Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc13m13
         (759 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745221-1|AAU93488.1|   95|Anopheles gambiae cytochrome P450 pr...    25   2.5  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    25   2.5  
AY752902-1|AAV30076.1|  106|Anopheles gambiae peroxidase 8 protein.    23   7.7  

>AY745221-1|AAU93488.1|   95|Anopheles gambiae cytochrome P450
           protein.
          Length = 95

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
 Frame = +1

Query: 322 CNLPIDEKAFCHCYHC----HCTVSMETATRKN 408
           C  PID K  C C+ C     C   ++  + KN
Sbjct: 10  CGDPIDIKLLCQCFTCDVVGSCAFGLQCNSLKN 42


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 12/46 (26%), Positives = 26/46 (56%)
 Frame = -3

Query: 502 NSLETLPSAANYGSLLKRLNLYNLDHIEMNVNFYELLFPLTLYNDN 365
           +++E + S  ++ +   RL   +L H E++   Y ++F + L ND+
Sbjct: 694 HTIEYILSTISHTASYLRLWALSLAHAELSEVLYNMVFTIGLRNDS 739


>AY752902-1|AAV30076.1|  106|Anopheles gambiae peroxidase 8 protein.
          Length = 106

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +2

Query: 185 VA*KVEFYNKHDHKVDLFKRAEH--VKSFAHIVEVFSAVLKIVTGQKYVIYQ 334
           +A  ++ +N++    ++F+RA H  +  + HI  V++  L    G+ Y++ Q
Sbjct: 25  IALDIQRFNRNLSNEEVFQRARHLNIAQYQHI--VYNEWLPNFLGRSYMLEQ 74


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 677,862
Number of Sequences: 2352
Number of extensions: 14044
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)