Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13h08
(692 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-747|AAF59019.2| 323|Drosophila melanogaster CG8235-PA ... 257 9e-69
AY051662-1|AAK93086.1| 525|Drosophila melanogaster LD21116p pro... 156 2e-38
AE014296-2739|AAF49462.1| 525|Drosophila melanogaster CG4561-PA... 156 2e-38
AE014297-1611|AAN14338.1| 2347|Drosophila melanogaster CG7518-PB... 30 3.4
AE014297-1610|AAF54888.2| 2451|Drosophila melanogaster CG7518-PA... 30 3.4
BT024995-1|ABE01225.1| 265|Drosophila melanogaster IP09428p pro... 29 6.0
AE014296-3050|AAF49237.1| 265|Drosophila melanogaster CG12477-P... 29 6.0
BT025851-1|ABF85751.1| 571|Drosophila melanogaster IP14996p pro... 29 7.9
AY069311-1|AAL39456.1| 476|Drosophila melanogaster LD02491p pro... 29 7.9
AE014298-1097|AAS65276.1| 557|Drosophila melanogaster CG15332-P... 29 7.9
AE014298-1096|AAF46303.1| 571|Drosophila melanogaster CG15332-P... 29 7.9
AE014296-2101|AAF49953.1| 476|Drosophila melanogaster CG6811-PA... 29 7.9
>AE013599-747|AAF59019.2| 323|Drosophila melanogaster CG8235-PA
protein.
Length = 323
Score = 257 bits (630), Expect = 9e-69
Identities = 116/159 (72%), Positives = 136/159 (85%)
Frame = -3
Query: 477 VDVRKLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIVMV 298
VDV +LD R+GKIVE+ +HPDADSLY+EKIDCGE PRTVVSGLV VP++EM+ R+V+V
Sbjct: 161 VDVGRLDLRVGKIVEVGRHPDADSLYLEKIDCGEAAPRTVVSGLVKFVPLEEMQNRLVVV 220
Query: 297 LCNLKPVKMRGVTSEAMVMCASSAEKVEVLIPPPDAIPGDLVVCEGYPREPEAVLNPKKK 118
+CNLKP KMRGVTSEAMVMCAS+ EKVEVL PP A+PGDLV CEGYPR+P+A LNPKKK
Sbjct: 221 MCNLKPAKMRGVTSEAMVMCASTPEKVEVLSPPAGAVPGDLVHCEGYPRQPDAQLNPKKK 280
Query: 117 IFETCAPDLKTNNEKIACYKGNPIIVPGKGPIIAPTLIN 1
IFE+CAPDLKTN E +ACYKG + VPGKG ++A TL N
Sbjct: 281 IFESCAPDLKTNGELVACYKGAALHVPGKGNVVAQTLKN 319
>AY051662-1|AAK93086.1| 525|Drosophila melanogaster LD21116p
protein.
Length = 525
Score = 156 bits (379), Expect = 2e-38
Identities = 74/157 (47%), Positives = 108/157 (68%), Gaps = 2/157 (1%)
Frame = -3
Query: 465 KLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIVMVLCNL 286
+LD R+GK+VE+++HPDAD+LYV KID E PRT++SGLV V +E+ +R+V VLCNL
Sbjct: 366 RLDIRVGKVVEVARHPDADTLYVLKIDLAEAQPRTIISGLVKFVTEEELNQRLVAVLCNL 425
Query: 285 KPVKMRGVTSEAMVMCASSAEK--VEVLIPPPDAIPGDLVVCEGYPREPEAVLNPKKKIF 112
KP KMRG+ SE MV+C S+A+ VE ++ P A G + EG+ P+ LNPKKK++
Sbjct: 426 KPSKMRGILSEGMVLCTSNADHTVVEPIVLPATATAGSRLSFEGFSGTPDEQLNPKKKVW 485
Query: 111 ETCAPDLKTNNEKIACYKGNPIIVPGKGPIIAPTLIN 1
E + D KTN++ +A +K N ++ P +G ++ L N
Sbjct: 486 EKLSADFKTNSDGLAVWKDNFLLTP-EGEKLSSKLAN 521
>AE014296-2739|AAF49462.1| 525|Drosophila melanogaster CG4561-PA
protein.
Length = 525
Score = 156 bits (379), Expect = 2e-38
Identities = 74/157 (47%), Positives = 108/157 (68%), Gaps = 2/157 (1%)
Frame = -3
Query: 465 KLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIVMVLCNL 286
+LD R+GK+VE+++HPDAD+LYV KID E PRT++SGLV V +E+ +R+V VLCNL
Sbjct: 366 RLDIRVGKVVEVARHPDADTLYVLKIDLAEAQPRTIISGLVKFVTEEELNQRLVAVLCNL 425
Query: 285 KPVKMRGVTSEAMVMCASSAEK--VEVLIPPPDAIPGDLVVCEGYPREPEAVLNPKKKIF 112
KP KMRG+ SE MV+C S+A+ VE ++ P A G + EG+ P+ LNPKKK++
Sbjct: 426 KPSKMRGILSEGMVLCTSNADHTVVEPIVLPATATAGSRLSFEGFSGTPDEQLNPKKKVW 485
Query: 111 ETCAPDLKTNNEKIACYKGNPIIVPGKGPIIAPTLIN 1
E + D KTN++ +A +K N ++ P +G ++ L N
Sbjct: 486 EKLSADFKTNSDGLAVWKDNFLLTP-EGEKLSSKLAN 521
>AE014297-1611|AAN14338.1| 2347|Drosophila melanogaster CG7518-PB,
isoform B protein.
