  197 bits (481), Expect = 3e-50
 Identities = 89/157 (56%), Positives = 112/157 (71%)
 Frame = -3

Query: 562 PKKCSGRKLLRHNLIKNLKLGHRFQGLVLSPVGTQCVSPNDKSIIETFGLAVIDCSWAKI 383
           P++C+GRKL R  L++ L+LGHRF GLVLSPVG Q  SP D+ ++   G+AVIDCSWA++
Sbjct: 70  PRRCTGRKLARLGLVRCLRLGHRFGGLVLSPVGKQYASPADRQLVAQSGVAVIDCSWARL 129

Query: 382 DETPFSRMKSPHPRLLPFLVAANPINYGKPYQLSCVEALAAAMFITGHKSEAKFYLSKFS 203
           DETPF +M+  H RLLP+LVAANP+NYG+PY+LSCVEA AA   I G    A   L KF 
Sbjct: 130 DETPFGKMRGSHLRLLPYLVAANPVNYGRPYRLSCVEAFAATFCIVGFPDLAVILLRKFK 189

Query: 202 WGHSFLELNSDALDLYAACTDSKSVLEAQATFLESVK 92
           WG  FL+LN   LD YAAC   + VL+A+  FL + K
Sbjct: 190 WGKGFLDLNRQLLDKYAACGSPEEVLQAEQEFLANAK 226


>BC016699-1|AAH16699.1|  312|Homo sapiens chromosome 16 open reading
           frame 42 protein.
          Length = 312

 Score =  197 bits (481), Expect = 3e-50
 Identities = 89/157 (56%), Positives = 112/157 (71%)
 Frame = -3

Query: 562 PKKCSGRKLLRHNLIKNLKLGHRFQGLVLSPVGTQCVSPNDKSIIETFGLAVIDCSWAKI 383
           P++C+GRKL R  L++ L+LGHRF GLVLSPVG Q  SP D+ ++   G+AVIDCSWA++
Sbjct: 70  PRRCTGRKLARLGLVRCLRLGHRFGGLVLSPVGKQYASPADRQLVAQSGVAVIDCSWARL 129

Query: 382 DETPFSRMKSPHPRLLPFLVAANPINYGKPYQLSCVEALAAAMFITGHKSEAKFYLSKFS 203
           DETPF +M+  H RLLP+LVAANP+NYG+PY+LSCVEA AA   I G    A   L KF 
Sbjct: 130 DETPFGKMRGSHLRLLPYLVAANPVNYGRPYRLSCVEAFAATFCIVGFPDLAVILLRKFK 189

Query: 202 WGHSFLELNSDALDLYAACTDSKSVLEAQATFLESVK 92
           WG  FL+LN   LD YAAC   + VL+A+  FL + K
Sbjct: 190 WGKGFLDLNRQLLDKYAACGSPEEVLQAEQEFLANAK 226


>BC013943-1|AAH13943.1|  312|Homo sapiens chromosome 16 open reading
           frame 42 protein.
          Length = 312

 Score =  197 bits (481), Expect = 3e-50
 Identities = 89/157 (56%), Positives = 112/157 (71%)
 Frame = -3

Query: 562 PKKCSGRKLLRHNLIKNLKLGHRFQGLVLSPVGTQCVSPNDKSIIETFGLAVIDCSWAKI 383
           P++C+GRKL R  L++ L+LGHRF GLVLSPVG Q  SP D+ ++   G+AVIDCSWA++
Sbjct: 70  PRRCTGRKLARLGLVRCLRLGHRFGGLVLSPVGKQYASPADRQLVAQSGVAVIDCSWARL 129

Query: 382 DETPFSRMKSPHPRLLPFLVAANPINYGKPYQLSCVEALAAAMFITGHKSEAKFYLSKFS 203
           DETPF +M+  H RLLP+LVAANP+NYG+PY+LSCVEA AA   I G    A   L KF 
Sbjct: 130 DETPFGKMRGSHLRLLPYLVAANPVNYGRPYRLSCVEAFAATFCIVGFPDLAVILLRKFK 189

Query: 202 WGHSFLELNSDALDLYAACTDSKSVLEAQATFLESVK 92
           WG  FL+LN   LD YAAC   + VL+A+  FL + K
Sbjct: 190 WGKGFLDLNRQLLDKYAACGSPEEVLQAEQEFLANAK 226


>AL031709-5|CAB56183.1|  312|Homo sapiens novel protein containing
           RLI and DUF367 domains protein.
          Length = 312

 Score =  197 bits (481), Expect = 3e-50
 Identities = 89/157 (56%), Positives = 112/157 (71%)
 Frame = -3

Query: 562 PKKCSGRKLLRHNLIKNLKLGHRFQGLVLSPVGTQCVSPNDKSIIETFGLAVIDCSWAKI 383
           P++C+GRKL R  L++ L+LGHRF GLVLSPVG Q  SP D+ ++   G+AVIDCSWA++
Sbjct: 70  PRRCTGRKLARLGLVRCLRLGHRFGGLVLSPVGKQYASPADRQLVAQSGVAVIDCSWARL 129

Query: 382 DETPFSRMKSPHPRLLPFLVAANPINYGKPYQLSCVEALAAAMFITGHKSEAKFYLSKFS 203
           DETPF +M+  H RLLP+LVAANP+NYG+PY+LSCVEA AA   I G    A   L KF 
Sbjct: 130 DETPFGKMRGSHLRLLPYLVAANPVNYGRPYRLSCVEAFAATFCIVGFPDLAVILLRKFK 189

Query: 202 WGHSFLELNSDALDLYAACTDSKSVLEAQATFLESVK 92
           WG  FL+LN   LD YAAC   + VL+A+  FL + K
Sbjct: 190 WGKGFLDLNRQLLDKYAACGSPEEVLQAEQEFLANAK 226


>AE006467-2|AAK61276.1|  312|Homo sapiens similar to UND313 (S.
           cervisiae) protein.
          Length = 312

 Score =  197 bits (481), Expect = 3e-50
 Identities = 89/157 (56%), Positives = 112/157 (71%)
 Frame = -3

Query: 562 PKKCSGRKLLRHNLIKNLKLGHRFQGLVLSPVGTQCVSPNDKSIIETFGLAVIDCSWAKI 383
           P++C+GRKL R  L++ L+LGHRF GLVLSPVG Q  SP D+ ++   G+AVIDCSWA++
Sbjct: 70  PRRCTGRKLARLGLVRCLRLGHRFGGLVLSPVGKQYASPADRQLVAQSGVAVIDCSWARL 129

Query: 382 DETPFSRMKSPHPRLLPFLVAANPINYGKPYQLSCVEALAAAMFITGHKSEAKFYLSKFS 203
           DETPF +M+  H RLLP+LVAANP+NYG+PY+LSCVEA AA   I G    A   L KF 
Sbjct: 130 DETPFGKMRGSHLRLLPYLVAANPVNYGRPYRLSCVEAFAATFCIVGFPDLAVILLRKFK 189

Query: 202 WGHSFLELNSDALDLYAACTDSKSVLEAQATFLESVK 92
           WG  FL+LN   LD YAAC   + VL+A+  FL + K
Sbjct: 190 WGKGFLDLNRQLLDKYAACGSPEEVLQAEQEFLANAK 226


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,438,405
Number of Sequences: 237096
Number of extensions: 2152154
Number of successful extensions: 7414
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7414
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)