Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13i02
(709 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific do... 25 2.3
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 25 2.3
AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific do... 25 2.3
AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific doub... 25 2.3
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 25 3.1
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 25 3.1
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 25 3.1
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 25 3.1
AY028784-1|AAK32958.2| 499|Anopheles gambiae cytochrome P450 pr... 23 7.1
DQ396551-1|ABD60146.1| 354|Anopheles gambiae adipokinetic hormo... 23 9.4
AY500851-1|AAS77205.1| 605|Anopheles gambiae G-protein coupled ... 23 9.4
AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 23 9.4
AY298745-1|AAQ63187.1| 354|Anopheles gambiae G-protein coupled ... 23 9.4
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 23 9.4
AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein... 23 9.4
>DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific
doublesex protein protein.
Length = 265
Score = 25.0 bits (52), Expect = 2.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 343 TEGEGARRPCSSALAPRASP 402
T+G GA C+++L PR P
Sbjct: 20 TDGNGASSSCNNSLNPRTPP 39
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 25.0 bits (52), Expect = 2.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 343 TEGEGARRPCSSALAPRASP 402
T+G GA C+++L PR P
Sbjct: 20 TDGNGASSSCNNSLNPRTPP 39
>AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific
doublesex protein protein.
Length = 241
Score = 25.0 bits (52), Expect = 2.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 343 TEGEGARRPCSSALAPRASP 402
T+G GA C+++L PR P
Sbjct: 20 TDGNGAASSCNNSLNPRTPP 39
>AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific
doublesex protein protein.
Length = 283
Score = 25.0 bits (52), Expect = 2.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 343 TEGEGARRPCSSALAPRASP 402
T+G GA C+++L PR P
Sbjct: 20 TDGNGAASSCNNSLNPRTPP 39
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 24.6 bits (51), Expect = 3.1
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 530 PGTPGTASG*AESSRSHSGRRTSVSRNHKPISLFERSSPGAPH--RSHLVSGI 682
P TP + S + +S ++ KP F+ SSP H H +SGI
Sbjct: 365 PSTPSLMNERQGGYESQASSHSSFKQSPKPEDEFKVSSPAPVHPLAGHPLSGI 417
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 24.6 bits (51), Expect = 3.1
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 530 PGTPGTASG*AESSRSHSGRRTSVSRNHKPISLFERSSPGAPH--RSHLVSGI 682
P TP + S + +S ++ KP F+ SSP H H +SGI
Sbjct: 365 PSTPSLMNERQGGYESQASSHSSFKQSPKPEDEFKVSSPAPVHPLAGHPLSGI 417
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 24.6 bits (51), Expect = 3.1
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 530 PGTPGTASG*AESSRSHSGRRTSVSRNHKPISLFERSSPGAPH--RSHLVSGI 682
P TP + S + +S ++ KP F+ SSP H H +SGI
Sbjct: 317 PSTPSLMNERQGGYESQASSHSSFKQSPKPEDEFKVSSPAPVHPLAGHPLSGI 369
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 24.6 bits (51), Expect = 3.1
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 530 PGTPGTASG*AESSRSHSGRRTSVSRNHKPISLFERSSPGAPH--RSHLVSGI 682
P TP + S + +S ++ KP F+ SSP H H +SGI
Sbjct: 325 PSTPSLMNERQGGYESQASSHSSFKQSPKPEDEFKVSSPAPVHPLAGHPLSGI 377
>AY028784-1|AAK32958.2| 499|Anopheles gambiae cytochrome P450
protein.
Length = 499
Score = 23.4 bits (48), Expect = 7.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 347 RVRAPGDRAAALWLRGPVLLVL 412
R+++ GD + R PVLLVL
Sbjct: 64 RLKSKGDYVGIYFFRDPVLLVL 85
>DQ396551-1|ABD60146.1| 354|Anopheles gambiae adipokinetic hormone
receptor protein.
Length = 354
Score = 23.0 bits (47), Expect = 9.4
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 278 ISIMCSTLFSLCWAPY 325
++IM +F +CW PY
Sbjct: 269 MTIMIVIVFVVCWTPY 284
>AY500851-1|AAS77205.1| 605|Anopheles gambiae G-protein coupled
receptor 3 protein.
Length = 605
Score = 23.0 bits (47), Expect = 9.4
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +2
Query: 278 ISIMCSTLFSLCWAPY 325
++I+ +F LCW+PY
Sbjct: 455 MTIVIVIVFVLCWSPY 470
>AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled
receptor protein.
Length = 611
Score = 23.0 bits (47), Expect = 9.4
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 278 ISIMCSTLFSLCWAPY 325
IS++ F +CW PY
Sbjct: 417 ISVVIVVAFVVCWTPY 432
>AY298745-1|AAQ63187.1| 354|Anopheles gambiae G-protein coupled
receptor protein.
Length = 354
Score = 23.0 bits (47), Expect = 9.4
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 278 ISIMCSTLFSLCWAPY 325
++IM +F +CW PY
Sbjct: 269 MTIMIVIVFVVCWTPY 284
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 23.0 bits (47), Expect = 9.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 530 ATARDSGTDSDDSAGRLSPADEA 462
AT S +DSDDS +++ DE+
Sbjct: 1014 ATVSTSESDSDDSRLKIASGDES 1036
>AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 612
Score = 23.0 bits (47), Expect = 9.4
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 278 ISIMCSTLFSLCWAPY 325
IS++ F +CW PY
Sbjct: 418 ISVVIVVAFVVCWTPY 433
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,259
Number of Sequences: 2352
Number of extensions: 15838
Number of successful extensions: 45
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -