Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13g01
(808 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC013317-1|AAH13317.1| 503|Homo sapiens NMD3 homolog (S. cerevi... 232 1e-60
AF132941-1|AAD27716.1| 503|Homo sapiens CGI-07 protein protein. 231 3e-60
BC018646-1|AAH18646.1| 1265|Homo sapiens PLCG2 protein protein. 32 2.1
BC014561-1|AAH14561.1| 1265|Homo sapiens PLCG2 protein protein. 32 2.1
BC011772-1|AAH11772.1| 1265|Homo sapiens PLCG2 protein protein. 32 2.1
BC007565-1|AAH07565.1| 1265|Homo sapiens PLCG2 protein protein. 32 2.1
AB208914-1|BAD92151.1| 1278|Homo sapiens 1-phosphatidylinositol-... 32 2.1
X14034-1|CAA32194.1| 1252|Homo sapiens protein ( Human mRNA for ... 32 2.8
M37238-1|AAA60112.1| 1252|Homo sapiens PLC1 protein. 32 2.8
AY364256-1|AAQ76815.1| 1252|Homo sapiens phospholipase C gamma 2... 32 2.8
>BC013317-1|AAH13317.1| 503|Homo sapiens NMD3 homolog (S.
cerevisiae) protein.
Length = 503
Score = 232 bits (568), Expect = 1e-60
Identities = 115/251 (45%), Positives = 167/251 (66%), Gaps = 1/251 (0%)
Frame = -2
Query: 789 SKELTQQLGSISPICLVHRVTSTIHLIDANNGQVCDVSSTVYWRNPFSPICNPKQLVEYI 610
S +L Q LG+++ IC+ RVTS IHLID N QV D+ + +W +PF+ +C+PKQL E+I
Sbjct: 258 SPKLAQSLGNMNQICVCIRVTSAIHLIDPNTLQVADIDGSTFWSHPFNSLCHPKQLEEFI 317
Query: 609 VMDIDILKEHEKKSFPGQGMVSNKHVIADVWIVKASELGMDISPVHTRTHLGHILKPGDT 430
VM+ I+++ ++ + G GM+S KH + +VW+ K SE+ D RTHLGH+L PGD
Sbjct: 318 VMECSIVQDIKRAA--GAGMISKKHTLGEVWVQKTSEMNTD-KQYFCRTHLGHLLNPGDL 374
Query: 429 VLGYNLSESNVNDTNFDKLDRSNIPDVFLVKKFYGEKSARRRARAWKLKHMAEEFHEGLS 250
VLG++L+ N+ND + +K++ +PDV L+KK Y +++ R+R R WKLK +A E +
Sbjct: 375 VLGFDLANCNLNDEHVNKMNSDRVPDVVLIKKSY-DRTKRQRRRNWKLKELARERENMDT 433
Query: 249 STNDDYNDFLDDLEEDPAFRQNVNIFKDTSRIAVDTDEIDPSLPRITLAEMLDDLTI-ED 73
Y DFL+DLEED A R+NVNI++D S I V++D D PRI+LAEML+DL I +D
Sbjct: 434 DDERQYQDFLEDLEEDEAIRKNVNIYRD-SAIPVESDTDDEGAPRISLAEMLEDLHISQD 492
Query: 72 VEMSDV*RMLT 40
+ MLT
Sbjct: 493 ATGEEGASMLT 503
>AF132941-1|AAD27716.1| 503|Homo sapiens CGI-07 protein protein.
Length = 503
Score = 231 bits (564), Expect = 3e-60
Identities = 114/251 (45%), Positives = 167/251 (66%), Gaps = 1/251 (0%)
Frame = -2
Query: 789 SKELTQQLGSISPICLVHRVTSTIHLIDANNGQVCDVSSTVYWRNPFSPICNPKQLVEYI 610
S +L Q LG+++ IC+ RVTS IHLID N QV D+ + +W +PF+ +C+PKQL E+I
Sbjct: 258 SPKLAQSLGNMNQICVCIRVTSAIHLIDPNTLQVADIDGSTFWSHPFNSLCHPKQLEEFI 317
Query: 609 VMDIDILKEHEKKSFPGQGMVSNKHVIADVWIVKASELGMDISPVHTRTHLGHILKPGDT 430
V++ I+++ ++ + G GM+S KH + +VW+ K SE+ D RTHLGH+L PGD
Sbjct: 318 VIECSIVQDIKRAA--GAGMISKKHTLGEVWVQKTSEMNTD-KQYFCRTHLGHLLNPGDL 374
Query: 429 VLGYNLSESNVNDTNFDKLDRSNIPDVFLVKKFYGEKSARRRARAWKLKHMAEEFHEGLS 250
VLG++L+ N+ND + +K++ +PDV L+KK Y +++ R+R R WKLK +A E +
Sbjct: 375 VLGFDLANCNLNDEHVNKMNSDRVPDVVLIKKSY-DRTKRQRRRNWKLKELARERENMDT 433
Query: 249 STNDDYNDFLDDLEEDPAFRQNVNIFKDTSRIAVDTDEIDPSLPRITLAEMLDDLTI-ED 73
Y DFL+DLEED A R+NVNI++D S I V++D D PRI+LAEML+DL I +D
Sbjct: 434 DDERQYQDFLEDLEEDEAIRKNVNIYRD-SAIPVESDTDDEGAPRISLAEMLEDLHISQD 492
Query: 72 VEMSDV*RMLT 40
+ MLT
Sbjct: 493 ATGEEGASMLT 503
>BC018646-1|AAH18646.1| 1265|Homo sapiens PLCG2 protein protein.
