Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc13l10
         (381 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L42452-1|AAC42011.1|  406|Homo sapiens pyruvate dehydrogenase ki...    31   0.94 
BC015948-1|AAH15948.1|  406|Homo sapiens pyruvate dehydrogenase ...    31   0.94 
L42450-1|AAC42009.1|  436|Homo sapiens pyruvate dehydrogenase ki...    31   1.2  
DQ234350-1|ABB29979.1|  456|Homo sapiens mitochondrial pyruvate ...    31   1.2  
BC039158-1|AAH39158.1|  436|Homo sapiens PDK1 protein protein.         31   1.2  
AC093818-1|AAY14915.1|  390|Homo sapiens unknown protein.              31   1.2  
BC101481-1|AAI01482.1|  715|Homo sapiens EPS8L2 protein protein.       30   2.9  
BC093878-1|AAH93878.1|  715|Homo sapiens EPS8L2 protein protein.       30   2.9  
BC080636-1|AAH80636.1|  715|Homo sapiens EPS8L2 protein protein.       30   2.9  
AY074929-1|AAL76118.1|  715|Homo sapiens epidermal growth factor...    30   2.9  
AK222903-1|BAD96623.1|  715|Homo sapiens epidermal growth factor...    30   2.9  
AK025824-1|BAB15248.1|  715|Homo sapiens protein ( Homo sapiens ...    30   2.9  
AK025588-1|BAB15180.1|  743|Homo sapiens protein ( Homo sapiens ...    30   2.9  
L42451-1|AAC42010.1|  407|Homo sapiens pyruvate dehydrogenase ki...    29   3.8  
BC063137-1|AAH63137.1|  407|Homo sapiens pyruvate dehydrogenase ...    29   3.8  
BC040478-1|AAH40478.1|  407|Homo sapiens pyruvate dehydrogenase ...    29   3.8  
BC005811-1|AAH05811.1|  407|Homo sapiens pyruvate dehydrogenase ...    29   3.8  

>L42452-1|AAC42011.1|  406|Homo sapiens pyruvate dehydrogenase
          kinase protein.
          Length = 406

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = -3

Query: 61 VTKMLDFYSQFNPSPLSIKQ 2
          V K ++ YS+F+PSPLSIKQ
Sbjct: 12 VPKQIERYSRFSPSPLSIKQ 31


>BC015948-1|AAH15948.1|  406|Homo sapiens pyruvate dehydrogenase
          kinase, isozyme 3 protein.
          Length = 406

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = -3

Query: 61 VTKMLDFYSQFNPSPLSIKQ 2
          V K ++ YS+F+PSPLSIKQ
Sbjct: 12 VPKQIERYSRFSPSPLSIKQ 31


>L42450-1|AAC42009.1|  436|Homo sapiens pyruvate dehydrogenase
           kinase protein.
          Length = 436

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = -3

Query: 61  VTKMLDFYSQFNPSPLSIKQ 2
           V   +DFY++F+PSPLS+KQ
Sbjct: 42  VPGQVDFYARFSPSPLSMKQ 61


>DQ234350-1|ABB29979.1|  456|Homo sapiens mitochondrial pyruvate
           dehydrogenase kinase isoenzyme 1 protein.
          Length = 456

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = -3

Query: 61  VTKMLDFYSQFNPSPLSIKQ 2
           V   +DFY++F+PSPLS+KQ
Sbjct: 42  VPGQVDFYARFSPSPLSMKQ 61


>BC039158-1|AAH39158.1|  436|Homo sapiens PDK1 protein protein.
          Length = 436

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = -3

Query: 61  VTKMLDFYSQFNPSPLSIKQ 2
           V   +DFY++F+PSPLS+KQ
Sbjct: 42  VPGQVDFYARFSPSPLSMKQ 61


>AC093818-1|AAY14915.1|  390|Homo sapiens unknown protein.
          Length = 390

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = -3

Query: 61  VTKMLDFYSQFNPSPLSIKQ 2
           V   +DFY++F+PSPLS+KQ
Sbjct: 42  VPGQVDFYARFSPSPLSMKQ 61


>BC101481-1|AAI01482.1|  715|Homo sapiens EPS8L2 protein protein.
          Length = 715

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 90  ILKVSRKNI*VLEK*YNNFNVIIHNHNRL*HIFHLSEFLL 209
           + K+S K++    K Y+N NVI+H  ++  H+ HL+ F++
Sbjct: 24  VAKMSPKDLFEQRKKYSNSNVIMHETSQY-HVQHLATFIM 62


