Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13h12
(297 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016448-1|AAB65956.2| 477|Caenorhabditis elegans Temporarily a... 106 2e-24
Z92812-8|CAB07275.1| 337|Caenorhabditis elegans Hypothetical pr... 96 5e-21
U64859-10|AAC69091.2| 383|Caenorhabditis elegans Hypothetical p... 95 1e-20
Z49207-6|CAJ58500.1| 348|Caenorhabditis elegans Hypothetical pr... 84 2e-17
Z49207-5|CAA89070.1| 402|Caenorhabditis elegans Hypothetical pr... 84 2e-17
AC024859-23|ABD63209.1| 299|Caenorhabditis elegans Hypothetical... 69 5e-13
AF025465-6|AAB71030.1| 299|Caenorhabditis elegans Hypothetical ... 67 2e-12
AL033510-6|CAA22062.1| 343|Caenorhabditis elegans Hypothetical ... 65 1e-11
AC024860-3|AAK29985.1| 345|Caenorhabditis elegans Hypothetical ... 64 2e-11
U80843-8|AAB37963.1| 250|Caenorhabditis elegans Hypothetical pr... 61 1e-10
AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical ... 60 4e-10
AL110477-10|CAB54334.1| 328|Caenorhabditis elegans Hypothetical... 56 6e-09
AL021497-1|CAA16404.1| 382|Caenorhabditis elegans Hypothetical ... 39 1e-08
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 52 1e-07
Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical pr... 50 3e-07
Z81103-3|CAB03209.1| 467|Caenorhabditis elegans Hypothetical pr... 47 2e-06
U50313-3|AAA92327.1| 335|Caenorhabditis elegans Cysteine protea... 47 3e-06
L39926-1|AAA98783.1| 335|Caenorhabditis elegans cathepsin B-lik... 47 3e-06
L39895-1|AAA98785.1| 335|Caenorhabditis elegans cathepsin B-lik... 47 3e-06
U41556-3|AAM51519.1| 378|Caenorhabditis elegans Cysteine protea... 46 5e-06
U41556-2|ABS19475.1| 369|Caenorhabditis elegans Cysteine protea... 46 5e-06
U41556-1|AAK39189.1| 379|Caenorhabditis elegans Cysteine protea... 46 5e-06
L39939-1|AAA98789.1| 379|Caenorhabditis elegans cathepsin B-lik... 46 5e-06
L39894-1|AAA98787.1| 379|Caenorhabditis elegans cathepsin B-lik... 46 5e-06
Z81070-2|CAB03007.1| 491|Caenorhabditis elegans Hypothetical pr... 45 9e-06
U80843-7|AAB37968.1| 150|Caenorhabditis elegans Hypothetical pr... 45 1e-05
L39927-1|AAA98784.1| 344|Caenorhabditis elegans cathepsin B-lik... 39 6e-04
L39896-1|AAA98786.1| 344|Caenorhabditis elegans cathepsin B-lik... 39 6e-04
AF016426-3|AAB65346.1| 344|Caenorhabditis elegans Cysteine prot... 39 6e-04
AC024844-4|AAK29958.1| 421|Caenorhabditis elegans Hypothetical ... 39 6e-04
Z81531-8|CAB04322.2| 344|Caenorhabditis elegans Hypothetical pr... 37 0.002
Z75953-1|CAB00098.1| 400|Caenorhabditis elegans Hypothetical pr... 36 0.004
AF016426-2|AAB65345.1| 335|Caenorhabditis elegans Hypothetical ... 36 0.004
Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical pr... 34 0.021
Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical p... 34 0.021
L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-lik... 34 0.021
L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-lik... 34 0.021
AF003148-6|AAB54210.2| 306|Caenorhabditis elegans Cathepsin z p... 34 0.021
Z78012-1|CAB01410.2| 329|Caenorhabditis elegans Hypothetical pr... 30 0.26
M74797-1|AAB88058.1| 329|Caenorhabditis elegans gut-specific cy... 30 0.26
AL023828-22|CAA19467.2| 272|Caenorhabditis elegans Hypothetical... 27 2.4
Z68003-2|CAA91976.2| 560|Caenorhabditis elegans Hypothetical pr... 26 4.2
U11245-1|AAA96833.1| 198|Caenorhabditis elegans cysteine protea... 26 4.2
L22447-1|AAB00354.1| 133|Caenorhabditis elegans cysteine protea... 26 4.2
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 26 5.6
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 26 5.6
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 25 7.4
AC024857-3|AAK31568.6| 611|Caenorhabditis elegans Hypothetical ... 25 7.4
Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical pr... 25 9.7
U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein. 25 9.7
AL161712-21|CAC70129.2| 729|Caenorhabditis elegans Hypothetical... 25 9.7
AL132877-7|CAC70108.1| 686|Caenorhabditis elegans Hypothetical ... 25 9.7
>AF016448-1|AAB65956.2| 477|Caenorhabditis elegans Temporarily
assigned gene nameprotein 196 protein.
