Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13e24
(777 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria gla... 115 2e-24
UniRef50_Q1ZBI5 Cluster: Putative uncharacterized protein; n=1; ... 83 1e-14
UniRef50_Q9U4W1 Cluster: Pol-like protein; n=1; Aedes aegypti|Re... 80 7e-14
UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila melanogast... 78 2e-13
UniRef50_Q24363 Cluster: Putative ORF2; n=2; melanogaster subgro... 78 2e-13
UniRef50_UPI00015B43F6 Cluster: PREDICTED: similar to pol-like p... 77 5e-13
UniRef50_UPI0000D57951 Cluster: PREDICTED: similar to RNA-direct... 74 3e-12
UniRef50_Q868R0 Cluster: Reverse transcriptase; n=1; Anopheles g... 72 1e-11
UniRef50_UPI0000D57919 Cluster: PREDICTED: hypothetical protein,... 69 1e-10
UniRef50_Q868S4 Cluster: Reverse transcriptase; n=1; Anopheles g... 66 1e-09
UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles g... 65 2e-09
UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:... 62 2e-08
UniRef50_Q868Q6 Cluster: Reverse transcriptase; n=3; Anopheles g... 62 2e-08
UniRef50_UPI00015B43EC Cluster: PREDICTED: similar to pol-like p... 61 3e-08
UniRef50_Q868S6 Cluster: Reverse transcriptase; n=2; Culicidae|R... 59 1e-07
UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase fr... 58 3e-07
UniRef50_Q9TYX8 Cluster: Putative uncharacterized protein R11E3.... 57 6e-07
UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr... 55 2e-06
UniRef50_Q868R6 Cluster: Reverse transcriptase; n=1; Anopheles g... 54 4e-06
UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Re... 54 5e-06
UniRef50_Q6UJ39 Cluster: Pol protein; n=1; Drosophila virilis|Re... 53 7e-06
UniRef50_Q9N9Z1 Cluster: Endonuclease/reverse transcriptase; n=1... 52 1e-05
UniRef50_Q8MY33 Cluster: Reverse transcriptase; n=9; Obtectomera... 52 2e-05
UniRef50_O18558 Cluster: Lian-Aa1 retrotransposon protein; n=1; ... 52 2e-05
UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile... 52 2e-05
UniRef50_Q9Y026 Cluster: NL1Tc; n=2; Trypanosoma cruzi|Rep: NL1T... 52 2e-05
UniRef50_Q4QQE9 Cluster: Endonuclease-reverse transcriptase; n=1... 52 2e-05
UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotei... 51 3e-05
UniRef50_UPI0000D5790F Cluster: PREDICTED: similar to RNA-direct... 51 3e-05
UniRef50_Q9BLH9 Cluster: TRASSc4 protein; n=2; Samia cynthia|Rep... 51 4e-05
UniRef50_UPI00015B4771 Cluster: PREDICTED: similar to secreted p... 50 5e-05
UniRef50_Q4QQE2 Cluster: Endonuclease-reverse transcriptase; n=3... 50 6e-05
UniRef50_UPI0000D5776D Cluster: PREDICTED: similar to Hypothetic... 48 2e-04
UniRef50_Q2GM30 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04
UniRef50_A6R8Y2 Cluster: Predicted protein; n=5; Onygenales|Rep:... 48 3e-04
UniRef50_Q2GYS3 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04
