Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13l06
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical ... 50 1e-06
U97550-3|AAK18981.2| 423|Caenorhabditis elegans Hypothetical pr... 36 0.020
AC006761-5|AAF60550.3| 425|Caenorhabditis elegans Hypothetical ... 36 0.026
U67950-2|AAP13772.1| 147|Caenorhabditis elegans Hypothetical pr... 34 0.079
U67950-1|AAP13771.1| 465|Caenorhabditis elegans Hypothetical pr... 34 0.079
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 32 0.42
U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor... 31 0.74
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 31 0.74
U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor... 31 0.74
AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anch... 31 0.74
Z49969-2|CAA90270.1| 564|Caenorhabditis elegans Hypothetical pr... 31 0.98
AF067947-7|AAK68397.2| 295|Caenorhabditis elegans Hypothetical ... 31 0.98
AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical ... 31 0.98
U23523-4|AAC46557.1| 83|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF039710-10|AAB96693.2| 393|Caenorhabditis elegans Hypothetical... 30 1.7
AC024791-3|AAF60673.1| 468|Caenorhabditis elegans Hypothetical ... 29 2.3
U49830-12|AAL16311.1| 363|Caenorhabditis elegans Hypothetical p... 29 3.0
Z68341-3|CAA92766.2| 269|Caenorhabditis elegans Hypothetical pr... 29 3.9
U70846-2|ABI18146.1| 647|Caenorhabditis elegans Hypothetical pr... 29 3.9
U70846-1|AAB09104.4| 510|Caenorhabditis elegans Hypothetical pr... 29 3.9
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 29 3.9
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 3.9
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 29 3.9
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 3.9
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 3.9
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 29 3.9
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 3.9
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 28 5.2
AF098993-7|ABN43095.1| 525|Caenorhabditis elegans Hypothetical ... 28 5.2
AF098993-6|AAC67469.2| 562|Caenorhabditis elegans Hypothetical ... 28 5.2
Z29560-9|CAA82661.3| 148|Caenorhabditis elegans Hypothetical pr... 28 6.9
U70845-2|AAB09100.1| 102|Caenorhabditis elegans Hypothetical pr... 28 6.9
AC024841-3|AAK68542.1| 185|Caenorhabditis elegans Hypothetical ... 28 6.9
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 27 9.1
U23523-5|AAC46556.1| 77|Caenorhabditis elegans Hypothetical pr... 27 9.1
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 27 9.1
>AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical
protein Y111B2A.8 protein.
Length = 582
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = -3
Query: 663 EKLQKCRSSITLYEALEVIVRTESHRLLLVNKDDMLIGIVSLSDIL 526
E +Q C + +L++ LE IV+ E HRL++ ++D ++G+VSLSDIL
Sbjct: 455 EGVQTCLETDSLFQVLEAIVKAEVHRLIVTDQDKKVVGVVSLSDIL 500
>U97550-3|AAK18981.2| 423|Caenorhabditis elegans Hypothetical
protein T20F7.6 protein.
Length = 423
Score = 36.3 bits (80), Expect = 0.020
Identities = 15/50 (30%), Positives = 32/50 (64%)
Frame = -3
Query: 666 EEKLQKCRSSITLYEALEVIVRTESHRLLLVNKDDMLIGIVSLSDILVYL 517
+E++ R + + ++A+ V+V HRL VN+ + G++SLSD++ ++
Sbjct: 302 DERVVSVRDNESFWKAVNVLVDHNVHRLCAVNEHGGIEGVISLSDVINFM 351
>AC006761-5|AAF60550.3| 425|Caenorhabditis elegans Hypothetical
protein Y41G9A.3 protein.
Length = 425
Score = 35.9 bits (79), Expect = 0.026
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = -3
Query: 633 TLYEALEVIVRTESHRLLLVNKDDMLIGIVSLSDILVYL 517
TL+ +E+ + HR+ +V+ +L GI+SLSD++ +L
Sbjct: 369 TLWSLIEIFIDKNVHRIFMVDDRTILKGIISLSDVIEFL 407
>U67950-2|AAP13772.1| 147|Caenorhabditis elegans Hypothetical
protein T01B6.3b protein.
