Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13l14
(647 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D87343-1|BAA23225.1| 297|Homo sapiens DCRA protein. 234 2e-61
BC110655-1|AAI10656.1| 297|Homo sapiens Down syndrome critical ... 234 2e-61
AJ001867-1|CAA05058.1| 254|Homo sapiens hypothetical protein pr... 163 5e-40
BC022505-1|AAH22505.1| 327|Homo sapiens vacuolar protein sortin... 46 9e-05
AL596223-4|CAH71501.1| 327|Homo sapiens vacuolar protein sortin... 46 9e-05
AL442635-2|CAH71779.1| 327|Homo sapiens vacuolar protein sortin... 46 9e-05
AK022992-1|BAB14351.1| 327|Homo sapiens protein ( Homo sapiens ... 46 9e-05
AF175266-1|AAF89954.1| 327|Homo sapiens vacuolar sorting protei... 46 9e-05
BC098386-1|AAH98386.1| 336|Homo sapiens vacuolar protein sortin... 46 1e-04
BC014128-1|AAH14128.1| 336|Homo sapiens vacuolar protein sortin... 46 1e-04
BC009747-1|AAH09747.1| 336|Homo sapiens vacuolar protein sortin... 46 1e-04
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 31 4.7
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 31 4.7
BC020172-1|AAH20172.1| 514|Homo sapiens zinc finger and BTB dom... 31 4.7
AL590413-2|CAI13589.1| 514|Homo sapiens zinc finger and BTB dom... 31 4.7
AF489528-1|AAM03124.1| 1394|Homo sapiens transforming growth fac... 31 4.7
AB040916-1|BAA96007.1| 428|Homo sapiens KIAA1483 protein protein. 31 4.7
BC130289-1|AAI30290.1| 1395|Homo sapiens latent transforming gro... 30 6.2
AC020594-1|AAY15036.1| 150|Homo sapiens unknown protein. 30 6.2
AB208801-1|BAD92038.1| 1348|Homo sapiens latent transforming gro... 30 6.2
U83867-1|AAB41498.1| 2477|Homo sapiens alpha II spectrin protein. 30 8.2
M24773-1|AAA52468.1| 920|Homo sapiens alpha-fodrin protein. 30 8.2
M18627-1|AAA51702.1| 920|Homo sapiens SPTAN1 protein. 30 8.2
J05243-1|AAA51790.1| 2472|Homo sapiens SPTAN1 protein. 30 8.2
BC053521-1|AAH53521.1| 2452|Homo sapiens SPTAN1 protein protein. 30 8.2
AL356481-4|CAH71405.1| 2472|Homo sapiens spectrin, alpha, non-er... 30 8.2
AL356481-3|CAH71404.1| 2477|Homo sapiens spectrin, alpha, non-er... 30 8.2
AB209860-1|BAD93097.1| 2506|Homo sapiens spectrin, alpha, non-er... 30 8.2
AB191262-1|BAD52438.1| 2452|Homo sapiens non-erythrocytic spectr... 30 8.2
>D87343-1|BAA23225.1| 297|Homo sapiens DCRA protein.
Length = 297
Score = 234 bits (572), Expect = 2e-61
Identities = 117/218 (53%), Positives = 145/218 (66%), Gaps = 5/218 (2%)
Frame = -2
Query: 640 PGKIPVGITEIPFEMPLRARQAVSPGYPGLLETYHGVFVNIMYTLKCNMKRSFLNKPLFT 461
PGK P G TEIPFE PL + G L ETYHGVFVNI YTL+C+MKRS L K L
Sbjct: 81 PGKFPSGKTEIPFEFPLHLK-----GNKVLYETYHGVFVNIQYTLRCDMKRSLLAKDLTK 135
Query: 460 TCQFFVQYRHQE-----RPVQKGVRCEMSGASVRAAGTVPHFSVFADLTSTVCALDAPVT 296
TC+F V Q+ PV + E +V+ +P F + L ST C + P+T
Sbjct: 136 TCEFIVHSAPQKGKFTPSPVDFTITPETL-QNVKERALLPKFLLRGHLNSTNCVITQPLT 194
Query: 295 GKIRVDECSVPIKSIELQLVRVETCGCADGYSRDATEIQNIQIGEGDVVRGRDIPLYMVL 116
G++ V+ I+S+ELQLVRVETCGCA+GY+RDATEIQNIQI +GDV RG +P+YMV
Sbjct: 195 GELVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRGLSVPIYMVF 254
Query: 115 PRLFTCPTTTTLNFKIEFELNIAVIFEDDYLVTENFPI 2
PRLFTCPT T NFK+EFE+NI V+ D+L+TENFP+
Sbjct: 255 PRLFTCPTLETTNFKVEFEVNIVVLLHPDHLITENFPL 292
>BC110655-1|AAI10656.1| 297|Homo sapiens Down syndrome critical
region gene 3 protein.
Length = 297
Score = 234 bits (572), Expect = 2e-61
Identities = 117/218 (53%), Positives = 145/218 (66%), Gaps = 5/218 (2%)
Frame = -2
Query: 640 PGKIPVGITEIPFEMPLRARQAVSPGYPGLLETYHGVFVNIMYTLKCNMKRSFLNKPLFT 461
PGK P G TEIPFE PL + G L ETYHGVFVNI YTL+C+MKRS L K L
Sbjct: 81 PGKFPSGKTEIPFEFPLHLK-----GNKVLYETYHGVFVNIQYTLRCDMKRSLLAKDLTK 135
Query: 460 TCQFFVQYRHQE-----RPVQKGVRCEMSGASVRAAGTVPHFSVFADLTSTVCALDAPVT 296
TC+F V Q+ PV + E +V+ +P F + L ST C + P+T
Sbjct: 136 TCEFIVHSAPQKGKFTPSPVDFTITPETL-QNVKERALLPKFLLRGHLNSTNCVITQPLT 194
Query: 295 GKIRVDECSVPIKSIELQLVRVETCGCADGYSRDATEIQNIQIGEGDVVRGRDIPLYMVL 116
G++ V+ I+S+ELQLVRVETCGCA+GY+RDATEIQNIQI +GDV RG +P+YMV
Sbjct: 195 GELVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRGLSVPIYMVF 254
Query: 115 PRLFTCPTTTTLNFKIEFELNIAVIFEDDYLVTENFPI 2
PRLFTCPT T NFK+EFE+NI V+ D+L+TENFP+
Sbjct: 255 PRLFTCPTLETTNFKVEFEVNIVVLLHPDHLITENFPL 292
>AJ001867-1|CAA05058.1| 254|Homo sapiens hypothetical protein
protein.
Length = 254
Score = 163 bits (396), Expect = 5e-40
Identities = 101/220 (45%), Positives = 121/220 (55%), Gaps = 7/220 (3%)
Frame = -2
Query: 640 PGKIPVGITEIPFEMPLRARQAVSPGYPGLLETYHGVFVNIMYTLKCNMKRSFLNKPLFT 461
PGK P G TEIPFE PL + G L ETYHGVFVNI YTL+C+MKRS L K L
Sbjct: 39 PGKFPSGKTEIPFEFPLHLK-----GNKVLYETYHGVFVNIQYTLRCDMKRSLLAKDLTK 93
Query: 460 TCQFFVQYRHQE-----RPVQKGVRCE-MSGASVRAAGTVPHFSVFADLTSTVCALDAPV 299
TC+F V Q+ PV + E + RA P F + A
Sbjct: 94 TCEFIVHSAPQKGKFTPSPVDFTIIPEPLQSVKERA---FPKFLLRRTSQLNKLCHHAAT 150
Query: 298 TGKIRVDEC-SVPIKSIELQLVRVETCGCADGYSRDATEIQNIQIGEGDVVRGRDIPLYM 122
G+ E S K R + C Y+RDATEIQNIQI +GDV RG +P+YM
Sbjct: 151 NGRAGGGELGSRHQKRGAAAGARGDVRVCRS-YARDATEIQNIQIADGDVCRGLSVPIYM 209
Query: 121 VLPRLFTCPTTTTLNFKIEFELNIAVIFEDDYLVTENFPI 2
V PRLFTCPT T NFK+EFE+NI V+ D+L+TENFP+
Sbjct: 210 VSPRLFTCPTQETTNFKVEFEVNIVVLLHPDHLITENFPL 249
>BC022505-1|AAH22505.1| 327|Homo sapiens vacuolar protein sorting
26 homolog A (S. pombe) protein.