UniRef50_Q868S0 Cluster: Reverse transcriptase; n=2; Anopheles g... 47 5e-04
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 46 8e-04
UniRef50_UPI0000D57891 Cluster: PREDICTED: similar to Hypothetic... 46 0.001
UniRef50_O46184 Cluster: Reverse transcriptase; n=2; Drosophila ... 46 0.001
UniRef50_Q2HI82 Cluster: Putative uncharacterized protein; n=3; ... 46 0.001
UniRef50_Q9BLI0 Cluster: TRASSc3 protein; n=1; Samia cynthia|Rep... 45 0.002
UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-direct... 45 0.002
UniRef50_A7T2B1 Cluster: Predicted protein; n=1; Nematostella ve... 45 0.002
UniRef50_Q2GN74 Cluster: Putative uncharacterized protein; n=3; ... 44 0.003
UniRef50_Q2GMV1 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_UPI00015B4772 Cluster: PREDICTED: similar to pol-like p... 44 0.006
UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx mori... 44 0.006
UniRef50_UPI00015B4820 Cluster: PREDICTED: similar to pol-like p... 38 0.008
UniRef50_UPI00015B43B0 Cluster: PREDICTED: similar to reverse tr... 43 0.010
UniRef50_Q86GH0 Cluster: Pol protein; n=1; Drosophila americana|... 43 0.010
UniRef50_A7REU6 Cluster: Predicted protein; n=3; Nematostella ve... 43 0.010
UniRef50_UPI0000E4771B Cluster: PREDICTED: similar to ependymin-... 42 0.013
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 42 0.013
UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TR... 40 0.052
UniRef50_A7TCP1 Cluster: Predicted protein; n=4; Nematostella ve... 40 0.069
UniRef50_UPI0000D578E5 Cluster: PREDICTED: similar to Hypothetic... 40 0.092
UniRef50_UPI0000D578E3 Cluster: PREDICTED: similar to Hypothetic... 40 0.092
UniRef50_Q868R8 Cluster: Reverse transcriptase; n=1; Anopheles g... 39 0.12
UniRef50_Q6J4U7 Cluster: Pol protein; n=9; cellular organisms|Re... 39 0.16
UniRef50_A7SZ72 Cluster: Predicted protein; n=1; Nematostella ve... 39 0.16
UniRef50_Q2H8L4 Cluster: Putative uncharacterized protein; n=1; ... 38 0.21
UniRef50_Q23PW5 Cluster: Endonuclease/Exonuclease/phosphatase fa... 38 0.37
UniRef50_A7RXT7 Cluster: Predicted protein; n=1; Nematostella ve... 38 0.37
UniRef50_A7RPI3 Cluster: Predicted protein; n=14; Nematostella v... 38 0.37
UniRef50_Q2GU99 Cluster: Putative uncharacterized protein; n=1; ... 38 0.37
UniRef50_UPI00015B4782 Cluster: PREDICTED: similar to Lian-Aa1 r... 37 0.49
UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup... 37 0.49
UniRef50_A7RML8 Cluster: Predicted protein; n=2; Nematostella ve... 37 0.49
UniRef50_UPI00015B48A6 Cluster: PREDICTED: similar to ORF2-encod... 36 0.85
UniRef50_A7ERU2 Cluster: Putative uncharacterized protein; n=12;... 36 0.85
UniRef50_A6R5U3 Cluster: Predicted protein; n=10; Ajellomyces ca... 36 0.85
UniRef50_A6R0B1 Cluster: Predicted protein; n=9; Ajellomyces cap... 36 0.85
UniRef50_UPI0000E4A69A Cluster: PREDICTED: similar to reverse tr... 36 1.1
