Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc13j01
         (394 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY226549-1|AAO47375.1|  306|Drosophila melanogaster pickpocket 2...    33   0.18 
AE014297-4404|AAF56909.3|  550|Drosophila melanogaster CG12048-P...    33   0.18 
BT001591-1|AAN71346.1|  760|Drosophila melanogaster RE27138p pro...    29   2.9  
AY071846-1|AAL60055.1|  760|Drosophila melanogaster hepatocyte g...    29   2.9  
AY051789-1|AAK93213.1|  760|Drosophila melanogaster LD30575p pro...    29   2.9  
AE014134-454|AAF51222.1|  647|Drosophila melanogaster CG2903-PA,...    29   2.9  
AE014134-453|AAN10412.2|  760|Drosophila melanogaster CG2903-PC,...    29   2.9  
AE014134-452|AAF51221.2|  760|Drosophila melanogaster CG2903-PB,...    29   2.9  
AE014297-2569|AAX52965.1|   94|Drosophila melanogaster CG14300-P...    28   5.1  

>AY226549-1|AAO47375.1|  306|Drosophila melanogaster pickpocket 21
           protein.
          Length = 306

 Score = 32.7 bits (71), Expect = 0.18
 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = +1

Query: 202 SNINTNKALTDFLRPLCETDQTRKTYAVPWNCNNIFH-CNYYNVPLFVVNCPENTAYSYV 378
           SN   NK LTD L  L   D       + + C ++FH C +   P   VNC E   Y + 
Sbjct: 134 SNFFGNKTLTDELHMLDHLDLREVYKFIQFRCQDLFHTCRWRGNP---VNCCEVIEYQFT 190

Query: 379 SDG 387
             G
Sbjct: 191 EAG 193


>AE014297-4404|AAF56909.3|  550|Drosophila melanogaster CG12048-PA
           protein.
          Length = 550

 Score = 32.7 bits (71), Expect = 0.18
 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = +1

Query: 202 SNINTNKALTDFLRPLCETDQTRKTYAVPWNCNNIFH-CNYYNVPLFVVNCPENTAYSYV 378
           SN   NK LTD L  L   D       + + C ++FH C +   P   VNC E   Y + 
Sbjct: 177 SNFFGNKTLTDELHMLDHLDLREVYKFIQFRCQDLFHTCRWRGNP---VNCCEVIEYQFT 233

Query: 379 SDG 387
             G
Sbjct: 234 EAG 236


>BT001591-1|AAN71346.1|  760|Drosophila melanogaster RE27138p
           protein.
          Length = 760

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 334 KEHCNNCNEIYCYNSTAQR 278
           K HC NC +++C   TA++
Sbjct: 177 KHHCRNCGQVFCGQCTAKQ 195


>AY071846-1|AAL60055.1|  760|Drosophila melanogaster hepatocyte
           growth factor-regulatedtyrosine kinase substrate
           protein.
          Length = 760

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 334 KEHCNNCNEIYCYNSTAQR 278
           K HC NC +++C   TA++
Sbjct: 177 KHHCRNCGQVFCGQCTAKQ 195


>AY051789-1|AAK93213.1|  760|Drosophila melanogaster LD30575p
           protein.
          Length = 760

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 334 KEHCNNCNEIYCYNSTAQR 278
           K HC NC +++C   TA++
Sbjct: 177 KHHCRNCGQVFCGQCTAKQ 195


>AE014134-454|AAF51222.1|  647|Drosophila melanogaster CG2903-PA,
           isoform A protein.
          Length = 647

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 334 KEHCNNCNEIYCYNSTAQR 278
           K HC NC +++C   TA++
Sbjct: 64  KHHCRNCGQVFCGQCTAKQ 82


>AE014134-453|AAN10412.2|  760|Drosophila melanogaster CG2903-PC,
           isoform C protein.
          Length = 760

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 334 KEHCNNCNEIYCYNSTAQR 278
           K HC NC +++C   TA++
Sbjct: 177 KHHCRNCGQVFCGQCTAKQ 195


>AE014134-452|AAF51221.2|  760|Drosophila melanogaster CG2903-PB,
           isoform B protein.
          Length = 760

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 334 KEHCNNCNEIYCYNSTAQR 278
           K HC NC +++C   TA++
Sbjct: 177 KHHCRNCGQVFCGQCTAKQ 195


>AE014297-2569|AAX52965.1|   94|Drosophila melanogaster CG14300-PA
           protein.
          Length = 94

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +1

Query: 241 RPLCETD-QTRKTYAVPWNCNNIFHCNYYNVPLFVVNCPENTAYSYVSDGCI 393
           R  C+ + +  +TY   ++    + C    VP   V+CP   AY ++   CI
Sbjct: 26  RSACKDESEIGQTYTHHFDAAKYWLCETLGVPATEVDCPAGLAYMHLLKECI 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,731,313
Number of Sequences: 53049
Number of extensions: 191207
Number of successful extensions: 504
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1107890535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)