Length = 327
Score = 46.4 bits (105), Expect = 9e-05
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = -2
Query: 301 VTGKIRVDECSVPIKSIELQLVRVETCGCADGYSRDATEIQNIQIGEGDVVRGRDIPLYM 122
+ GKI + I+ +ELQL++ E G + + I +I +G V+G IP+ +
Sbjct: 191 IVGKIYFLLVRIKIQHMELQLIKKEITGIGPSTTTETETIAKYEIMDGAPVKGESIPIRL 250
Query: 121 VLPRLFTCPTTTTLN--FKIEFELNIAVIFEDD 29
L PT +N F + + LN+ ++ E+D
Sbjct: 251 FLAGYDPTPTMRDVNKKFSVRYFLNLVLVDEED 283
>AL596223-4|CAH71501.1| 327|Homo sapiens vacuolar protein sorting
26 homolog A (S. pombe) protein.
Length = 327
Score = 46.4 bits (105), Expect = 9e-05
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = -2
Query: 301 VTGKIRVDECSVPIKSIELQLVRVETCGCADGYSRDATEIQNIQIGEGDVVRGRDIPLYM 122
+ GKI + I+ +ELQL++ E G + + I +I +G V+G IP+ +
Sbjct: 191 IVGKIYFLLVRIKIQHMELQLIKKEITGIGPSTTTETETIAKYEIMDGAPVKGESIPIRL 250
Query: 121 VLPRLFTCPTTTTLN--FKIEFELNIAVIFEDD 29
L PT +N F + + LN+ ++ E+D
Sbjct: 251 FLAGYDPTPTMRDVNKKFSVRYFLNLVLVDEED 283
>AL442635-2|CAH71779.1| 327|Homo sapiens vacuolar protein sorting
26 homolog A (S. pombe) protein.
Length = 327
Score = 46.4 bits (105), Expect = 9e-05
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = -2
Query: 301 VTGKIRVDECSVPIKSIELQLVRVETCGCADGYSRDATEIQNIQIGEGDVVRGRDIPLYM 122
+ GKI + I+ +ELQL++ E G + + I +I +G V+G IP+ +
Sbjct: 191 IVGKIYFLLVRIKIQHMELQLIKKEITGIGPSTTTETETIAKYEIMDGAPVKGESIPIRL 250
Query: 121 VLPRLFTCPTTTTLN--FKIEFELNIAVIFEDD 29
L PT +N F + + LN+ ++ E+D
Sbjct: 251 FLAGYDPTPTMRDVNKKFSVRYFLNLVLVDEED 283
>AK022992-1|BAB14351.1| 327|Homo sapiens protein ( Homo sapiens
cDNA FLJ12930 fis, clone NT2RP2004816, highly similar to
H58 PROTEIN. ).
Length = 327
Score = 46.4 bits (105), Expect = 9e-05
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = -2
Query: 301 VTGKIRVDECSVPIKSIELQLVRVETCGCADGYSRDATEIQNIQIGEGDVVRGRDIPLYM 122
+ GKI + I+ +ELQL++ E G + + I +I +G V+G IP+ +
Sbjct: 191 IVGKIYFLLVRIKIQHMELQLIKKEITGIGPSTTTETETIAKYEIMDGAPVKGESIPIRL 250
Query: 121 VLPRLFTCPTTTTLN--FKIEFELNIAVIFEDD 29
L PT +N F + + LN+ ++ E+D
Sbjct: 251 FLAGYDPTPTMRDVNKKFSVRYFLNLVLVDEED 283
>AF175266-1|AAF89954.1| 327|Homo sapiens vacuolar sorting protein
26 protein.
