Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc13k08
         (494 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       24   2.5  
AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.        24   2.5  
AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.        24   2.5  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   3.3  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     22   10.0 

>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 275 LKMTSLEPNRFRLRPSDRFC 334
           + +TSL    F LRPS+R C
Sbjct: 1   MSVTSLVDGEFLLRPSNRAC 20


>AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 339 RPQKRSLGRSLKRLGSNDVIFSSDYVPNS 253
           + Q +   R LK+LGSN + F+ +  PN+
Sbjct: 95  KEQTKLQERLLKKLGSNAIPFTFNISPNA 123


>AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 339 RPQKRSLGRSLKRLGSNDVIFSSDYVPNS 253
           + Q +   R LK+LGSN + F+ +  PN+
Sbjct: 95  KEQTKLQERLLKKLGSNAIPFTFNISPNA 123


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -3

Query: 453 LANRMADIAQDVIAKPSNPQ 394
           L NR+ DI+++  A PS+P+
Sbjct: 408 LYNRLRDISEETSALPSHPR 427


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -2

Query: 235 SKGSHTAQQVQSQAQPHHV 179
           +  SH+  Q Q    PHH+
Sbjct: 343 NSSSHSHSQAQPHHNPHHI 361


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,200
Number of Sequences: 2352
Number of extensions: 7628
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43977336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)