Length = 477
Score = 106 bits (255), Expect = 2e-24
Identities = 42/83 (50%), Positives = 61/83 (73%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDAGCNGGLLHTAFEAI 115
VKNQG CG+CWAF+T G++E + I N+L++LSEQ+++DCD +D GCNGGL A++ I
Sbjct: 279 VKNQGNCGSCWAFSTTGNVEGAWFIAKNKLVSLSEQELVDCDSMDQGCNGGLPSNAYKEI 338
Query: 114 IKMGGVQLESDYPYEADNNNCRM 46
I+MGG++ E YPY+ C +
Sbjct: 339 IRMGGLEPEDAYPYDGRGETCHL 361
>Z92812-8|CAB07275.1| 337|Caenorhabditis elegans Hypothetical
protein T03E6.7 protein.
Length = 337
Score = 95.9 bits (228), Expect = 5e-21
Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCD--FVDAGCNGGLLHTAFE 121
VKNQGMCG+CWAF+ G+LE Q A K +L++LSEQ ++DC + + GCNGGL+ AFE
Sbjct: 135 VKNQGMCGSCWAFSATGALEGQHARKLGQLVSLSEQNLVDCSTKYGNHGCNGGLMDQAFE 194
Query: 120 AIIKMGGVQLESDYPYEADNNNCRMN 43
I GV E YPY+ + C N
Sbjct: 195 YIRDNHGVDTEESYPYKGRDMKCHFN 220
>U64859-10|AAC69091.2| 383|Caenorhabditis elegans Hypothetical
protein R09F10.1 protein.
Length = 383
Score = 94.7 bits (225), Expect = 1e-20
Identities = 43/95 (45%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDAGCNGGLLHTAFEAI 115
+KNQG CG+CWAFAT+ S+E+Q AIK +L++LSEQ+M+DCD + GC+GG A +
Sbjct: 183 IKNQGQCGSCWAFATVASVEAQNAIKKGKLVSLSEQEMVDCDGRNNGCSGGYRPYAMK-F 241
Query: 114 IKMGGVQLESDYPYEA-DNNNCRMNSNKFLVQVKD 13
+K G++ E +YPY A ++ C + N V + D
Sbjct: 242 VKENGLESEKEYPYSALKHDQCFLKENDTRVFIDD 276
>Z49207-6|CAJ58500.1| 348|Caenorhabditis elegans Hypothetical
protein R07E3.1b protein.
Length = 348
Score = 83.8 bits (198), Expect = 2e-17
Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDAGCNGGLLHTAFEAI 115
VK QG CG+CWAFA+ ++E+ +AI H E NLSEQ ++DCD VD C+GG AF
Sbjct: 147 VKAQGQCGSCWAFASTATVEAAWAIAHGEKRNLSEQTLLDCDLVDNACDGGDEDKAFR-Y 205
Query: 114 IKMGGVQLESDYPYEAD-NNNCRMNSNKFLVQVKDCY 7
I G+ D PY A N C +N + ++K Y
Sbjct: 206 IHRNGLANAVDLPYVAHRQNGCAVNDHWNTTRIKAAY 242
>Z49207-5|CAA89070.1| 402|Caenorhabditis elegans Hypothetical
protein R07E3.1a protein.
Length = 402
Score = 83.8 bits (198), Expect = 2e-17
Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDAGCNGGLLHTAFEAI 115
VK QG CG+CWAFA+ ++E+ +AI H E NLSEQ ++DCD VD C+GG AF
Sbjct: 201 VKAQGQCGSCWAFASTATVEAAWAIAHGEKRNLSEQTLLDCDLVDNACDGGDEDKAFR-Y 259
Query: 114 IKMGGVQLESDYPYEAD-NNNCRMNSNKFLVQVKDCY 7
I G+ D PY A N C +N + ++K Y
Sbjct: 260 IHRNGLANAVDLPYVAHRQNGCAVNDHWNTTRIKAAY 296
>AC024859-23|ABD63209.1| 299|Caenorhabditis elegans Hypothetical
protein Y71H2AM.25 protein.
Length = 299
Score = 69.3 bits (162), Expect = 5e-13
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAIKHN-ELINLSEQQMIDCDFVDAGCNGGLLHTAFEA 118
VK+QG C A AFA S+ES +A N L++ SEQQ+IDCD D G G A A
Sbjct: 97 VKDQGKCNASHAFAISSSIESMYAKATNGSLLSFSEQQLIDCD--DHGFKGCEEQPAINA 154
Query: 117 I--IKMGGVQLESDYPYEA-DNNNCRMNSNKFLVQVKD 13
+ G++ E+DYPY +N C +S K +Q+KD
Sbjct: 155 VSYFIFHGIETEADYPYAGKENGKCTFDSTKSKIQLKD 192
>AF025465-6|AAB71030.1| 299|Caenorhabditis elegans Hypothetical
protein K02E7.10 protein.
Length = 299
Score = 66.9 bits (156), Expect = 2e-12
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAIKHN-ELINLSEQQMIDCDFVDAGCNGGLLHTAFEA 118
VK+QG C A +AFA + ++ES +A +N +L++ SEQQ+IDC C L +
Sbjct: 95 VKDQGKCNASYAFAAIAAIESMYAKANNGKLLSFSEQQIIDCANFTNPCQENLENVLSNR 154
Query: 117 IIKMGGVQLESDYPYEADNN--NCRMNSNK 34
+K GV E+DYPY N C +S+K
Sbjct: 155 FLKENGVGTEADYPYVGKENVGKCEYDSSK 184
>AL033510-6|CAA22062.1| 343|Caenorhabditis elegans Hypothetical
protein Y40H7A.10 protein.
Length = 343
Score = 64.9 bits (151), Expect = 1e-11
Identities = 32/82 (39%), Positives = 44/82 (53%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDAGCNGGLLHTAFEAI 115
+K QG CG+CWAFAT ++ES +I L +LS QQ++DC V C GG A +
Sbjct: 153 IKYQGPCGSCWAFATAAAIESAVSISGGGLQSLSSQQLLDCTVVSDKCGGGEPVEALK-Y 211
Query: 114 IKMGGVQLESDYPYEADNNNCR 49
+ G+ +YPY CR
Sbjct: 212 AQSHGITTAHNYPYYFWTTKCR 233
>AC024860-3|AAK29985.1| 345|Caenorhabditis elegans Hypothetical
protein Y71H2AR.2 protein.
Length = 345
Score = 64.1 bits (149), Expect = 2e-11
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAIKHN-ELINLSEQQMIDCDFVDAGCNGGLLHTAFEA 118
VK+QG C A AFA S+ES +A N L++ SEQQ+IDC+ D G G A A
Sbjct: 97 VKDQGKCNASHAFAITSSIESMYAKATNGTLLSFSEQQLIDCN--DQGYKGCEEQFAMNA 154
Query: 117 I--IKMGGVQLESDYPY-EADNNNCRMNSNKFLVQVK 16
I + G++ E+DYPY + N C +S K + +K
Sbjct: 155 IGYLATHGIETEADYPYVDKTNEKCTFDSTKSKIHLK 191
>U80843-8|AAB37963.1| 250|Caenorhabditis elegans Hypothetical
protein C32B5.7 protein.
Length = 250
Score = 61.3 bits (142), Expect = 1e-10
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDAGCNGGLLHTAFEAI 115
VK+QG C A +AFA + ++ES +AI + +L++ SEQQ+IDC GC
Sbjct: 83 VKDQGNCNASYAFAAISAIESMYAIANGQLLSFSEQQIIDC---LGGCAIESDPMMAMTY 139
Query: 114 IKMGGVQLESDYPYEA-DNNNCRMNSNKFLVQVKDCY 7
++ G++ +DYP+ N C +S K + + D Y
Sbjct: 140 LERKGIETYTDYPFVGKKNEKCEYDSKKAYLILDDTY 176
>AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical
protein Y51A2D.8 protein.
Length = 386
Score = 59.7 bits (138), Expect = 4e-10
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDFVDA-GCNGGLLHTAFEA 118
+K+QG C CW FA +E+ +A + +LS+Q++ DC GC GG L T
Sbjct: 167 IKDQGQCACCWGFAVTALVETVYAAHSGKFKSLSDQEVCDCGTEGTPGCKGGSL-TLGVQ 225
Query: 117 IIKMGGVQLESDYPYEADNNN----CRMNSNKFLVQVK 16
+K G+ + DYPY+ + N CR+ +V +
Sbjct: 226 YVKKYGLSGDEDYPYDQNRANQGRRCRLRETDRIVPAR 263
>AL110477-10|CAB54334.1| 328|Caenorhabditis elegans Hypothetical
protein Y113G7B.15 protein.
Length = 328
Score = 55.6 bits (128), Expect = 6e-09
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDC-DFVDA-GCNGGLLHTAFE 121
VK+Q CG CWAFAT E+ + +LS+Q++ DC D D GC GG +
Sbjct: 117 VKDQEQCGCCWAFATTAITEAANTLYSKSFTSLSDQEICDCADSGDTPGCVGGDPRNGLK 176
Query: 120 AIIKMGGVQLESDYPYEADNNNCRMN 43
++ + G + DYPYE N N
Sbjct: 177 -MVHLRGQSSDGDYPYEEYRANTTGN 201
>AL021497-1|CAA16404.1| 382|Caenorhabditis elegans Hypothetical
protein Y51A2D.1 protein.
Length = 382
Score = 38.7 bits (86), Expect(2) = 1e-08
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -1
Query: 231 QFAIKHNELINLSEQQMIDC--DFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN 58
+F K N ++ S+Q+M DC D AGC GG L E I G+ E DYP E D N
Sbjct: 212 EFLAKLNMFLSFSDQEMCDCATDGTKAGCAGGGLMWGVEYAIN-NGLASEFDYP-EFDQN 269
Score = 35.9 bits (79), Expect(2) = 1e-08
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAI 220
+KNQG C CW FA LE+ +A+
Sbjct: 161 IKNQGQCACCWGFAVTAMLETIYAV 185
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 51.6 bits (118), Expect = 1e-07
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCD--------FVDAGCNGGL 139
+ +Q CG CWAF+ + +ES FAI+ +LS QQ++ CD + GC GG
Sbjct: 236 ILDQSTCGGCWAFSMISMIESFFAIQGYNTSSLSVQQLLTCDTKVDSTYGLANVGCKGGY 295
Query: 138 LHTAFEAIIKMGGVQLESDYPYEADNNNC 52
A + +++ + S P++ ++ +C
Sbjct: 296 FQIA-GSYLEVSAARDASLIPFDLEDTSC 323
>Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical
protein C50F4.3 protein.
Length = 374
Score = 50.0 bits (114), Expect = 3e-07
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDC-DFVDAGCNGGLLHTAFEA 118
+K Q C CW FA E+ + + +NLSEQ++ DC GCNGG E
Sbjct: 160 IKTQDSCACCWGFAATAVAEAALTVHLKKAMNLSEQEVCDCAPKHGPGCNGGDPVDGLEY 219
Query: 117 IIKMGGVQLESDYPYEADNN 58
I +M G+ +YP+ + +
Sbjct: 220 IKEM-GLTGGKEYPFNVNRS 238
>Z81103-3|CAB03209.1| 467|Caenorhabditis elegans Hypothetical
protein M04G12.2 protein.
Length = 467
Score = 47.2 bits (107), Expect = 2e-06
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = -1
Query: 276 CGACWAFATLGSLESQFAIKHN---ELINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKM 106
CG+CW F T G+L +F + + LS Q++IDC+ C GG + E K+
Sbjct: 248 CGSCWVFGTTGALNDRFNVARKGRWPMTQLSPQEIIDCN-GKGNCQGGEIGNVLEH-AKI 305
Query: 105 GGVQLESDYPYEADNNNC 52
G+ E Y A N C
Sbjct: 306 QGLVEEGCNVYRATNGEC 323
>U50313-3|AAA92327.1| 335|Caenorhabditis elegans Cysteine protease
related protein 4 protein.
Length = 335
Score = 46.8 bits (106), Expect = 3e-06
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = -1
Query: 297 SVKNQGMCGACWAFATLGSLESQFAIKHNELIN--LSEQQMID-CDFVDAGCNGGLLHTA 127
++++Q CG+CWAFA + +F I N +N LS + ++ C GC GG A
Sbjct: 99 NIRDQSDCGSCWAFAAAEAASDRFCIASNGAVNTLLSAEDVLSCCSNCGYGCEGGYPINA 158
Query: 126 FEAIIKMG 103
++ ++K G
Sbjct: 159 WKYLVKSG 166
>L39926-1|AAA98783.1| 335|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 335
Score = 46.8 bits (106), Expect = 3e-06
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = -1
Query: 297 SVKNQGMCGACWAFATLGSLESQFAIKHNELIN--LSEQQMID-CDFVDAGCNGGLLHTA 127
++++Q CG+CWAFA + +F I N +N LS + ++ C GC GG A
Sbjct: 99 NIRDQSDCGSCWAFAAAEAASDRFCIASNGAVNTLLSAEDVLSCCSNCGYGCEGGYPINA 158
Query: 126 FEAIIKMG 103
++ ++K G
Sbjct: 159 WKYLVKSG 166
>L39895-1|AAA98785.1| 335|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 335
Score = 46.8 bits (106), Expect = 3e-06
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = -1
Query: 297 SVKNQGMCGACWAFATLGSLESQFAIKHNELIN--LSEQQMID-CDFVDAGCNGGLLHTA 127
++++Q CG+CWAFA + +F I N +N LS + ++ C GC GG A
Sbjct: 99 NIRDQSDCGSCWAFAAAEAASDRFCIASNGAVNTLLSAEDVLSCCSNCGYGCEGGYPINA 158
Query: 126 FEAIIKMG 103
++ ++K G
Sbjct: 159 WKYLVKSG 166
>U41556-3|AAM51519.1| 378|Caenorhabditis elegans Cysteine protease
related protein6, isoform b protein.