Length = 327
Score = 46.4 bits (105), Expect = 9e-05
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = -2
Query: 301 VTGKIRVDECSVPIKSIELQLVRVETCGCADGYSRDATEIQNIQIGEGDVVRGRDIPLYM 122
+ GKI + I+ +ELQL++ E G + + I +I +G V+G IP+ +
Sbjct: 191 IVGKIYFLLVRIKIQHMELQLIKKEITGIGPSTTTETETIAKYEIMDGAPVKGESIPIRL 250
Query: 121 VLPRLFTCPTTTTLN--FKIEFELNIAVIFEDD 29
L PT +N F + + LN+ ++ E+D
Sbjct: 251 FLAGYDPTPTMRDVNKKFSVRYFLNLVLVDEED 283
>BC098386-1|AAH98386.1| 336|Homo sapiens vacuolar protein sorting
26 homolog B (S. pombe) protein.
Length = 336
Score = 46.0 bits (104), Expect = 1e-04
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = -2
Query: 301 VTGKIRVDECSVPIKSIELQLVRVETCGCADGYSRDATEIQNIQIGEGDVVRGRDIPLYM 122
+ GKI + IK +E+ +++ ET G + I +I +G VRG IP+ +
Sbjct: 189 IVGKIYFLLVRIKIKHMEIDIIKRETTGTGPNVYHENDTIAKYEIMDGAPVRGESIPIRL 248
Query: 121 VLPRLFTCPTTTTLN--FKIEFELNIAVIFEDD 29
L PT +N F + + LN+ +I E++
Sbjct: 249 FLAGYELTPTMRDINKKFSVRYYLNLVLIDEEE 281
>BC014128-1|AAH14128.1| 336|Homo sapiens vacuolar protein sorting
26 homolog B (S. pombe) protein.
Length = 336
Score = 46.0 bits (104), Expect = 1e-04
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = -2
Query: 301 VTGKIRVDECSVPIKSIELQLVRVETCGCADGYSRDATEIQNIQIGEGDVVRGRDIPLYM 122
+ GKI + IK +E+ +++ ET G + I +I +G VRG IP+ +
Sbjct: 189 IVGKIYFLLVRIKIKHMEIDIIKRETTGTGPNVYHENDTIAKYEIMDGAPVRGESIPIRL 248
Query: 121 VLPRLFTCPTTTTLN--FKIEFELNIAVIFEDD 29
L PT +N F + + LN+ +I E++
Sbjct: 249 FLAGYELTPTMRDINKKFSVRYYLNLVLIDEEE 281
>BC009747-1|AAH09747.1| 336|Homo sapiens vacuolar protein sorting
26 homolog B (S. pombe) protein.
Length = 336
Score = 46.0 bits (104), Expect = 1e-04
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = -2
Query: 301 VTGKIRVDECSVPIKSIELQLVRVETCGCADGYSRDATEIQNIQIGEGDVVRGRDIPLYM 122
+ GKI + IK +E+ +++ ET G + I +I +G VRG IP+ +
Sbjct: 189 IVGKIYFLLVRIKIKHMEIDIIKRETTGTGPNVYHENDTIAKYEIMDGAPVRGESIPIRL 248
Query: 121 VLPRLFTCPTTTTLN--FKIEFELNIAVIFEDD 29
L PT +N F + + LN+ +I E++
Sbjct: 249 FLAGYELTPTMRDINKKFSVRYYLNLVLIDEEE 281
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/87 (26%), Positives = 39/87 (44%)
Frame = +3
Query: 138 SRPRTTSPSPIWIFWISVASLE*PSAQPHVSTRTNCSSMDLMGTEHSSTLIFPVTGASNA 317
S P T P+WI + + P+ ST T S + GT H++ ++ T
Sbjct: 3223 SSPGTALTPPVWISTTTTPTTTTPTTSG--STVTPSS---IPGTTHTARVLTTTTTTVAT 3277
Query: 318 QTVEVRSANTEKCGTVPAARTDAPDIS 398
++ S++T+ GT P+ T A I+
Sbjct: 3278 GSMATPSSSTQTSGTPPSLTTTATTIT 3304
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 30.7 bits (66), Expect = 4.7
Identities = 23/87 (26%), Positives = 39/87 (44%)
Frame = +3
Query: 138 SRPRTTSPSPIWIFWISVASLE*PSAQPHVSTRTNCSSMDLMGTEHSSTLIFPVTGASNA 317
S P T P+WI + + P+ ST T S + GT H++ ++ T
Sbjct: 438 SSPGTALTPPVWISTTTTPTTTTPTTSG--STVTPSS---IPGTTHTARVLTTTTTTVAT 492
Query: 318 QTVEVRSANTEKCGTVPAARTDAPDIS 398
++ S++T+ GT P+ T A I+
Sbjct: 493 GSMATPSSSTQTSGTPPSLTTTATTIT 519
>BC020172-1|AAH20172.1| 514|Homo sapiens zinc finger and BTB domain
containing 2 protein.