UniRef50_Q2HX35 Cluster: LINE-type retrotransposon LIb DNA, comp... 36 1.1
UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-... 36 1.5
UniRef50_A7SP32 Cluster: Predicted protein; n=1; Nematostella ve... 36 1.5
UniRef50_A7S0T7 Cluster: Predicted protein; n=4; Nematostella ve... 36 1.5
UniRef50_A7EVG0 Cluster: Reverse transcriptase; n=8; Sclerotinia... 35 2.0
UniRef50_A6RFJ6 Cluster: Predicted protein; n=6; Ajellomyces cap... 35 2.0
UniRef50_A6RCU0 Cluster: Predicted protein; n=8; Ajellomyces cap... 35 2.0
UniRef50_A6R9N6 Cluster: Predicted protein; n=24; Ajellomyces ca... 35 2.0
UniRef50_Q2HUN6 Cluster: RNA-directed DNA polymerase (Reverse tr... 35 2.6
UniRef50_A7T299 Cluster: Predicted protein; n=3; Nematostella ve... 35 2.6
UniRef50_Q0TVA8 Cluster: Putative uncharacterized protein; n=1; ... 35 2.6
UniRef50_Q01379 Cluster: Contains reverse transcriptase and cys ... 35 2.6
UniRef50_A2QSP9 Cluster: Contig An08c0290, complete genome; n=7;... 35 2.6
UniRef50_Q97WP1 Cluster: Putative uncharacterized protein; n=1; ... 34 4.6
UniRef50_UPI0000E496D4 Cluster: PREDICTED: similar to CR1 Danio ... 33 6.0
UniRef50_UPI0000D578A9 Cluster: PREDICTED: similar to RNA-direct... 33 8.0
UniRef50_Q1E604 Cluster: Putative uncharacterized protein; n=1; ... 33 8.0
>UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria
glabrata|Rep: Pol-like protein - Biomphalaria glabrata
(Bloodfluke planorb)
Length = 1222
Score = 115 bits (276), Expect = 2e-24
Identities = 63/178 (35%), Positives = 95/178 (53%), Gaps = 1/178 (0%)
Frame = +2
Query: 5 ETWLKPDFVFK-IPGYSCLREDRADGYGGVCLLIRNSSTFSSFPLPSHSNCFSVIAAIVD 181
ET+LK F+ Y+ ED GGVC+L+++S L + + +
Sbjct: 36 ETFLKDCISFRSYRAYTKNVEDAERASGGVCILVKDSIPHERVELQTTLQAVAARITLHK 95
Query: 182 GICFVSIYVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDIL 361
I S+Y+P + ++++L+ LPRP++ILGDFN+H+T WGS+ +++ G L DI
Sbjct: 96 VITCCSLYLPPGAPLNRTDMEDLLKQLPRPYLILGDFNAHNTMWGSNNTDTRGRMLEDIF 155
Query: 362 DMYSLCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPIIIS 535
+ LCILN SPT L + IDL++C P L WS SDH+PIII+
Sbjct: 156 LQHDLCILNDASPTYLHPGTGSFTCIDLTVCVPGLLDDFKWSVSNDLRGSDHFPIIIT 213
>UniRef50_Q1ZBI5 Cluster: Putative uncharacterized protein; n=1;
Psychromonas sp. CNPT3|Rep: Putative uncharacterized
protein - Psychromonas sp. CNPT3
Length = 161
Score = 82.6 bits (195), Expect = 1e-14
Identities = 52/138 (37%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Frame = +2
Query: 5 ETWLKPDFVFKIPGYSCLREDRADGYGGVCLLIRNSSTFSSFPLPSHSNCFSVI--AAIV 178
ETWL D + PGY+ +REDR GGV + I TFS P P +V A I
Sbjct: 24 ETWLSDDIMLTFPGYNIIREDRITRGGGVLIGIGKGHTFSRVPTPRQEIMETVAKQARIG 83
Query: 179 D-GICFVSIYVP------HPSLQIFNE-IKNLISVLPRPFMILGDFNSHHTSWGSSVSNS 334
D + S+Y+P ++ F E + NL VLP P +ILGDFNSH WG +
Sbjct: 84 DLHVTIASVYIPPIANNEKEKIEKFKEDLGNLAVVLPGPLLILGDFNSHGVEWGGVKDDI 143
Query: 335 YGYELLDILDMYSLCILN 388