Length = 378
Score = 46.0 bits (104), Expect = 5e-06
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAI-KHNEL-INLSEQQMID-CDFVDAGCNGGLLHTAF 124
+++Q CG+CWAF + ++ + I H EL + LS ++ C GCNGG A+
Sbjct: 123 IRDQSSCGSCWAFGAVEAMSDRICIASHGELQVTLSADDLLSCCKSCGFGCNGGDPLAAW 182
Query: 123 EAIIKMGGVQLESDYPYEADNNNCR 49
+K G+ S+Y NN C+
Sbjct: 183 RYWVK-DGIVTGSNY---TANNGCK 203
>U41556-2|ABS19475.1| 369|Caenorhabditis elegans Cysteine protease
related protein6, isoform c protein.
Length = 369
Score = 46.0 bits (104), Expect = 5e-06
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAI-KHNEL-INLSEQQMID-CDFVDAGCNGGLLHTAF 124
+++Q CG+CWAF + ++ + I H EL + LS ++ C GCNGG A+
Sbjct: 114 IRDQSSCGSCWAFGAVEAMSDRICIASHGELQVTLSADDLLSCCKSCGFGCNGGDPLAAW 173
Query: 123 EAIIKMGGVQLESDYPYEADNNNCR 49
+K G+ S+Y NN C+
Sbjct: 174 RYWVK-DGIVTGSNY---TANNGCK 194
>U41556-1|AAK39189.1| 379|Caenorhabditis elegans Cysteine protease
related protein6, isoform a protein.
Length = 379
Score = 46.0 bits (104), Expect = 5e-06
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAI-KHNEL-INLSEQQMID-CDFVDAGCNGGLLHTAF 124
+++Q CG+CWAF + ++ + I H EL + LS ++ C GCNGG A+
Sbjct: 124 IRDQSSCGSCWAFGAVEAMSDRICIASHGELQVTLSADDLLSCCKSCGFGCNGGDPLAAW 183
Query: 123 EAIIKMGGVQLESDYPYEADNNNCR 49
+K G+ S+Y NN C+
Sbjct: 184 RYWVK-DGIVTGSNY---TANNGCK 204
>L39939-1|AAA98789.1| 379|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 379
Score = 46.0 bits (104), Expect = 5e-06
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAI-KHNEL-INLSEQQMID-CDFVDAGCNGGLLHTAF 124
+++Q CG+CWAF + ++ + I H EL + LS ++ C GCNGG A+
Sbjct: 124 IRDQSSCGSCWAFGAVEAMSDRICIASHGELQVTLSADDLLSCCKSCGFGCNGGDPLAAW 183
Query: 123 EAIIKMGGVQLESDYPYEADNNNCR 49
+K G+ S+Y NN C+
Sbjct: 184 RYWVK-DGIVTGSNY---TANNGCK 204
>L39894-1|AAA98787.1| 379|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 379
Score = 46.0 bits (104), Expect = 5e-06
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAI-KHNEL-INLSEQQMID-CDFVDAGCNGGLLHTAF 124
+++Q CG+CWAF + ++ + I H EL + LS ++ C GCNGG A+
Sbjct: 124 IRDQSSCGSCWAFGAVEAMSDRICIASHGELQVTLSADDLLSCCKSCGFGCNGGDPLAAW 183
Query: 123 EAIIKMGGVQLESDYPYEADNNNCR 49
+K G+ S+Y NN C+
Sbjct: 184 RYWVK-DGIVTGSNY---TANNGCK 204
>Z81070-2|CAB03007.1| 491|Caenorhabditis elegans Hypothetical
protein F26E4.3 protein.