Length = 147
Score = 34.3 bits (75), Expect = 0.079
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = -3
Query: 666 EEKLQKCRSSITLYEALEVIVRTESHRLLLVNKDDMLIGIVSLSDILVYLNRI--IPSEK 493
+ +L RSS T++E + ++ ++ L ++++ ++ +VS SDIL Y+ P+E
Sbjct: 72 QSRLVYGRSSYTVFETVAKMMTSDKSSLPIIDEGKRILAVVSCSDILSYIQTAERTPTED 131
Query: 492 KISS 481
+ SS
Sbjct: 132 RSSS 135
>U67950-1|AAP13771.1| 465|Caenorhabditis elegans Hypothetical
protein T01B6.3a protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.079
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = -3
Query: 666 EEKLQKCRSSITLYEALEVIVRTESHRLLLVNKDDMLIGIVSLSDILVYLNRI--IPSEK 493
+ +L RSS T++E + ++ ++ L ++++ ++ +VS SDIL Y+ P+E
Sbjct: 390 QSRLVYGRSSYTVFETVAKMMTSDKSSLPIIDEGKRILAVVSCSDILSYIQTAERTPTED 449
Query: 492 KISS 481
+ SS
Sbjct: 450 RSSS 453
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical
protein W06A7.3f protein.
Length = 2488
Score = 31.9 bits (69), Expect = 0.42
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Frame = -3
Query: 486 SSLQEIFRPLEENKVPESSKENESDTISIEVPVLGNQAVPEVNEEKTAE----NDDTGEV 319
S +EIF K E++ + E+DT +P G + PE N EK E ND+T E+
Sbjct: 676 SQTEEIFTDDNVKKSKENTPKAENDTEINYLP--GGEEGPEDNAEKRNEAVSPNDETSEI 733
Query: 318 SCNVECVD-AETTADGNVE 265
++E ++ + D NV+
Sbjct: 734 KQDLENLENGASGPDNNVQ 752
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical
protein W06A7.3c protein.
Length = 2484
Score = 31.9 bits (69), Expect = 0.42
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Frame = -3
Query: 486 SSLQEIFRPLEENKVPESSKENESDTISIEVPVLGNQAVPEVNEEKTAE----NDDTGEV 319
S +EIF K E++ + E+DT +P G + PE N EK E ND+T E+
Sbjct: 676 SQTEEIFTDDNVKKSKENTPKAENDTEINYLP--GGEEGPEDNAEKRNEAVSPNDETSEI 733
Query: 318 SCNVECVD-AETTADGNVE 265
++E ++ + D NV+
Sbjct: 734 KQDLENLENGASGPDNNVQ 752
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical
protein W06A7.3a protein.
Length = 2607
Score = 31.9 bits (69), Expect = 0.42
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Frame = -3
Query: 486 SSLQEIFRPLEENKVPESSKENESDTISIEVPVLGNQAVPEVNEEKTAE----NDDTGEV 319
S +EIF K E++ + E+DT +P G + PE N EK E ND+T E+
Sbjct: 676 SQTEEIFTDDNVKKSKENTPKAENDTEINYLP--GGEEGPEDNAEKRNEAVSPNDETSEI 733
Query: 318 SCNVECVD-AETTADGNVE 265
++E ++ + D NV+
Sbjct: 734 KQDLENLENGASGPDNNVQ 752
>U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor
protein protein1, isoform c protein.
Length = 605
Score = 31.1 bits (67), Expect = 0.74
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = -3
Query: 456 EENKVPESSKENESDTISIEVPVLGNQAVPEVNEEKTAENDDTGEVSCNVECVDA-ETTA 280
+E PE++ ++ ++ S E P G+Q+ VN E+ EN + E C V VDA
Sbjct: 423 QETLSPETA-DSSTNKNSDEFPDEGSQSEASVNNEEVLENVEHVEDECTV--VDAVNENT 479
Query: 279 DGNVEKSLENDICN 238
D ++E++ E + N
Sbjct: 480 DSSIEENDEENTEN 493
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 31.1 bits (67), Expect = 0.74
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = -3
Query: 456 EENKVPESSKENESDTISIEVPVLGNQAVPEVNEEKTAENDDTGEVSCNVECVDA-ETTA 280
+E PE++ ++ ++ S E P G+Q+ VN E+ EN + E C V VDA
Sbjct: 423 QETLSPETA-DSSTNKNSDEFPDEGSQSEASVNNEEVLENVEHVEDECTV--VDAVNENT 479
Query: 279 DGNVEKSLENDICN 238
D ++E++ E + N
Sbjct: 480 DSSIEENDEENTEN 493
>U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein1, isoform a protein.