Length = 514
Score = 30.7 bits (66), Expect = 4.7
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = -3
Query: 462 PLASSLYSIDIKNAQYRRVCGARCPVRRCALRAQCRTSLCSQISPPPSARWMHLSLERSE 283
PLASSLY I I + Q R+ + + +TS SQ P +++ L+ ++
Sbjct: 127 PLASSLYGIQIADHQLRQATKIASAPEKLGRDPRPQTSRISQEQVPEASQLSQLTSNLAQ 186
Query: 282 LTSARY-PSSPL 250
+ PS PL
Sbjct: 187 VNRTNMTPSDPL 198
>AL590413-2|CAI13589.1| 514|Homo sapiens zinc finger and BTB domain
containing 2 protein.
Length = 514
Score = 30.7 bits (66), Expect = 4.7
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = -3
Query: 462 PLASSLYSIDIKNAQYRRVCGARCPVRRCALRAQCRTSLCSQISPPPSARWMHLSLERSE 283
PLASSLY I I + Q R+ + + +TS SQ P +++ L+ ++
Sbjct: 127 PLASSLYGIQIADHQLRQATKIASAPEKLGRDPRPQTSRISQEQVPEASQLSQLTSNLAQ 186
Query: 282 LTSARY-PSSPL 250
+ PS PL
Sbjct: 187 VNRTNMTPSDPL 198
>AF489528-1|AAM03124.1| 1394|Homo sapiens transforming growth
factor-beta binding protein-1S protein.
Length = 1394
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -2
Query: 292 KIRVDECSVPIKSIELQLVRVE---TCGCADGYSRDATEIQNIQIGEGDVVRGR 140
+++ +EC + + VRV+ TC C DGY D ++ + + E D + R
Sbjct: 1292 ELQAEECGILNGCENGRCVRVQEGYTCDCLDGYHLDTAKMTCVDVNECDELNNR 1345
>AB040916-1|BAA96007.1| 428|Homo sapiens KIAA1483 protein protein.
Length = 428
Score = 30.7 bits (66), Expect = 4.7
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = -3
Query: 462 PLASSLYSIDIKNAQYRRVCGARCPVRRCALRAQCRTSLCSQISPPPSARWMHLSLERSE 283
PLASSLY I I + Q R+ + + +TS SQ P +++ L+ ++
Sbjct: 41 PLASSLYGIQIADHQLRQATKIASAPEKLGRDPRPQTSRISQEQVPEASQLSQLTSNLAQ 100
Query: 282 LTSARY-PSSPL 250
+ PS PL
Sbjct: 101 VNRTNMTPSDPL 112
>BC130289-1|AAI30290.1| 1395|Homo sapiens latent transforming growth
factor beta binding protein 1 protein.
Length = 1395
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -2
Query: 292 KIRVDECSVPIKSIELQLVRVE---TCGCADGYSRDATEIQNIQIGEGDVVRGR 140
+++ +EC + + VRV+ TC C DGY D ++ + + E D + R
Sbjct: 1293 ELQAEECGILNGCENGRCVRVQEGYTCDCFDGYHLDTAKMTCVDVNECDELNNR 1346
>AC020594-1|AAY15036.1| 150|Homo sapiens unknown protein.
Length = 150
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -2
Query: 292 KIRVDECSVPIKSIELQLVRVE---TCGCADGYSRDATEIQNIQIGEGDVVRGR 140
+++ +EC + + VRV+ TC C DGY D ++ + + E D + R
Sbjct: 48 ELQAEECGILNGCENGRCVRVQEGYTCDCFDGYHLDTAKMTCVDVNECDELNNR 101
>AB208801-1|BAD92038.1| 1348|Homo sapiens latent transforming growth
factor beta binding protein 1 isoform LTBP-1S varian
protein.