Length = 491
Score = 45.2 bits (102), Expect = 9e-06
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAIKHNELIN--LSEQQMIDCD-FVDAGCNGGLLHTAF 124
V +QG CG+ W+ +T + AI IN LS QQ++ C+ GC GG L A+
Sbjct: 240 VADQGDCGSSWSVSTTAISSDRLAIISEGRINSTLSSQQLLSCNQHRQKGCEGGYLDRAW 299
Query: 123 EAIIKMGGVQLESDYPY 73
I K+G V + YPY
Sbjct: 300 WYIRKLGVVG-DHCYPY 315
>U80843-7|AAB37968.1| 150|Caenorhabditis elegans Hypothetical
protein C32B5.13 protein.
Length = 150
Score = 44.8 bits (101), Expect = 1e-05
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = -1
Query: 207 LINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEA-DNNNCRMNSNK 34
+++ SEQQ+IDC + C +L F IK GV E+DYPY +N C+ + NK
Sbjct: 10 VLSFSEQQIIDCGNFTSPCQENILSHEF---IKKNGVVTEADYPYVGKENEKCKYDENK 65
>L39927-1|AAA98784.1| 344|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 344
Score = 39.1 bits (87), Expect = 6e-04
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = -1
Query: 297 SVKNQGMCGACWAFATLGSLESQFAIKHNELIN--LSEQQMIDC----DFVDAGCNGGLL 136
++++Q CG+CWAFA ++ + I N +N LS + ++ C GC GG
Sbjct: 100 NIRDQSDCGSCWAFAAAEAISDRTCIASNGAVNTLLSSEDLLSCCTGMFSCGNGCEGGYP 159
Query: 135 HTAFEAIIKMG 103
A++ +K G
Sbjct: 160 IQAWKWWVKHG 170
>L39896-1|AAA98786.1| 344|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 344
Score = 39.1 bits (87), Expect = 6e-04
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = -1
Query: 297 SVKNQGMCGACWAFATLGSLESQFAIKHNELIN--LSEQQMIDC----DFVDAGCNGGLL 136
++++Q CG+CWAFA ++ + I N +N LS + ++ C GC GG
Sbjct: 100 NIRDQSDCGSCWAFAAAEAISDRTCIASNGAVNTLLSSEDLLSCCTGMFSCGNGCEGGYP 159
Query: 135 HTAFEAIIKMG 103
A++ +K G
Sbjct: 160 IQAWKWWVKHG 170
>AF016426-3|AAB65346.1| 344|Caenorhabditis elegans Cysteine
protease related protein 5 protein.
Length = 344
Score = 39.1 bits (87), Expect = 6e-04
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = -1
Query: 297 SVKNQGMCGACWAFATLGSLESQFAIKHNELIN--LSEQQMIDC----DFVDAGCNGGLL 136
++++Q CG+CWAFA ++ + I N +N LS + ++ C GC GG
Sbjct: 100 NIRDQSDCGSCWAFAAAEAISDRTCIASNGAVNTLLSSEDLLSCCTGMFSCGNGCEGGYP 159
Query: 135 HTAFEAIIKMG 103
A++ +K G
Sbjct: 160 IQAWKWWVKHG 170
>AC024844-4|AAK29958.1| 421|Caenorhabditis elegans Hypothetical
protein Y65B4A.2 protein.
Length = 421
Score = 39.1 bits (87), Expect = 6e-04
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -1
Query: 297 SVKNQGMCGACWAFATLGSLESQFAIKHNELIN--LSEQQMIDCDFVDAGCNGG 142
+V NQG CG+C+A A G + I N LSE+ +I C V C GG
Sbjct: 156 NVPNQGGCGSCFAVAAAGVASDRACIHSNGTFKSLLSEEDIIGCCSVCGNCYGG 209
>Z81531-8|CAB04322.2| 344|Caenorhabditis elegans Hypothetical
protein F36D3.9 protein.
Length = 344
Score = 37.1 bits (82), Expect = 0.002
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAIKHN--ELINLSEQQMIDCDFVDA--GCNGGLLHTA 127
++ Q CG+CWAF+T + + I N + +S ++ C + GC+GG + A
Sbjct: 120 IREQSNCGSCWAFSTAEVISDRTCIASNGTQQPIISPTDLLTCCGMSCGEGCDGGFPYRA 179
Query: 126 FEAIIKMGGV 97
F+ + G V
Sbjct: 180 FQWWARRGVV 189
>Z75953-1|CAB00098.1| 400|Caenorhabditis elegans Hypothetical
protein F57F5.1 protein.
