Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13i03
(730 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 370 e-105
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 370 e-105
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 2.2
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 2.2
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 23 3.9
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 6.8
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 370 bits (911), Expect = e-105
Identities = 172/211 (81%), Positives = 187/211 (88%)
Frame = -2
Query: 729 NFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXATSLCFVYPLDFARTRLAADVGK 550
NFAFKDKYKQVFLGGVDK TQF RYF ATSLCFVYPLDFARTRLAADVGK
Sbjct: 90 NFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGK 149
Query: 549 GDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKN 370
G+REF+GLGNC++KIFK+DG+ GLYRGFGVSVQGIIIYRA+YFGFYDTARGMLPDPK
Sbjct: 150 AGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKK 209
Query: 369 TPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGT 190
TP +ISW IAQ VTTVAGI+SYPFDTVRRRMMMQSGRAKS+ILYK+T+HCWATI KTEG
Sbjct: 210 TPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGG 269
Query: 189 SAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 97
+AFFKGAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 270 NAFFKGAFSNILRGTGGALVLVLYDEIKNLL 300
Score = 37.5 bits (83), Expect = 1e-04
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 6/129 (4%)
Frame = -2
Query: 540 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD--PKNT 367
++ + G+ +C +I K G + +RG +V +A F F D + + KNT
Sbjct: 50 EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNT 109
Query: 366 PIVISWAIAQTVTTVAGIIS----YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKT 199
+ + AG S YP D R R+ G+A + + +C I K
Sbjct: 110 QFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKA 169
Query: 198 EGTSAFFKG 172
+G + ++G
Sbjct: 170 DGITGLYRG 178
Score = 31.9 bits (69), Expect = 0.006
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -2
Query: 348 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFFK 175
A A + TTVA P + V+ + +Q S + + YK I C+ I K +G ++++
Sbjct: 20 AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74
Query: 174 GAFSNVLR 151
G +NV+R
Sbjct: 75 GNLANVIR 82
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 370 bits (911), Expect = e-105
Identities = 172/211 (81%), Positives = 187/211 (88%)
Frame = -2
Query: 729 NFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXATSLCFVYPLDFARTRLAADVGK 550
NFAFKDKYKQVFLGGVDK TQF RYF ATSLCFVYPLDFARTRLAADVGK
Sbjct: 90 NFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGK 149
Query: 549 GDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKN 370
G+REF+GLGNC++KIFK+DG+ GLYRGFGVSVQGIIIYRA+YFGFYDTARGMLPDPK
Sbjct: 150 AGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKK 209
Query: 369 TPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGT 190
TP +ISW IAQ VTTVAGI+SYPFDTVRRRMMMQSGRAKS+ILYK+T+HCWATI KTEG
Sbjct: 210 TPFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGG 269
Query: 189 SAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 97
+AFFKGAFSN+LRGTGGA VLVLYDEIK +L
Sbjct: 270 NAFFKGAFSNILRGTGGALVLVLYDEIKNLL 300
Score = 37.5 bits (83), Expect = 1e-04
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 6/129 (4%)
Frame = -2
Query: 540 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD--PKNT 367
++ + G+ +C +I K G + +RG +V +A F F D + + KNT
Sbjct: 50 EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNT 109
Query: 366 PIVISWAIAQTVTTVAGIIS----YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKT 199
+ + AG S YP D R R+ G+A + + +C I K
Sbjct: 110 QFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKA 169
Query: 198 EGTSAFFKG 172
+G + ++G
Sbjct: 170 DGITGLYRG 178
Score = 31.9 bits (69), Expect = 0.006
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -2
Query: 348 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFFK 175
A A + TTVA P + V+ + +Q S + + YK I C+ I K +G ++++
Sbjct: 20 AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74
Query: 174 GAFSNVLR 151
G +NV+R
Sbjct: 75 GNLANVIR 82
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.4 bits (48), Expect = 2.2
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +1
Query: 526 GEFTLAISLTDIGGKTGTCEVKGV 597
G++ + + GGK G C +K V
Sbjct: 603 GQYGIVFACDGWGGKAGPCAIKSV 626
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.4 bits (48), Expect = 2.2
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +1
Query: 526 GEFTLAISLTDIGGKTGTCEVKGV 597
G++ + + GGK G C +K V
Sbjct: 641 GQYGIVFACDGWGGKAGPCAIKSV 664
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 107 LISSYKTSTKAPPVPLRTLEKAPL 178
L++++KT T+ P + LEK P+
Sbjct: 134 LVNAFKTLTQEPKNTNKFLEKGPV 157
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 6.8
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -1
Query: 571 SCRRCR*GRWPA*ILRSRKLHQQDLQVRRSDRSVQRFRCVRAR 443
SC R R + R KLH + ++ S +R+ C R R
Sbjct: 236 SCSRDRNREYKEKDRRYEKLHNEKEKLLEERTSRKRYSCSRER 278
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.314 0.133 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,125
Number of Sequences: 438
Number of extensions: 3766
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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