Length = 1348
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -2
Query: 292 KIRVDECSVPIKSIELQLVRVE---TCGCADGYSRDATEIQNIQIGEGDVVRGR 140
+++ +EC + + VRV+ TC C DGY D ++ + + E D + R
Sbjct: 1246 ELQAEECGILNGCENGRCVRVQEGYTCDCFDGYHLDTAKMTCVDVNECDELNNR 1299
>U83867-1|AAB41498.1| 2477|Homo sapiens alpha II spectrin protein.
Length = 2477
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 262 IKSIELQLVRVETCGCADGYSRDATEIQNIQ 170
++ IEL L VE +D Y +D T +QN+Q
Sbjct: 687 VEDIELWLYEVEGHLASDDYGKDLTNVQNLQ 717
>M24773-1|AAA52468.1| 920|Homo sapiens alpha-fodrin protein.
Length = 920
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 262 IKSIELQLVRVETCGCADGYSRDATEIQNIQ 170
++ IEL L VE +D Y +D T +QN+Q
Sbjct: 12 VEDIELWLYEVEGHLASDDYGKDLTNVQNLQ 42
>M18627-1|AAA51702.1| 920|Homo sapiens SPTAN1 protein.
Length = 920
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 262 IKSIELQLVRVETCGCADGYSRDATEIQNIQ 170
++ IEL L VE +D Y +D T +QN+Q
Sbjct: 12 VEDIELWLYEVEGHLASDDYGKDLTNVQNLQ 42
>J05243-1|AAA51790.1| 2472|Homo sapiens SPTAN1 protein.
Length = 2472
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 262 IKSIELQLVRVETCGCADGYSRDATEIQNIQ 170
++ IEL L VE +D Y +D T +QN+Q
Sbjct: 687 VEDIELWLYEVEGHLASDDYGKDLTNVQNLQ 717
>BC053521-1|AAH53521.1| 2452|Homo sapiens SPTAN1 protein protein.
Length = 2452
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 262 IKSIELQLVRVETCGCADGYSRDATEIQNIQ 170
++ IEL L VE +D Y +D T +QN+Q
Sbjct: 687 VEDIELWLYEVEGHLASDDYGKDLTNVQNLQ 717
>AL356481-4|CAH71405.1| 2472|Homo sapiens spectrin, alpha,
non-erythrocytic 1 (alpha-fodrin) protein.
Length = 2472
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 262 IKSIELQLVRVETCGCADGYSRDATEIQNIQ 170
++ IEL L VE +D Y +D T +QN+Q
Sbjct: 687 VEDIELWLYEVEGHLASDDYGKDLTNVQNLQ 717
>AL356481-3|CAH71404.1| 2477|Homo sapiens spectrin, alpha,
non-erythrocytic 1 (alpha-fodrin) protein.
Length = 2477
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 262 IKSIELQLVRVETCGCADGYSRDATEIQNIQ 170
++ IEL L VE +D Y +D T +QN+Q
Sbjct: 687 VEDIELWLYEVEGHLASDDYGKDLTNVQNLQ 717
>AB209860-1|BAD93097.1| 2506|Homo sapiens spectrin, alpha,
non-erythrocytic 1 (alpha-fodrin) variant protein.
Length = 2506
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 262 IKSIELQLVRVETCGCADGYSRDATEIQNIQ 170
++ IEL L VE +D Y +D T +QN+Q
Sbjct: 721 VEDIELWLYEVEGHLASDDYGKDLTNVQNLQ 751
>AB191262-1|BAD52438.1| 2452|Homo sapiens non-erythrocytic spectrin
alpha protein.
Length = 2452
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 262 IKSIELQLVRVETCGCADGYSRDATEIQNIQ 170
++ IEL L VE +D Y +D T +QN+Q
Sbjct: 687 VEDIELWLYEVEGHLASDDYGKDLTNVQNLQ 717
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,182,932
Number of Sequences: 237096
Number of extensions: 2473623
Number of successful extensions: 10662
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 10138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10650
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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