+ D D Y ILN
Sbjct: 144 RAPIIRDFCDWYKFSILN 161
>UniRef50_Q9U4W1 Cluster: Pol-like protein; n=1; Aedes aegypti|Rep:
Pol-like protein - Aedes aegypti (Yellowfever mosquito)
Length = 1208
Score = 79.8 bits (188), Expect = 7e-14
Identities = 40/109 (36%), Positives = 63/109 (57%)
Frame = +2
Query: 206 VPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCIL 385
+P L++FN +++L S P +++ D N HH WGS N G ++D+ + L IL
Sbjct: 115 IPDLKLRLFNALQSLSS----PILVMWDVNGHHPEWGSVSPNDRGSLIMDVAEKLDLVIL 170
Query: 386 NSGSPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPIII 532
N G+ T T+ G+ SAID+S+C+P + + L W+ SDH+PI I
Sbjct: 171 NDGA-TTFTR-GQRNSAIDVSLCSPSIVNRLLWTAKEDPMGSDHHPIFI 217
>UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila
melanogaster|Rep: Pol protein - Drosophila melanogaster
(Fruit fly)
Length = 1227
Score = 78.2 bits (184), Expect = 2e-13
Identities = 45/149 (30%), Positives = 78/149 (52%)
Frame = +2
Query: 86 GVCLLIRNSSTFSSFPLPSHSNCFSVIAAIVDGICFVSIYVPHPSLQIFNEIKNLISVLP 265
G+ +LI+ + + + S C ++ I V+ Y+P + ++I ++ L
Sbjct: 68 GIGVLIKRNVPHTYRNINSSILCSALQLNFEQVINIVNAYIPPSQIFSSSDISEILQNLN 127
Query: 266 RPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDL 445
++LGD NS WGS +N+ G ++ ++ SL +LN GSPT L+ + ID+
Sbjct: 128 GSTILLGDLNSWSPLWGSPRTNTRGKKIETVILENSLIVLNDGSPTHLS-THNTFTHIDI 186
Query: 446 SICTPQLASSLSWSTLCSTYNSDHYPIII 532
S+ +PQ+A SWS + + SDH+PI I
Sbjct: 187 SLISPQIAHMCSWSISDNLHGSDHFPITI 215
>UniRef50_Q24363 Cluster: Putative ORF2; n=2; melanogaster
subgroup|Rep: Putative ORF2 - Drosophila melanogaster
(Fruit fly)
Length = 1219
Score = 78.2 bits (184), Expect = 2e-13
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 2/167 (1%)
Frame = +2
Query: 47 YSCLREDRADGYGGVCLLIRNSSTFSSFPLPSHSNCFSVIAAIVDGICFVSIYVPHPSLQ 226
Y L + +GGV LL+ S + + ++ + S Y+ P+
Sbjct: 51 YKLLTNIATNRFGGVRLLVHKSIQHTVLNITIDIEAIAINIESKLKLNIFSTYIS-PTKN 109
Query: 227 IFNE-IKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPT 403
I N+ + N ++ P +I GDFN H WGS +N G +D L +LN SPT
Sbjct: 110 ITNQTLHNTFNIQQTPSLITGDFNGWHHPWGSPTTNKRGKITHRFIDNMHLILLNDKSPT 169
Query: 404 RLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPIIIS-FP 541
+ + IDL++C+P LA W L + SDH+PII + FP
Sbjct: 170 HFS-THNTYTHIDLTLCSPILAPHAKWKILNDLHGSDHFPIITTLFP 215
>UniRef50_UPI00015B43F6 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 963
Score = 77.0 bits (181), Expect = 5e-13
Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 9/186 (4%)
Frame = +2
Query: 5 ETWLKPDFVFKIPGYSCLREDR-ADGYGG-VCLLIRNSSTFSSFPLPSHSNCFSVIAAIV 178
ETWL + ++ ++ R DR D +GG + +RN+ +F + PL N F ++ +
Sbjct: 38 ETWLNSQDIVRLKNFNISRIDRLTDTHGGGLITAVRNNLSFKNIPLTEKFNGFEILTTEI 97
Query: 179 DG----ICFVSIYVPHPSLQIFNEIKNLISVLPR--PFMILGDFNSHHTSWGSSVSNSYG 340
I +++Y H IKNLI + +I GDFN+HH+ W + G
Sbjct: 98 KYHKKIITVINLYRDHRIRTEIKSIKNLIKYITEFNKVIICGDFNAHHSMWSVGKEDHIG 157
