Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc13k09
         (744 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding pr...    27   0.61 
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    23   10.0 
DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormo...    23   10.0 
AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled ...    23   10.0 
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   10.0 

>AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding
           protein AgamOBP14 protein.
          Length = 188

 Score = 27.1 bits (57), Expect = 0.61
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 83  CPQGNCCVRCLPCGSSEFCSRT 18
           CP+  C VRCL    + +C  T
Sbjct: 81  CPETQCFVRCLSANLNLYCDET 102


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +2

Query: 173 LDNNVTSDIVLNAFET*SNHIP-FSF*KKNFNMQDTESIPI-NYVLQIIISLIV 328
           LDN++ +++V       SNHI   S    N  +Q  E++ + N+ +++   L V
Sbjct: 530 LDNSLPNELVFRVVSVSSNHITGESVATNNILLQPYEAVVLANHAIRLAQQLYV 583


>DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormone
           receptor protein.
          Length = 354

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 121 SYFRCVGVGFTSNVMVCSR*QRYF 192
           ++FR  G+  +S +++C    RYF
Sbjct: 125 AFFRTFGLYLSSFILICISVDRYF 148


>AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 354

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 121 SYFRCVGVGFTSNVMVCSR*QRYF 192
           ++FR  G+  +S +++C    RYF
Sbjct: 125 AFFRTFGLYLSSFILICISVDRYF 148


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 394 RIYFVNNYLNYLGLRYGMGMLANYWYCRFITRCTRL 501
           R+ F++N  +Y+ LRY       Y   + I RC  +
Sbjct: 381 RVEFIDNSPDYMQLRYTTDCAGLYREPQPINRCDNI 416


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,410
Number of Sequences: 2352
Number of extensions: 13939
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)