Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13n17
(179 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-P... 31 0.21
AE014296-3423|AAF51643.2| 1959|Drosophila melanogaster CG11451-P... 30 0.37
AY069226-1|AAL39371.1| 571|Drosophila melanogaster GH27293p pro... 28 1.5
AE014134-2139|AAF53150.1| 571|Drosophila melanogaster CG6785-PA... 28 1.5
AE014134-2469|AAS64704.1| 1853|Drosophila melanogaster CG32972-P... 27 3.5
BT001323-1|AAN71078.1| 495|Drosophila melanogaster AT16616p pro... 27 4.6
Y15102-1|CAA75377.1| 255|Drosophila melanogaster 3-hydroxyacyl-... 26 8.0
BT029045-1|ABJ16978.1| 255|Drosophila melanogaster IP05285p pro... 26 8.0
BT003586-1|AAR88555.1| 2558|Drosophila melanogaster LD10678p pro... 26 8.0
BT001450-1|AAN71205.1| 719|Drosophila melanogaster GH27257p pro... 26 8.0
AY121672-1|AAM51999.1| 255|Drosophila melanogaster RE18259p pro... 26 8.0
AY069780-1|AAL39925.1| 741|Drosophila melanogaster SD02338p pro... 26 8.0
AY069301-1|AAL39446.1| 518|Drosophila melanogaster HL03404p pro... 26 8.0
AF145594-1|AAD38569.1| 721|Drosophila melanogaster BcDNA.GH0191... 26 8.0
AE014298-2661|AAF48797.1| 255|Drosophila melanogaster CG7113-PA... 26 8.0
AE014296-3425|AAF51645.2| 926|Drosophila melanogaster CG3680-PA... 26 8.0
AE014296-654|AAN11564.1| 710|Drosophila melanogaster CG12076-PB... 26 8.0
AE014296-653|AAF47768.2| 721|Drosophila melanogaster CG12076-PA... 26 8.0
AE014296-515|AAF47691.2| 2252|Drosophila melanogaster CG2083-PA ... 26 8.0
AE014135-137|AAS64601.1| 8647|Drosophila melanogaster CG32019-PE... 26 8.0
AE014135-136|AAS64600.1| 8648|Drosophila melanogaster CG32019-PC... 26 8.0
AE014135-135|AAS64599.1| 8930|Drosophila melanogaster CG32019-PD... 26 8.0
AE014135-134|AAF59316.4| 8943|Drosophila melanogaster CG32019-PA... 26 8.0
>AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-PA
protein.
Length = 1161
Score = 31.1 bits (67), Expect = 0.21
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -2
Query: 172 VALKLPVAPSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPT 29
+A K PVA STT VPT+++ SK S + ++ T +P+
Sbjct: 340 LAKKYPVATSTTTKVPTTLATSKTTSRSSSSSTTTTTMATSTTATSPS 387
>AE014296-3423|AAF51643.2| 1959|Drosophila melanogaster CG11451-PA
protein.
Length = 1959
Score = 30.3 bits (65), Expect = 0.37
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -2
Query: 151 APSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLM 20
AP T Y PT S + ++S+ + R S KN+ T A +L M
Sbjct: 227 APVATLYPPTQQSLMELEEDSIVREMRESTKNQTKTPAQKSLFM 270
>AY069226-1|AAL39371.1| 571|Drosophila melanogaster GH27293p
protein.
Length = 571
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 127 PTSISGSKKRKNSVPAKQRSSIKNRRNTTAAP 32
P I G+KK +N PA + TTAAP
Sbjct: 333 PPRIEGNKKNQNKRPATTTTKATTTTTTTAAP 364
>AE014134-2139|AAF53150.1| 571|Drosophila melanogaster CG6785-PA
protein.
Length = 571
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 127 PTSISGSKKRKNSVPAKQRSSIKNRRNTTAAP 32
P I G+KK +N PA + TTAAP
Sbjct: 333 PPRIEGNKKNQNKRPATTTTKATTTTTTTAAP 364
>AE014134-2469|AAS64704.1| 1853|Drosophila melanogaster CG32972-PA,
isoform A protein.