Length = 1265
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -2
Query: 216 DLEEDPAFRQNVNIFKDTSRIAVDTDEIDPSLPRITLAEMLD 91
+L E +++N D SR+ VD EI+PS+P+ T+ + D
Sbjct: 738 ELLERYNMERDINSLYDVSRMYVDPSEINPSMPQRTVKALYD 779
>BC014561-1|AAH14561.1| 1265|Homo sapiens PLCG2 protein protein.
Length = 1265
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -2
Query: 216 DLEEDPAFRQNVNIFKDTSRIAVDTDEIDPSLPRITLAEMLD 91
+L E +++N D SR+ VD EI+PS+P+ T+ + D
Sbjct: 738 ELLERYNMERDINSLYDVSRMYVDPSEINPSMPQRTVKALYD 779
>BC011772-1|AAH11772.1| 1265|Homo sapiens PLCG2 protein protein.
Length = 1265
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -2
Query: 216 DLEEDPAFRQNVNIFKDTSRIAVDTDEIDPSLPRITLAEMLD 91
+L E +++N D SR+ VD EI+PS+P+ T+ + D
Sbjct: 738 ELLERYNMERDINSLYDVSRMYVDPSEINPSMPQRTVKALYD 779
>BC007565-1|AAH07565.1| 1265|Homo sapiens PLCG2 protein protein.
Length = 1265
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -2
Query: 216 DLEEDPAFRQNVNIFKDTSRIAVDTDEIDPSLPRITLAEMLD 91
+L E +++N D SR+ VD EI+PS+P+ T+ + D
Sbjct: 738 ELLERYNMERDINSLYDVSRMYVDPSEINPSMPQRTVKALYD 779
>AB208914-1|BAD92151.1| 1278|Homo sapiens
1-phosphatidylinositol-4,5-bisphosphate
phosphodiesterase gamma 2 variant protein.
Length = 1278
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -2
Query: 216 DLEEDPAFRQNVNIFKDTSRIAVDTDEIDPSLPRITLAEMLD 91
+L E +++N D SR+ VD EI+PS+P+ T+ + D
Sbjct: 751 ELLERYNMERDINSLYDVSRMYVDPSEINPSMPQRTVKALYD 792
>X14034-1|CAA32194.1| 1252|Homo sapiens protein ( Human mRNA for
phospholipase C. ).
Length = 1252
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -2
Query: 189 QNVNIFKDTSRIAVDTDEIDPSLPRITLAEMLD 91
+++N D SR+ VD EI+PS+P+ T+ + D
Sbjct: 747 RDINSLYDVSRMYVDPSEINPSMPQRTVKALYD 779
>M37238-1|AAA60112.1| 1252|Homo sapiens PLC1 protein.
Length = 1252
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -2
Query: 189 QNVNIFKDTSRIAVDTDEIDPSLPRITLAEMLD 91
+++N D SR+ VD EI+PS+P+ T+ + D
Sbjct: 747 RDINSLYDVSRMYVDPSEINPSMPQRTVKALYD 779
>AY364256-1|AAQ76815.1| 1252|Homo sapiens phospholipase C gamma 2
protein.
Length = 1252
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -2
Query: 189 QNVNIFKDTSRIAVDTDEIDPSLPRITLAEMLD 91
+++N D SR+ VD EI+PS+P+ T+ + D
Sbjct: 747 RDINSLYDVSRMYVDPSEINPSMPQRTVKALYD 779
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,887,983
Number of Sequences: 237096
Number of extensions: 2381328
Number of successful extensions: 4187
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4179
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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