>BC093878-1|AAH93878.1|  715|Homo sapiens EPS8L2 protein protein.
          Length = 715

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 90  ILKVSRKNI*VLEK*YNNFNVIIHNHNRL*HIFHLSEFLL 209
           + K+S K++    K Y+N NVI+H  ++  H+ HL+ F++
Sbjct: 24  VAKMSPKDLFEQRKKYSNSNVIMHETSQY-HVQHLATFIM 62


>BC080636-1|AAH80636.1|  715|Homo sapiens EPS8L2 protein protein.
          Length = 715

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 90  ILKVSRKNI*VLEK*YNNFNVIIHNHNRL*HIFHLSEFLL 209
           + K+S K++    K Y+N NVI+H  ++  H+ HL+ F++
Sbjct: 24  VAKMSPKDLFEQRKKYSNSNVIMHETSQY-HVQHLATFIM 62


>AY074929-1|AAL76118.1|  715|Homo sapiens epidermal growth factor
           receptor pathway substrate 8 related protein 2 protein.
          Length = 715

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 90  ILKVSRKNI*VLEK*YNNFNVIIHNHNRL*HIFHLSEFLL 209
           + K+S K++    K Y+N NVI+H  ++  H+ HL+ F++
Sbjct: 24  VAKMSPKDLFEQRKKYSNSNVIMHETSQY-HVQHLATFIM 62


>AK222903-1|BAD96623.1|  715|Homo sapiens epidermal growth factor
           receptor pathway substrate 8-like protein 2 variant
           protein.
          Length = 715

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 90  ILKVSRKNI*VLEK*YNNFNVIIHNHNRL*HIFHLSEFLL 209
           + K+S K++    K Y+N NVI+H  ++  H+ HL+ F++
Sbjct: 24  VAKMSPKDLFEQRKKYSNSNVIMHETSQY-HVQHLATFIM 62


>AK025824-1|BAB15248.1|  715|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22171 fis, clone HRC00654. ).
          Length = 715

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 90  ILKVSRKNI*VLEK*YNNFNVIIHNHNRL*HIFHLSEFLL 209
           + K+S K++    K Y+N NVI+H  ++  H+ HL+ F++
Sbjct: 24  VAKMSPKDLFEQRKKYSNSNVIMHETSQY-HVQHLATFIM 62


>AK025588-1|BAB15180.1|  743|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21935 fis, clone HEP04373. ).
          Length = 743

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 90  ILKVSRKNI*VLEK*YNNFNVIIHNHNRL*HIFHLSEFLL 209
           + K+S K++    K Y+N NVI+H  ++  H+ HL+ F++
Sbjct: 52  VAKMSPKDLFEQRKKYSNSNVIMHETSQY-HVQHLATFIM 90


>L42451-1|AAC42010.1|  407|Homo sapiens pyruvate dehydrogenase
          kinase protein.
          Length = 407

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 85 LAGAIFTNVTKMLDFYSQFNPSPLSIKQ 2
          L  A      K ++ +S+F+PSPLS+KQ
Sbjct: 8  LKNASLAGAPKYIEHFSKFSPSPLSMKQ 35


>BC063137-1|AAH63137.1|  407|Homo sapiens pyruvate dehydrogenase
          kinase, isozyme 2 protein.
          Length = 407

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 85 LAGAIFTNVTKMLDFYSQFNPSPLSIKQ 2
          L  A      K ++ +S+F+PSPLS+KQ
Sbjct: 8  LKNASLAGAPKYIEHFSKFSPSPLSMKQ 35


>BC040478-1|AAH40478.1|  407|Homo sapiens pyruvate dehydrogenase
          kinase, isozyme 2 protein.
          Length = 407

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 85 LAGAIFTNVTKMLDFYSQFNPSPLSIKQ 2
          L  A      K ++ +S+F+PSPLS+KQ
Sbjct: 8  LKNASLAGAPKYIEHFSKFSPSPLSMKQ 35


>BC005811-1|AAH05811.1|  407|Homo sapiens pyruvate dehydrogenase
          kinase, isozyme 2 protein.
          Length = 407

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 85 LAGAIFTNVTKMLDFYSQFNPSPLSIKQ 2
          L  A      K ++ +S+F+PSPLS+KQ
Sbjct: 8  LKNASLAGAPKYIEHFSKFSPSPLSMKQ 35


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,372,329
Number of Sequences: 237096
Number of extensions: 769635
Number of successful extensions: 1106
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)