Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc13l09
         (673 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003245-1|AAO25002.1|  709|Drosophila melanogaster LD36812p pro...    29   4.4  
AE014297-3647|AAS65213.1|  665|Drosophila melanogaster CG7012-PB...    29   4.4  
AE014297-3646|AAF56349.2|  695|Drosophila melanogaster CG7012-PA...    29   4.4  
BT010284-1|AAQ23602.1| 2727|Drosophila melanogaster LP05936p pro...    29   7.6  
AE014134-1818|AAF52899.1| 2727|Drosophila melanogaster CG5604-PA...    29   7.6  

>BT003245-1|AAO25002.1|  709|Drosophila melanogaster LD36812p
           protein.
          Length = 709

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -3

Query: 530 SAMLLNYKKSNKNVPNIKFDLKNLSFMLENTDKIDIIQFDDVKNY 396
           +A++LN + +NK   +I  D  N+ F   NT K D  Q  +V ++
Sbjct: 446 NALILNARPTNKYYHSIYDDADNVDFTYANTSK-DFTQLTEVNDF 489


>AE014297-3647|AAS65213.1|  665|Drosophila melanogaster CG7012-PB,
           isoform B protein.
          Length = 665

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -3

Query: 530 SAMLLNYKKSNKNVPNIKFDLKNLSFMLENTDKIDIIQFDDVKNY 396
           +A++LN + +NK   +I  D  N+ F   NT K D  Q  +V ++
Sbjct: 402 NALILNARPTNKYYHSIYDDADNVDFTYANTSK-DFTQLTEVNDF 445


>AE014297-3646|AAF56349.2|  695|Drosophila melanogaster CG7012-PA,
           isoform A protein.
          Length = 695

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -3

Query: 530 SAMLLNYKKSNKNVPNIKFDLKNLSFMLENTDKIDIIQFDDVKNY 396
           +A++LN + +NK   +I  D  N+ F   NT K D  Q  +V ++
Sbjct: 432 NALILNARPTNKYYHSIYDDADNVDFTYANTSK-DFTQLTEVNDF 475


>BT010284-1|AAQ23602.1| 2727|Drosophila melanogaster LP05936p protein.
          Length = 2727

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = -3

Query: 635  QKMIINELLFLNDNVNYATNKLFSKDQANGELQKLSAMLLNYKK 504
            Q++ + +   L DNV  ATNK  +K  A+  +QKL ++L + +K
Sbjct: 992  QRVSVFKKCILEDNVESATNKPRTKSTASILIQKLVSVLESTEK 1035


>AE014134-1818|AAF52899.1| 2727|Drosophila melanogaster CG5604-PA
            protein.
          Length = 2727

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = -3

Query: 635  QKMIINELLFLNDNVNYATNKLFSKDQANGELQKLSAMLLNYKK 504
            Q++ + +   L DNV  ATNK  +K  A+  +QKL ++L + +K
Sbjct: 992  QRVSVFKKCILEDNVESATNKPRTKSTASILIQKLVSVLESTEK 1035


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,134,969
Number of Sequences: 53049
Number of extensions: 526818
Number of successful extensions: 1174
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)