Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13g08
(500 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF005630-1|AAB70469.1| 1708|Drosophila melanogaster adenylyl cyc... 29 2.7
AE014298-2169|AAX52499.1| 1690|Drosophila melanogaster CG9210-PB... 29 2.7
AE014298-2168|AAF48468.1| 1690|Drosophila melanogaster CG9210-PA... 29 2.7
AF495537-1|AAM18059.1| 527|Drosophila melanogaster prolyl 4-hyd... 28 6.2
AE014297-4609|AAG22175.1| 527|Drosophila melanogaster CG1546-PA... 28 6.2
AE014297-241|AAG22215.2| 1674|Drosophila melanogaster CG2666-PB,... 28 6.2
AE014297-240|AAS65101.1| 1615|Drosophila melanogaster CG2666-PC,... 28 6.2
AE014297-239|AAN13280.1| 1615|Drosophila melanogaster CG2666-PA,... 28 6.2
>AF005630-1|AAB70469.1| 1708|Drosophila melanogaster adenylyl
cyclase isoform DAC9 protein.
Length = 1708
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/104 (24%), Positives = 44/104 (42%)
Frame = +3
Query: 72 PFNVIAENTSISIIVRNLGNCPNNKDRVKCCDLNYGGIPPGHVMCPPREITKKVFHYAKW 251
P V+ E I I ++L P + D + ++ +PP + PP T+ W
Sbjct: 627 PVIVVRERPKIIITTKSL---PGSLDSDEQPPVSPPLLPPAN---PPAAETRSKIKLKVW 680
Query: 252 VRNPNKYKRYSELIARQSEAGGASASLRENVNNQLHARDASQLH 383
+ P KR+ +L R S G +SA + + ++ +LH
Sbjct: 681 -KIPRFLKRFEDLTNRSSCGGSSSAGHLDKEREREREKEKEELH 723
>AE014298-2169|AAX52499.1| 1690|Drosophila melanogaster CG9210-PB,
isoform B protein.
Length = 1690
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/104 (24%), Positives = 44/104 (42%)
Frame = +3
Query: 72 PFNVIAENTSISIIVRNLGNCPNNKDRVKCCDLNYGGIPPGHVMCPPREITKKVFHYAKW 251
P V+ E I I ++L P + D + ++ +PP + PP T+ W
Sbjct: 627 PVIVVRERPKIIITTKSL---PGSLDSDEQPPVSPPLLPPAN---PPAAETRSKIKLKVW 680
Query: 252 VRNPNKYKRYSELIARQSEAGGASASLRENVNNQLHARDASQLH 383
+ P KR+ +L R S G +SA + + ++ +LH
Sbjct: 681 -KIPRFLKRFEDLTNRSSCGGSSSAGHLDKEREREREKEKEELH 723
>AE014298-2168|AAF48468.1| 1690|Drosophila melanogaster CG9210-PA,
isoform A protein.
Length = 1690
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/104 (24%), Positives = 44/104 (42%)
Frame = +3
Query: 72 PFNVIAENTSISIIVRNLGNCPNNKDRVKCCDLNYGGIPPGHVMCPPREITKKVFHYAKW 251
P V+ E I I ++L P + D + ++ +PP + PP T+ W
Sbjct: 627 PVIVVRERPKIIITTKSL---PGSLDSDEQPPVSPPLLPPAN---PPAAETRSKIKLKVW 680
Query: 252 VRNPNKYKRYSELIARQSEAGGASASLRENVNNQLHARDASQLH 383
+ P KR+ +L R S G +SA + + ++ +LH
Sbjct: 681 -KIPRFLKRFEDLTNRSSCGGSSSAGHLDKEREREREKEKEELH 723
>AF495537-1|AAM18059.1| 527|Drosophila melanogaster prolyl
4-hydroxylase alpha-relatedprotein PH4[alpha]SG2
protein.
Length = 527
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 270 YKRYSELIARQSEAGGASASLRENVNNQLHARDASQLHLLDWENFMGE 413
Y+RY E I R+ E + L + + + LHA + + DW++ + E
Sbjct: 60 YRRYVEQIKREHEWATSQLKLDDYLGHPLHAFRLIKRLVRDWDSLIFE 107
>AE014297-4609|AAG22175.1| 527|Drosophila melanogaster CG1546-PA,
isoform A protein.
Length = 527
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 270 YKRYSELIARQSEAGGASASLRENVNNQLHARDASQLHLLDWENFMGE 413
Y+RY E I R+ E + L + + + LHA + + DW++ + E
Sbjct: 60 YRRYVEQIKREHEWATSQLKLDDYLGHPLHAFRLIKRLVRDWDSLIFE 107
>AE014297-241|AAG22215.2| 1674|Drosophila melanogaster CG2666-PB,
isoform B protein.
Length = 1674
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = -1
Query: 260 VSNPLCVMKNLFGNLTRRAHDMSRRDAAVIEIAAL---YSIFVVWTIAQ 123
++N LCV+ +FG L+R + + R +I++AA+ + V+W + +
Sbjct: 216 LTNCLCVVPGIFGLLSRTSKEGKRFVKVIIDLAAVAAQVTGLVIWPLLE 264
>AE014297-240|AAS65101.1| 1615|Drosophila melanogaster CG2666-PC,
isoform C protein.
Length = 1615
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = -1
Query: 260 VSNPLCVMKNLFGNLTRRAHDMSRRDAAVIEIAAL---YSIFVVWTIAQ 123
++N LCV+ +FG L+R + + R +I++AA+ + V+W + +
Sbjct: 216 LTNCLCVVPGIFGLLSRTSKEGKRFVKVIIDLAAVAAQVTGLVIWPLLE 264
>AE014297-239|AAN13280.1| 1615|Drosophila melanogaster CG2666-PA,
isoform A protein.
Length = 1615
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = -1
Query: 260 VSNPLCVMKNLFGNLTRRAHDMSRRDAAVIEIAAL---YSIFVVWTIAQ 123
++N LCV+ +FG L+R + + R +I++AA+ + V+W + +
Sbjct: 216 LTNCLCVVPGIFGLLSRTSKEGKRFVKVIIDLAAVAAQVTGLVIWPLLE 264
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,051,941
Number of Sequences: 53049
Number of extensions: 442553
Number of successful extensions: 1180
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1784022528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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