Length = 400
Score = 36.3 bits (80), Expect = 0.004
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAIKHN--ELINLSEQQMIDC--DFVDAGCNGGLLHTA 127
+++Q CG+CWA + ++ + I N ++++S + C GCNGG A
Sbjct: 165 IRDQSSCGSCWAVSAAETISDRICIASNAKTILSISADDINACCGMVCGNGCNGGYPIEA 224
Query: 126 FEAIIKMGGV 97
+ +K G V
Sbjct: 225 WRHYVKKGYV 234
>AF016426-2|AAB65345.1| 335|Caenorhabditis elegans Hypothetical
protein W07B8.4 protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.004
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Frame = -1
Query: 297 SVKNQGMCGACWAFATLGSLESQFAIKHNELIN--LSEQQMIDC---DF-VDAGCNGGLL 136
++++Q CG+CWA A ++ + I N +N LS + ++ C F GC GG
Sbjct: 91 NIRDQSHCGSCWAVAAAEAISDRTCIASNGDVNTLLSAEDILTCCTGKFNCGDGCEGGYP 150
Query: 135 HTAFEAIIKMG---GVQLESDY 79
A+ +K G G ES Y
Sbjct: 151 IQAWRYWVKNGLVTGGSFESQY 172
>Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 33.9 bits (74), Expect = 0.021
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAIKHN--ELINLSEQQMIDC--DFVDAGCNGG 142
++NQ CG+CWAF + + I+ N + +S + ++ C GC GG
Sbjct: 111 IRNQATCGSCWAFGAAEVISDRVCIQSNGTQQPVISVEDILSCCGTTCGYGCKGG 165
>Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 33.9 bits (74), Expect = 0.021
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAIKHN--ELINLSEQQMIDC--DFVDAGCNGG 142
++NQ CG+CWAF + + I+ N + +S + ++ C GC GG
Sbjct: 111 IRNQATCGSCWAFGAAEVISDRVCIQSNGTQQPVISVEDILSCCGTTCGYGCKGG 165
>L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 33.9 bits (74), Expect = 0.021
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAIKHN--ELINLSEQQMIDC--DFVDAGCNGG 142
++NQ CG+CWAF + + I+ N + +S + ++ C GC GG
Sbjct: 111 IRNQATCGSCWAFGAAEVISDRVCIQSNGTQQPVISVEDILSCCGTTCGYGCKGG 165
>L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 33.9 bits (74), Expect = 0.021
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAIKHN--ELINLSEQQMIDC--DFVDAGCNGG 142
++NQ CG+CWAF + + I+ N + +S + ++ C GC GG
Sbjct: 111 IRNQATCGSCWAFGAAEVISDRVCIQSNGTQQPVISVEDILSCCGTTCGYGCKGG 165
>AF003148-6|AAB54210.2| 306|Caenorhabditis elegans Cathepsin z
protein 1 protein.
Length = 306
Score = 33.9 bits (74), Expect = 0.021
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = -1
Query: 276 CGACWAFATLGSLESQFAIKHNEL---INLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKM 106
CG+CWAF +L + IK LS Q++IDC GG ++
Sbjct: 92 CGSCWAFGATSALADRINIKRKNAWPQAYLSVQEVIDCSGAGTCVMGGEPGGVYK-YAHE 150
Query: 105 GGVQLESDYPYEADNNNC 52
G+ E+ Y+A + C
Sbjct: 151 HGIPHETCNNYQARDGKC 168
>Z78012-1|CAB01410.2| 329|Caenorhabditis elegans Hypothetical
protein C52E4.1 protein.
Length = 329
Score = 30.3 bits (65), Expect = 0.26
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAI--KHNELINLSEQQMIDC--DFVDAGCNGG 142
+++Q CG+CWAF + + I K + +S ++ C GC GG
Sbjct: 104 IRDQATCGSCWAFGAAEMISDRTCIETKGAQQPIISPDDLLSCCGSSCGNGCEGG 158
>M74797-1|AAB88058.1| 329|Caenorhabditis elegans gut-specific
cysteine protease-1 protein.
Length = 329
Score = 30.3 bits (65), Expect = 0.26
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = -1
Query: 294 VKNQGMCGACWAFATLGSLESQFAI--KHNELINLSEQQMIDC--DFVDAGCNGG 142
+++Q CG+CWAF + + I K + +S ++ C GC GG
Sbjct: 104 IRDQATCGSCWAFGAAEMISDRTCIETKGAQQPIISPDDLLSCCGSSCGNGCEGG 158
>AL023828-22|CAA19467.2| 272|Caenorhabditis elegans Hypothetical
protein Y17G7B.19 protein.