Length = 1853
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = -2
Query: 151 APSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLMVSDNT 5
AP+TT+ +PT+ + K SS TTA T ++ T
Sbjct: 1583 APTTTDNIPTTTNAPTTTKEITTTTSASSTDETTTTTAPTTTKDITTTT 1631
>BT001323-1|AAN71078.1| 495|Drosophila melanogaster AT16616p
protein.
Length = 495
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -2
Query: 160 LPVAPSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLMVSD 11
+P STT + S S + +N VPA + I + T + M++D
Sbjct: 405 VPTPTSTTSIYQPTTSSSYQGQNPVPANNNAPIGSNPRTDLTNIMRMLAD 454
>Y15102-1|CAA75377.1| 255|Drosophila melanogaster 3-hydroxyacyl-CoA
dehydrogenasetype II protein.
Length = 255
Score = 25.8 bits (54), Expect = 8.0
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +3
Query: 9 LSLTIKSVGAAVVLRRFFIEDRCLAGTEFFLFLLPLIEVGTYSVVDGATGNLSA 170
L LT+ G A ++ F E F ++ + VGT++V+ + G + A
Sbjct: 79 LDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRLSAGLMGA 132
>BT029045-1|ABJ16978.1| 255|Drosophila melanogaster IP05285p
protein.
Length = 255
Score = 25.8 bits (54), Expect = 8.0
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +3
Query: 9 LSLTIKSVGAAVVLRRFFIEDRCLAGTEFFLFLLPLIEVGTYSVVDGATGNLSA 170
L LT+ G A ++ F E F ++ + VGT++V+ + G + A
Sbjct: 79 LDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRLSAGLMGA 132
>BT003586-1|AAR88555.1| 2558|Drosophila melanogaster LD10678p
protein.
Length = 2558
Score = 25.8 bits (54), Expect = 8.0
Identities = 10/43 (23%), Positives = 25/43 (58%)
Frame = -2
Query: 130 VPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQ 2
V IS +RK+++ AK+ ++ +++ ++ +L + NT+
Sbjct: 784 VKEEISSDVRRKSTIKAKEEITVDDKKASSRRSSLAVEESNTE 826
>BT001450-1|AAN71205.1| 719|Drosophila melanogaster GH27257p
protein.
Length = 719
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 145 STTEYVPTSISGSKKRKNSVPAKQ 74
S+ +S++GS KRK PAKQ
Sbjct: 61 SSVSTATSSLAGSSKRKTKKPAKQ 84
>AY121672-1|AAM51999.1| 255|Drosophila melanogaster RE18259p
protein.
Length = 255
Score = 25.8 bits (54), Expect = 8.0
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +3
Query: 9 LSLTIKSVGAAVVLRRFFIEDRCLAGTEFFLFLLPLIEVGTYSVVDGATGNLSA 170
L LT+ G A ++ F E F ++ + VGT++V+ + G + A
Sbjct: 79 LDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRLSAGLMGA 132
>AY069780-1|AAL39925.1| 741|Drosophila melanogaster SD02338p
protein.
Length = 741
Score = 25.8 bits (54), Expect = 8.0
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -2
Query: 115 SGSKKRKNSVPAKQRSS--IKNRRNTTAAPTLLMVSDNT 5
SGSKK+K+S K +++ KN + APTL S T
Sbjct: 624 SGSKKKKSSDSKKSQANEQSKNEKVALHAPTLTTTSWTT 662
>AY069301-1|AAL39446.1| 518|Drosophila melanogaster HL03404p
protein.
Length = 518
Score = 25.8 bits (54), Expect = 8.0
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -2
Query: 115 SGSKKRKNSVPAKQRSS--IKNRRNTTAAPTLLMVSDNT 5
SGSKK+K+S K +++ KN + APTL S T
Sbjct: 401 SGSKKKKSSDSKKSQANEQSKNEKVALHAPTLTTTSWTT 439
>AF145594-1|AAD38569.1| 721|Drosophila melanogaster BcDNA.GH01918
protein.
Length = 721
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 145 STTEYVPTSISGSKKRKNSVPAKQ 74
S+ +S++GS KRK PAKQ
Sbjct: 63 SSVSTATSSLAGSSKRKTKKPAKQ 86
>AE014298-2661|AAF48797.1| 255|Drosophila melanogaster CG7113-PA
protein.
Length = 255
Score = 25.8 bits (54), Expect = 8.0
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +3
Query: 9 LSLTIKSVGAAVVLRRFFIEDRCLAGTEFFLFLLPLIEVGTYSVVDGATGNLSA 170
L LT+ G A ++ F E F ++ + VGT++V+ + G + A
Sbjct: 79 LDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRLSAGLMGA 132
>AE014296-3425|AAF51645.2| 926|Drosophila melanogaster CG3680-PA
protein.
Length = 926
Score = 25.8 bits (54), Expect = 8.0
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -2
Query: 151 APSTTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTA 38
AP+T + SIS + K V K+RS+ R+T A
Sbjct: 412 APTTPKTTVKSISPTTTTKKEVAPKKRSATPTARSTKA 449
>AE014296-654|AAN11564.1| 710|Drosophila melanogaster CG12076-PB,
isoform B protein.
Length = 710
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 145 STTEYVPTSISGSKKRKNSVPAKQ 74
S+ +S++GS KRK PAKQ
Sbjct: 52 SSVSTATSSLAGSSKRKTKKPAKQ 75
>AE014296-653|AAF47768.2| 721|Drosophila melanogaster CG12076-PA,
isoform A protein.
Length = 721
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 145 STTEYVPTSISGSKKRKNSVPAKQ 74
S+ +S++GS KRK PAKQ
Sbjct: 63 SSVSTATSSLAGSSKRKTKKPAKQ 86
>AE014296-515|AAF47691.2| 2252|Drosophila melanogaster CG2083-PA
protein.
Length = 2252
Score = 25.8 bits (54), Expect = 8.0
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -2
Query: 115 SGSKKRKNSVPAKQRSS--IKNRRNTTAAPTLLMVSDNT 5
SGSKK+K+S K +++ KN + APTL S T
Sbjct: 2135 SGSKKKKSSDSKKSQANEQSKNEKVALHAPTLTTTSWTT 2173
>AE014135-137|AAS64601.1| 8647|Drosophila melanogaster CG32019-PE,
isoform E protein.
Length = 8647
Score = 25.8 bits (54), Expect = 8.0
Identities = 10/43 (23%), Positives = 25/43 (58%)
Frame = -2
Query: 130 VPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQ 2
V IS +RK+++ AK+ ++ +++ ++ +L + NT+
Sbjct: 724 VKEEISSDVRRKSTIKAKEEITVDDKKASSRRSSLAVEESNTE 766
>AE014135-136|AAS64600.1| 8648|Drosophila melanogaster CG32019-PC,
isoform C protein.
Length = 8648
Score = 25.8 bits (54), Expect = 8.0
Identities = 10/43 (23%), Positives = 25/43 (58%)
Frame = -2
Query: 130 VPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQ 2
V IS +RK+++ AK+ ++ +++ ++ +L + NT+
Sbjct: 784 VKEEISSDVRRKSTIKAKEEITVDDKKASSRRSSLAVEESNTE 826
>AE014135-135|AAS64599.1| 8930|Drosophila melanogaster CG32019-PD,
isoform D protein.
Length = 8930
Score = 25.8 bits (54), Expect = 8.0
Identities = 10/43 (23%), Positives = 25/43 (58%)
Frame = -2
Query: 130 VPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQ 2
V IS +RK+++ AK+ ++ +++ ++ +L + NT+
Sbjct: 996 VKEEISSDVRRKSTIKAKEEITVDDKKASSRRSSLAVEESNTE 1038
>AE014135-134|AAF59316.4| 8943|Drosophila melanogaster CG32019-PA,
isoform A protein.
Length = 8943
Score = 25.8 bits (54), Expect = 8.0
Identities = 10/43 (23%), Positives = 25/43 (58%)
Frame = -2
Query: 130 VPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQ 2
V IS +RK+++ AK+ ++ +++ ++ +L + NT+
Sbjct: 1020 VKEEISSDVRRKSTIKAKEEITVDDKKASSRRSSLAVEESNTE 1062
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,894,720
Number of Sequences: 53049
Number of extensions: 119661
Number of successful extensions: 629
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 24,988,368
effective HSP length: 40
effective length of database: 22,866,408
effective search space used: 434461752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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