Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13i21
(320 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ996537-1|ABJ91576.1| 991|Homo sapiens sodium bicarbonate cotr... 30 1.3
DQ996398-1|ABJ91577.1| 991|Homo sapiens sodium bicarbonate cotr... 30 1.3
DQ975204-1|ABJ09587.1| 1040|Homo sapiens sodium-driven chloride ... 30 1.3
DQ063579-1|AAY79176.1| 1093|Homo sapiens Na+-driven Cl-HCO3 exch... 30 1.3
BC025994-1|AAH25994.1| 691|Homo sapiens SLC4A8 protein protein. 30 1.3
AF107099-1|AAD52981.1| 670|Homo sapiens sodium bicarbonate cotr... 30 1.3
AF069512-1|AAC82380.1| 1044|Homo sapiens sodium bicarbonate cotr... 30 1.3
AB018282-1|BAA34459.1| 1130|Homo sapiens KIAA0739 protein protein. 30 1.3
AK128321-1|BAC87383.1| 329|Homo sapiens ember 8 (SLC4A8). prot... 30 1.8
>DQ996537-1|ABJ91576.1| 991|Homo sapiens sodium bicarbonate
cotransporter protein.
Length = 991
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 320 NRI*RASKVFAGQIEQSSDYC*TITARKRKRLLKKGHF-NKNKKNSYVP 177
N I S + Q E SSD ++ + R+ LLKK H N+ K+N+ +P
Sbjct: 132 NSIEEISDLILDQQELSSDLNDSMRVKVREALLKKHHHQNEKKRNNLIP 180
>DQ996398-1|ABJ91577.1| 991|Homo sapiens sodium bicarbonate
cotransporter protein.
Length = 991
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 320 NRI*RASKVFAGQIEQSSDYC*TITARKRKRLLKKGHF-NKNKKNSYVP 177
N I S + Q E SSD ++ + R+ LLKK H N+ K+N+ +P
Sbjct: 132 NSIEEISDLILDQQELSSDLNDSMRVKVREALLKKHHHQNEKKRNNLIP 180
>DQ975204-1|ABJ09587.1| 1040|Homo sapiens sodium-driven chloride
bicarbonate exchanger protein.
Length = 1040
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 320 NRI*RASKVFAGQIEQSSDYC*TITARKRKRLLKKGHF-NKNKKNSYVP 177
N I S + Q E SSD ++ + R+ LLKK H N+ K+N+ +P
Sbjct: 132 NSIEEISDLILDQQELSSDLNDSMRVKVREALLKKHHHQNEKKRNNLIP 180
>DQ063579-1|AAY79176.1| 1093|Homo sapiens Na+-driven Cl-HCO3
exchanger protein.
Length = 1093
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 320 NRI*RASKVFAGQIEQSSDYC*TITARKRKRLLKKGHF-NKNKKNSYVP 177
N I S + Q E SSD ++ + R+ LLKK H N+ K+N+ +P
Sbjct: 185 NSIEEISDLILDQQELSSDLNDSMRVKVREALLKKHHHQNEKKRNNLIP 233
>BC025994-1|AAH25994.1| 691|Homo sapiens SLC4A8 protein protein.
Length = 691
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 320 NRI*RASKVFAGQIEQSSDYC*TITARKRKRLLKKGHF-NKNKKNSYVP 177
N I S + Q E SSD ++ + R+ LLKK H N+ K+N+ +P
Sbjct: 185 NSIEEISDLILDQQELSSDLNDSMRVKVREALLKKHHHQNEKKRNNLIP 233
>AF107099-1|AAD52981.1| 670|Homo sapiens sodium bicarbonate
cotransporter isoform 3 protein.
Length = 670
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 320 NRI*RASKVFAGQIEQSSDYC*TITARKRKRLLKKGHF-NKNKKNSYVP 177
N I S + Q E SSD ++ + R+ LLKK H N+ K+N+ +P
Sbjct: 185 NSIEEISDLILDQQELSSDLNDSMRVKVREALLKKHHHQNEKKRNNLIP 233
>AF069512-1|AAC82380.1| 1044|Homo sapiens sodium bicarbonate
cotransporter protein.
Length = 1044
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 320 NRI*RASKVFAGQIEQSSDYC*TITARKRKRLLKKGHF-NKNKKNSYVP 177
N I S + Q E SSD ++ + R+ LLKK H N+ K+N+ +P
Sbjct: 185 NSIEEISDLILDQQELSSDLNDSMRVKVREALLKKHHHQNEKKRNNLIP 233
>AB018282-1|BAA34459.1| 1130|Homo sapiens KIAA0739 protein protein.
Length = 1130
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 320 NRI*RASKVFAGQIEQSSDYC*TITARKRKRLLKKGHF-NKNKKNSYVP 177
N I S + Q E SSD ++ + R+ LLKK H N+ K+N+ +P
Sbjct: 271 NSIEEISDLILDQQELSSDLNDSMRVKVREALLKKHHHQNEKKRNNLIP 319
>AK128321-1|BAC87383.1| 329|Homo sapiens ember 8 (SLC4A8).
protein.
Length = 329
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 320 NRI*RASKVFAGQIEQSSDYC*TITARKRKRLLKKGHF-NKNKKNSYVP 177
N I S + Q E SSD ++ + R+ LLKK H N+ K+N+ +P
Sbjct: 132 NSIEEISDLILDQQELSSDLNDSMGVKVREALLKKHHHQNEKKRNNLIP 180
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,297,793
Number of Sequences: 237096
Number of extensions: 283090
Number of successful extensions: 350
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 350
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1569468906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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