Length = 272
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 95 CTPPILMMASNAVCNKPPLQPASTKSQSIICCSDRLINSLC 217
C P L NA C S ++S +CC D L++SLC
Sbjct: 131 CNPDELPFKWNAYC--------SQNAKSNMCCRDTLVDSLC 163
>Z68003-2|CAA91976.2| 560|Caenorhabditis elegans Hypothetical
protein E02H4.2 protein.
Length = 560
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 188 CSDRLINSLCLIAN*LSKLPRVANAQQAPHI 280
C+ +N LC ++ PR NAQ +P++
Sbjct: 148 CNQYQMNKLCCVSPPYQYQPRTPNAQSSPNL 178
>U11245-1|AAA96833.1| 198|Caenorhabditis elegans cysteine protease
protein.
Length = 198
Score = 26.2 bits (55), Expect = 4.2
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = -1
Query: 270 ACWAFATLGSLESQFAIKHNE--LINLSEQQMIDCDFVDAG--CNGGLLHTAFEAIIKMG 103
+CWA + ++ + I N ++++S + C + G CNGG A+ +K G
Sbjct: 1 SCWAVSAAETISDRICIASNAKTILSISADDINACCGMVCGNGCNGGYPIEAWRHYVKKG 60
Query: 102 GV 97
V
Sbjct: 61 YV 62
>L22447-1|AAB00354.1| 133|Caenorhabditis elegans cysteine protease
protein.
Length = 133
Score = 26.2 bits (55), Expect = 4.2
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = -1
Query: 270 ACWAFATLGSLESQFAIKHNE--LINLSEQQMIDCDFVDAG--CNGGLLHTAFEAIIKMG 103
+CWA + ++ + I N ++++S + C + G CNGG A+ +K G
Sbjct: 1 SCWAVSAAETISDRICIASNAKTILSISADDINACCGMVCGNGCNGGYPIEAWRHYVKKG 60
Query: 102 GV 97
V
Sbjct: 61 YV 62
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 25.8 bits (54), Expect = 5.6
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 119 ASNAVCNKPPLQPASTKSQSIICCSDRLINSLCLIAN*LS 238
ASN N + P +T SQS ICC + +L L N +S
Sbjct: 34 ASNLDANTLKVLPTTTSSQS-ICCDTGVAENLNLNLNSIS 72
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 25.8 bits (54), Expect = 5.6
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 119 ASNAVCNKPPLQPASTKSQSIICCSDRLINSLCLIAN*LS 238
ASN N + P +T SQS ICC + +L L N +S
Sbjct: 34 ASNLDANTLKVLPTTTSSQS-ICCDTGVAENLNLNLNSIS 72
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 25.4 bits (53), Expect = 7.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 128 AVCNKPPLQPASTKSQSIICCSD 196
A+C+KP P++T S +C +D
Sbjct: 785 AICHKPEPTPSATPDFSQVCSND 807
>AC024857-3|AAK31568.6| 611|Caenorhabditis elegans Hypothetical
protein Y71G12A.2 protein.
Length = 611
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 93 LESDYPYEADNNNCRMNSNKFLV 25
LESDYP D++ R S+ F+V
Sbjct: 368 LESDYPEHVDSSRSRGQSSIFVV 390
>Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical
protein R12H7.1 protein.
Length = 386
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -2
Query: 158 PAVTAACCIQHSKPSLKWAAYSWKATIHTKQTITIA 51
P V A + P++ W SW++ IH + + +A
Sbjct: 106 PFVLALEALLFYVPTIVWRLLSWQSGIHVQSLVQMA 141
>U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein.
Length = 386
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -2
Query: 158 PAVTAACCIQHSKPSLKWAAYSWKATIHTKQTITIA 51
P V A + P++ W SW++ IH + + +A
Sbjct: 106 PFVLALEALLFYVPTIVWRLLSWQSGIHVQSLVQMA 141
>AL161712-21|CAC70129.2| 729|Caenorhabditis elegans Hypothetical
protein Y66D12A.5 protein.
Length = 729
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 138 LHTAFEAIIKMGGVQLESDY 79
LH FE +++ GG QL Y
Sbjct: 658 LHVEFEKLVRFGGTQLPIGY 677
>AL132877-7|CAC70108.1| 686|Caenorhabditis elegans Hypothetical
protein Y105E8B.2a protein.
Length = 686
Score = 25.0 bits (52), Expect = 9.7
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -2
Query: 119 PSLKWAAYSWKATIHTKQTIT 57
P++ AY+WK +HT + +T
Sbjct: 472 PAIAVIAYTWKNVMHTMEDLT 492
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,613,378
Number of Sequences: 27780
Number of extensions: 113719
Number of successful extensions: 419
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 405
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 302276744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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