Length = 1280
Score = 31.1 bits (67), Expect = 0.74
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = -3
Query: 456 EENKVPESSKENESDTISIEVPVLGNQAVPEVNEEKTAENDDTGEVSCNVECVDA-ETTA 280
+E PE++ ++ ++ S E P G+Q+ VN E+ EN + E C V VDA
Sbjct: 423 QETLSPETA-DSSTNKNSDEFPDEGSQSEASVNNEEVLENVEHVEDECTV--VDAVNENT 479
Query: 279 DGNVEKSLENDICN 238
D ++E++ E + N
Sbjct: 480 DSSIEENDEENTEN 493
>AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein.
Length = 1280
Score = 31.1 bits (67), Expect = 0.74
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = -3
Query: 456 EENKVPESSKENESDTISIEVPVLGNQAVPEVNEEKTAENDDTGEVSCNVECVDA-ETTA 280
+E PE++ ++ ++ S E P G+Q+ VN E+ EN + E C V VDA
Sbjct: 423 QETLSPETA-DSSTNKNSDEFPDEGSQSEASVNNEEVLENVEHVEDECTV--VDAVNENT 479
Query: 279 DGNVEKSLENDICN 238
D ++E++ E + N
Sbjct: 480 DSSIEENDEENTEN 493
>Z49969-2|CAA90270.1| 564|Caenorhabditis elegans Hypothetical
protein W01C9.2 protein.
Length = 564
Score = 30.7 bits (66), Expect = 0.98
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = -3
Query: 462 PLEENKVPESSKENESDTISIEVPVLGNQAVPEVNEEKTAENDDTGEV 319
PL + P S+++ E+ S+E+ +LGN+ + +EE + EN E+
Sbjct: 156 PLSIRRNPTSTQDIEALVSSVEMMLLGNETMFFGDEEGSGENSGNDEI 203
>AF067947-7|AAK68397.2| 295|Caenorhabditis elegans Hypothetical
protein T10B5.3 protein.
Length = 295
Score = 30.7 bits (66), Expect = 0.98
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = -3
Query: 429 KENESDTISIEVP--VLGNQAVPEVNEEKTAENDDTGEVSCNVECVDAETTADGNVEKSL 256
K ++ + ++ P V N + + T +DD GE S + D E D +
Sbjct: 202 KRRTNNVVIVQQPLVVFNNDLDSDSEDFDTIGSDDDGESSEDDWWEDNELKEDEEENQDD 261
Query: 255 ENDICNDCDDAEMNIDT 205
+++ ND DD+EM+ D+
Sbjct: 262 DDEDDNDSDDSEMDADS 278
>AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical
protein F32D1.9 protein.
Length = 513
Score = 30.7 bits (66), Expect = 0.98
Identities = 21/79 (26%), Positives = 39/79 (49%)
Frame = -3
Query: 456 EENKVPESSKENESDTISIEVPVLGNQAVPEVNEEKTAENDDTGEVSCNVECVDAETTAD 277
EE+ V D I ++ V+ + VP+ +E+TAEN + E + + AE + +
Sbjct: 17 EEHAVAPVEDSENPDVIQLDDDVIPEEDVPD--DEETAENLENLENVLDDSEIIAENSGE 74
Query: 276 GNVEKSLENDICNDCDDAE 220
+ E E++ D DD++
Sbjct: 75 ADQEVEEEDNPFADDDDSD 93
>U23523-4|AAC46557.1| 83|Caenorhabditis elegans Hypothetical
protein F53A9.2 protein.