Length = 2347
Score = 29.9 bits (64), Expect = 3.4
Identities = 22/88 (25%), Positives = 34/88 (38%)
Frame = -3
Query: 384 CGEENPRTVVSGLVNHVPIDEMRERIVMVLCNLKPVKMRGVTSEAMVMCASSAEKVEVLI 205
C E + + V NH +E R+R+ L + + T E ++ V +
Sbjct: 908 CKENHSKKRVKKECNHARFNETRDRLRKKLSQIVNERKTKSTEETTPSKTKCSKPEPVAV 967
Query: 204 PPPDAIPGDLVVCEGYPREPEAVLNPKK 121
P P AIP P+ P + NP K
Sbjct: 968 PAPAAIP---------PKRPPSPFNPPK 986
>AE014297-1610|AAF54888.2| 2451|Drosophila melanogaster CG7518-PA,
isoform A protein.
Length = 2451
Score = 29.9 bits (64), Expect = 3.4
Identities = 22/88 (25%), Positives = 34/88 (38%)
Frame = -3
Query: 384 CGEENPRTVVSGLVNHVPIDEMRERIVMVLCNLKPVKMRGVTSEAMVMCASSAEKVEVLI 205
C E + + V NH +E R+R+ L + + T E ++ V +
Sbjct: 908 CKENHSKKRVKKECNHARFNETRDRLRKKLSQIVNERKTKSTEETTPSKTKCSKPEPVAV 967
Query: 204 PPPDAIPGDLVVCEGYPREPEAVLNPKK 121
P P AIP P+ P + NP K
Sbjct: 968 PAPAAIP---------PKRPPSPFNPPK 986
>BT024995-1|ABE01225.1| 265|Drosophila melanogaster IP09428p
protein.
Length = 265
Score = 29.1 bits (62), Expect = 6.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 577 GILNSCNNLGCFQQVCFTRY 636
GIL SCN++ CFQ +C R+
Sbjct: 118 GILPSCNHVFCFQCICTWRH 137
>AE014296-3050|AAF49237.1| 265|Drosophila melanogaster CG12477-PA
protein.
Length = 265
Score = 29.1 bits (62), Expect = 6.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 577 GILNSCNNLGCFQQVCFTRY 636
GIL SCN++ CFQ +C R+
Sbjct: 118 GILPSCNHVFCFQCICTWRH 137
>BT025851-1|ABF85751.1| 571|Drosophila melanogaster IP14996p
protein.
Length = 571
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -3
Query: 456 FRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRE 313
F+I +++ H A+ E GEENP V G+ + +D++RE
Sbjct: 482 FKIDSDIDVMSHAIAELTVAELSMLGEENP---VPGVDTELALDQLRE 526
>AY069311-1|AAL39456.1| 476|Drosophila melanogaster LD02491p
protein.
Length = 476
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -3
Query: 225 EKVEVLIPPP---DAIPGDLVVCEGYPREPEAVLNPKKKIFE 109
+ E+L P P D + GD V+ E EPE +NP + FE
Sbjct: 43 DDTELLAPSPLEKDVMVGDFVLAEDPELEPEEDVNPLEDDFE 84
>AE014298-1097|AAS65276.1| 557|Drosophila melanogaster CG15332-PB,
isoform B protein.
Length = 557
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -3
Query: 456 FRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRE 313
F+I +++ H A+ E GEENP V G+ + +D++RE
Sbjct: 468 FKIDSDIDVMSHAIAELTVAELSMLGEENP---VPGVDTELALDQLRE 512
>AE014298-1096|AAF46303.1| 571|Drosophila melanogaster CG15332-PA,
isoform A protein.
Length = 571
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -3
Query: 456 FRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRE 313
F+I +++ H A+ E GEENP V G+ + +D++RE
Sbjct: 482 FKIDSDIDVMSHAIAELTVAELSMLGEENP---VPGVDTELALDQLRE 526
>AE014296-2101|AAF49953.1| 476|Drosophila melanogaster CG6811-PA
protein.
Length = 476
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -3
Query: 225 EKVEVLIPPP---DAIPGDLVVCEGYPREPEAVLNPKKKIFE 109
+ E+L P P D + GD V+ E EPE +NP + FE
Sbjct: 43 DDTELLAPSPLEKDVMVGDFVLAEDPELEPEEDVNPLEDDFE 84
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,831,418
Number of Sequences: 53049
Number of extensions: 609186
Number of successful extensions: 1585
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1582
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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