Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc13g09
         (302 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021424-1|AAX33572.1| 1227|Drosophila melanogaster LD01809p pro...    29   0.85 
BT021338-1|AAX33486.1| 1227|Drosophila melanogaster RE01065p pro...    29   0.85 
AY069239-1|AAL39384.1|  688|Drosophila melanogaster GM01240p pro...    29   0.85 
AE014296-140|AAN11452.1|  688|Drosophila melanogaster CG13900-PB...    29   0.85 
AE014296-139|AAF47416.2| 1227|Drosophila melanogaster CG13900-PA...    29   0.85 
AY060454-1|AAL25493.1|  199|Drosophila melanogaster SD01736p pro...    27   6.0  
AE013599-1834|AAF58286.2|  199|Drosophila melanogaster CG18324-P...    27   6.0  
AE013599-1833|AAM70987.1|  307|Drosophila melanogaster CG18324-P...    27   6.0  

>BT021424-1|AAX33572.1| 1227|Drosophila melanogaster LD01809p protein.
          Length = 1227

 Score = 29.5 bits (63), Expect = 0.85
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 133  LFYKSIEDLIFKFRYKDAENHL-IFALTYHPKDYKFNELLKY 255
            ++   +++ +F  RY+ AEN L IFA   HP+      LL Y
Sbjct: 1010 VYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDY 1051


>BT021338-1|AAX33486.1| 1227|Drosophila melanogaster RE01065p protein.
          Length = 1227

 Score = 29.5 bits (63), Expect = 0.85
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 133  LFYKSIEDLIFKFRYKDAENHL-IFALTYHPKDYKFNELLKY 255
            ++   +++ +F  RY+ AEN L IFA   HP+      LL Y
Sbjct: 1010 VYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDY 1051


>AY069239-1|AAL39384.1|  688|Drosophila melanogaster GM01240p
           protein.
          Length = 688

 Score = 29.5 bits (63), Expect = 0.85
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 133 LFYKSIEDLIFKFRYKDAENHL-IFALTYHPKDYKFNELLKY 255
           ++   +++ +F  RY+ AEN L IFA   HP+      LL Y
Sbjct: 471 VYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDY 512


>AE014296-140|AAN11452.1|  688|Drosophila melanogaster CG13900-PB,
           isoform B protein.
          Length = 688

 Score = 29.5 bits (63), Expect = 0.85
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 133 LFYKSIEDLIFKFRYKDAENHL-IFALTYHPKDYKFNELLKY 255
           ++   +++ +F  RY+ AEN L IFA   HP+      LL Y
Sbjct: 471 VYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDY 512


>AE014296-139|AAF47416.2| 1227|Drosophila melanogaster CG13900-PA,
            isoform A protein.
          Length = 1227

 Score = 29.5 bits (63), Expect = 0.85
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 133  LFYKSIEDLIFKFRYKDAENHL-IFALTYHPKDYKFNELLKY 255
            ++   +++ +F  RY+ AEN L IFA   HP+      LL Y
Sbjct: 1010 VYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDY 1051


>AY060454-1|AAL25493.1|  199|Drosophila melanogaster SD01736p
           protein.
          Length = 199

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 55  VVLSENPLDSPAIGLQKQPLFETNRNLFYKSIEDLIFK 168
           V ++ +P D     +  QP+ E  R L YK + D   K
Sbjct: 113 VAVANSPFDVLTTRMYNQPVDEKGRGLMYKGLVDCFTK 150


>AE013599-1834|AAF58286.2|  199|Drosophila melanogaster CG18324-PA,
           isoform A protein.
          Length = 199

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 55  VVLSENPLDSPAIGLQKQPLFETNRNLFYKSIEDLIFK 168
           V ++ +P D     +  QP+ E  R L YK + D   K
Sbjct: 113 VAVANSPFDVLTTRMYNQPVDEKGRGLMYKGLVDCFTK 150


>AE013599-1833|AAM70987.1|  307|Drosophila melanogaster CG18324-PB,
           isoform B protein.
          Length = 307

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 55  VVLSENPLDSPAIGLQKQPLFETNRNLFYKSIEDLIFK 168
           V ++ +P D     +  QP+ E  R L YK + D   K
Sbjct: 221 VAVANSPFDVLTTRMYNQPVDEKGRGLMYKGLVDCFTK 258


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,932,119
Number of Sequences: 53049
Number of extensions: 207005
Number of successful extensions: 509
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 570126357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)