Length = 83
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = +3
Query: 225 HHHNHYKYHFRGFFQRF--RLQSFLHQHIRHYMKLHRYHH 338
HHH H+ +H F L H H H+ H +HH
Sbjct: 41 HHHGHH-HHHHSFLHELGHALTGHHHHHHGHHFGHHHHHH 79
>AF039710-10|AAB96693.2| 393|Caenorhabditis elegans Hypothetical
protein C46E10.9 protein.
Length = 393
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +3
Query: 198 LREYLYSFLHHHNHYKYHFRGFFQRFRLQSFLHQHIRHYMKLHRYHHSP 344
L+E+LY+ L +H+ F +FR + +H+ H+ + ++ +P
Sbjct: 253 LQEHLYTHLKERSHFDCPMLNCFTQFRSHLEIQRHLEHHHLVSPHNLAP 301
>AC024791-3|AAF60673.1| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.13 protein.
Length = 468
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/66 (24%), Positives = 34/66 (51%)
Frame = -3
Query: 519 LNRIIPSEKKISSLQEIFRPLEENKVPESSKENESDTISIEVPVLGNQAVPEVNEEKTAE 340
+ R+ +EK+ +E + +ENK E S ++ I + ++ EV+E+K +
Sbjct: 311 MERMAKAEKEEKEKEEKEKKEKENKENELSADSMKTAIPAKSAKAESEVAGEVDEQKKVK 370
Query: 339 NDDTGE 322
++ +GE
Sbjct: 371 DNSSGE 376
>U49830-12|AAL16311.1| 363|Caenorhabditis elegans Hypothetical
protein C33F10.13 protein.
Length = 363
Score = 29.1 bits (62), Expect = 3.0
Identities = 28/90 (31%), Positives = 40/90 (44%)
Frame = -3
Query: 651 KCRSSITLYEALEVIVRTESHRLLLVNKDDMLIGIVSLSDILVYLNRIIPSEKKISSLQE 472
K R SI L + +I+RT+ HR + + L I + L Y RI P + + L E
Sbjct: 49 KARVSIRLDSEVVIIIRTDEHRDMSIY---FLTDIFRIPGALNY-QRIGPPFQNMPGLIE 104
Query: 471 IFRPLEENKVPESSKENESDTISIEVPVLG 382
+ L + VP D S E+P LG
Sbjct: 105 LV--LSNDFVPLDQPYLPEDESSWEMPQLG 132
>Z68341-3|CAA92766.2| 269|Caenorhabditis elegans Hypothetical
protein F01G4.5 protein.
Length = 269
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 313 T*NFTGIIILRSFFFIYFWNCLVP*NWDFYRN 408
T +FT +++L F IY WN P NW++ N
Sbjct: 23 TFSFTRLLLLDVAFSIYLWNIWTP-NWEWTVN 53
>U70846-2|ABI18146.1| 647|Caenorhabditis elegans Hypothetical
protein D1073.1b protein.
Length = 647
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = -3
Query: 441 PESSKENESDTISIEVPVLGNQAVPEVNEEKTAENDDTGEVSCNVECVDAETTADGNV 268
P +S E E + + E + Q V + EK+ D+G V+ + EC + D ++
Sbjct: 589 PLNSSEIEVNDVPTENGKVNGQTVEKAEYEKSESESDSGAVTFHGECSEDPLLCDRSI 646
>U70846-1|AAB09104.4| 510|Caenorhabditis elegans Hypothetical
protein D1073.1a protein.
Length = 510
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = -3
Query: 441 PESSKENESDTISIEVPVLGNQAVPEVNEEKTAENDDTGEVSCNVECVDAETTADGNV 268
P +S E E + + E + Q V + EK+ D+G V+ + EC + D ++
Sbjct: 452 PLNSSEIEVNDVPTENGKVNGQTVEKAEYEKSESESDSGAVTFHGECSEDPLLCDRSI 509
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = -3
Query: 495 KKISSLQEIFRP-LEENKVPESSKENESDTISIEVPVLGNQAVPEVNEEKTAENDDTGEV 319
+++ Q+I LE+N+ P S ES++ + P + + ++K A+N T EV
Sbjct: 958 ERVGKEQQIIEDSLEQNRKPSSKTVKESESREAQEPRIEKDEMESEQQKKDADN-PTVEV 1016
Query: 318 SCNVECVDAETTADGNVEKSLE 253
E +E+ +++L+
Sbjct: 1017 DKESEASSSESDKSDFEDETLD 1038
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -3
Query: 444 VPESSKENESDTISIEV--PVLGNQAVPEVNEEKTAENDDTGEVSCNVECVDAETTADGN 271
VP + K+ E+ T +++V PV G + E A+ D G+ S ++E +A+ +
Sbjct: 4309 VPTTVKQGETATFNVKVKGPVKGVKWYKNGKEIPDAKTKDNGDGSYSLEIPNAQVEDAAD 4368
Query: 270 VEKSLENDICNDCDDA 223
+ + ND D D +
Sbjct: 4369 YKVVVSND-AGDADSS 4383
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -3
Query: 444 VPESSKENESDTISIEV--PVLGNQAVPEVNEEKTAENDDTGEVSCNVECVDAETTADGN 271
VP + K+ E+ T +++V PV G + E A+ D G+ S ++E +A+ +
Sbjct: 3669 VPTTVKQGETATFNVKVKGPVKGVKWYKNGKEIPDAKTKDNGDGSYSLEIPNAQVEDAAD 3728
Query: 270 VEKSLENDICNDCDDA 223
+ + ND D D +
Sbjct: 3729 YKVVVSND-AGDADSS 3743
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -3
Query: 444 VPESSKENESDTISIEV--PVLGNQAVPEVNEEKTAENDDTGEVSCNVECVDAETTADGN 271
VP + K+ E+ T +++V PV G + E A+ D G+ S ++E +A+ +
Sbjct: 4309 VPTTVKQGETATFNVKVKGPVKGVKWYKNGKEIPDAKTKDNGDGSYSLEIPNAQVEDAAD 4368
Query: 270 VEKSLENDICNDCDDA 223
+ + ND D D +
Sbjct: 4369 YKVVVSND-AGDADSS 4383
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -3
Query: 444 VPESSKENESDTISIEV--PVLGNQAVPEVNEEKTAENDDTGEVSCNVECVDAETTADGN 271
VP + K+ E+ T +++V PV G + E A+ D G+ S ++E +A+ +
Sbjct: 4309 VPTTVKQGETATFNVKVKGPVKGVKWYKNGKEIPDAKTKDNGDGSYSLEIPNAQVEDAAD 4368
Query: 270 VEKSLENDICNDCDDA 223
+ + ND D D +
Sbjct: 4369 YKVVVSND-AGDADSS 4383
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -3
Query: 444 VPESSKENESDTISIEV--PVLGNQAVPEVNEEKTAENDDTGEVSCNVECVDAETTADGN 271
VP + K+ E+ T +++V PV G + E A+ D G+ S ++E +A+ +
Sbjct: 3669 VPTTVKQGETATFNVKVKGPVKGVKWYKNGKEIPDAKTKDNGDGSYSLEIPNAQVEDAAD 3728
Query: 270 VEKSLENDICNDCDDA 223
+ + ND D D +
Sbjct: 3729 YKVVVSND-AGDADSS 3743
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -3
Query: 444 VPESSKENESDTISIEV--PVLGNQAVPEVNEEKTAENDDTGEVSCNVECVDAETTADGN 271
VP + K+ E+ T +++V PV G + E A+ D G+ S ++E +A+ +
Sbjct: 4309 VPTTVKQGETATFNVKVKGPVKGVKWYKNGKEIPDAKTKDNGDGSYSLEIPNAQVEDAAD 4368
Query: 270 VEKSLENDICNDCDDA 223
+ + ND D D +
Sbjct: 4369 YKVVVSND-AGDADSS 4383
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 28.3 bits (60), Expect = 5.2
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 17/116 (14%)
Frame = -3
Query: 576 VNKDDMLIGIVS--LSDILVYLNRI-----IPSEKKISSLQEIFRPLEENKVPESSKENE 418
+N DD LI + + + LV + R I ++I L ++ R +E+ + ES NE
Sbjct: 710 INNDDELIDNIDDIMMNALVAVKRERDDLRIQGNQQIQELHDLKRDIEKLRRSESESLNE 769
Query: 417 SDTISIEVP----------VLGNQAVPEVNEEKTAENDDTGEVSCNVECVDAETTA 280
SD E+ + + + E+N E + +ND+ V ++E ++ +TA
Sbjct: 770 SDDRVRELTRENMHTKEQVFMLQEKLRELNLELSTKNDEIDMVKASIEELNRNSTA 825
>AF098993-7|ABN43095.1| 525|Caenorhabditis elegans Hypothetical
protein T10B11.7b protein.
Length = 525
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 369 PEVNEEKTAEN-DDTGEVSCNVECVDAETTADGNVEKSLENDICNDCDDAE 220
P + T+E +D G+ E ++E+ +D E+ +END+ + DD E
Sbjct: 398 PAYTTDMTSEFLEDDGDTEFKSE--NSESDSDSEDEQKVENDVASSADDIE 446
>AF098993-6|AAC67469.2| 562|Caenorhabditis elegans Hypothetical
protein T10B11.7a protein.
Length = 562
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 369 PEVNEEKTAEN-DDTGEVSCNVECVDAETTADGNVEKSLENDICNDCDDAE 220
P + T+E +D G+ E ++E+ +D E+ +END+ + DD E
Sbjct: 435 PAYTTDMTSEFLEDDGDTEFKSE--NSESDSDSEDEQKVENDVASSADDIE 483
>Z29560-9|CAA82661.3| 148|Caenorhabditis elegans Hypothetical
protein K03H1.9 protein.
Length = 148
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +3
Query: 228 HHNHYKYHFRGFFQRFRLQSFLHQHIRHYMKLHRY-HHS 341
HH H++YH +RL H H L + HHS
Sbjct: 7 HHQHHRYHLLLLRLHYRLHRLRHPFHHHRKMLWQMTHHS 45
>U70845-2|AAB09100.1| 102|Caenorhabditis elegans Hypothetical
protein F22H10.2 protein.
Length = 102
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +3
Query: 225 HHHNHYKYHFRGFFQRF-RLQSFLHQHIRHYMKLHRYHH 338
HHH H+ +H G + H H H+ H HH
Sbjct: 57 HHHGHHHHHHHGLLHGLGHALTGGHHHHHHHGGHHFGHH 95
>AC024841-3|AAK68542.1| 185|Caenorhabditis elegans Hypothetical
protein Y59H11AM.4 protein.
Length = 185
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -3
Query: 501 SEKKISSLQEIFRPLEENKVPESSKENESDTISIE-VPVLGNQAVPEVNEEKTAENDDTG 325
++KK S+++ +P E K E+ EN+ IS E + PE+ ++K+ +D
Sbjct: 109 TQKKQKSVRKTAKPKNEEKDAEAPVENDDKKISEEGINKTDKTEEPELEKKKSELSDSKK 168
Query: 324 E 322
E
Sbjct: 169 E 169
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 522 YLNRIIPSEKKISSLQEIFRPLEENKVPES 433
++ + IP+ K I+ E FRP+ EN P S
Sbjct: 631 HIRKPIPTSKSIAEPVEHFRPIIENVTPAS 660
>U23523-5|AAC46556.1| 77|Caenorhabditis elegans Hypothetical
protein F53A9.1 protein.
Length = 77
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +3
Query: 225 HHHNHYKYHFRGFFQRFRLQSFLHQHIRHYMKLHRYHH 338
HHH H+ +H GF H H H+ H HH
Sbjct: 42 HHHGHH-HHHHGFLHELGHAMTGHHH--HHHGHHHGHH 76
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 522 YLNRIIPSEKKISSLQEIFRPLEENKVPES 433
++ + IP+ K I+ E FRP+ EN P S
Sbjct: 631 HIRKPIPTSKSIAEPVEHFRPIIENVTPAS 660
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,010,719
Number of Sequences: 27780
Number of extensions: 262603
Number of successful extensions: 987
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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