Query: 341 YELLDILDMYSLCILNSG-SPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDH 517
+ + +L ILN T + KP + D+S + L WS L DH
Sbjct: 158 KHIASEITHTNLVILNDPFRATLIPKPQNKPGSPDISAISLNLIHKTEWSLLGDALGGDH 217
Query: 518 YPIIIS 535
P+ I+
Sbjct: 218 LPVSIT 223
>UniRef50_UPI0000D57951 Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=2; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 971
Score = 74.1 bits (174), Expect = 3e-12
Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 4/152 (2%)
Frame = +2
Query: 86 GVCLLIRNSSTFSSFPLPS---HSNCFSVIAAIVDGICFVSIYVPHPSLQIFNEIKNLIS 256
GV +LI+ FS LP+ H +C +V I I Y P + NE+ +
Sbjct: 69 GVAILIKKGFAFSEHQLPNNLQHLDCIAVDTYIDSNIITFFTYYNSPRQCLSNELMQYAA 128
Query: 257 VLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISA 436
LP+ +ILGDFN+ HT +G +++N G+ L+D + L + + SPT + E S
Sbjct: 129 SLPKA-IILGDFNARHTDFGDTLTNRNGHILIDAISNLPLYRIPNSSPTHINH-WEGYSI 186
Query: 437 IDLSICTPQLASSLSWS-TLCSTYNSDHYPII 529
+D + T L++ S S + +T SDH P++
Sbjct: 187 VDHILVTDSLSNRASDSANIGTTITSDHLPLV 218
>UniRef50_Q868R0 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1173
Score = 72.1 bits (169), Expect = 1e-11
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Frame = +2
Query: 161 VIAAIVDGICFVSIYV-PHPSLQIFNEIKNL--ISVLPRPFMILG-DFNSHHTSWGSSVS 328
++AA + GI F+S Y P ++ F E N I V P ++LG DFN+ H +WGS+ +
Sbjct: 75 LVAADIGGITFISCYASPRMTVAEFEEFLNAVEIEVSAHPNVVLGGDFNAWHEAWGSART 134
Query: 329 NSYGYELLDILDMYSLCILNSGSPTRLTKPGEV-ISAIDLSICTPQLASSLSWSTLCSTY 505
G ELL+ ++ L +LN G+ + T G S ID++ +P + +W L S +
Sbjct: 135 KRKGEELLNTVEQLGLIVLNRGNTSTFTGRGIAGESVIDVTFASPSIVRYNTWEVLKSYW 194
Query: 506 NSDH 517
SDH
Sbjct: 195 YSDH 198
>UniRef50_UPI0000D57919 Cluster: PREDICTED: hypothetical protein,
partial; n=2; Tribolium castaneum|Rep: PREDICTED:
hypothetical protein, partial - Tribolium castaneum
Length = 263
Score = 68.9 bits (161), Expect = 1e-10
Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Frame = +2
Query: 86 GVCLLIRNSSTFSSFPLPSHSNCFSVIAAIVD----GICFVSIYVPHPSLQIFNEIKNLI 253
GV LL+ S S LP H + +AA + I F+ Y P P + ++ +
Sbjct: 64 GVTLLVSTSLASSQHILPPHLDHLQAVAATIHINNLNILFICYYNP-PLETVSTQLLDYT 122
Query: 254 SVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVIS 433
S R +ILGDFN+ HT +G ++SN+ G L L+ LC L + PT + G S
Sbjct: 123 STF-RHAVILGDFNARHTDFGDTISNTNGRHLTRSLNTLPLCRLRNQFPTLINHVG--TS 179
Query: 434 AIDLSICTPQLASSLSW-STLCSTYNSDHYPIIISF 538
+D I T L + S + +T SDH P++ +F
Sbjct: 180 IVDHIIVTDNLTHITNTDSFIGTTVTSDHLPLVSNF 215
>UniRef50_Q868S4 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 973
Score = 65.7 bits (153), Expect = 1e-09
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Frame = +2
Query: 164 IAAIVDGICFVSIYVPHP-SLQIFNEIKNLIS---VLPRPFMILGDFNSHHTSWGSSVSN 331
+ A+++ I F S Y P L+ F E+ IS P +I GDFN+ T WGS +N
Sbjct: 75 VIAVINKITFCSCYAPPRWDLEKFEEMLKRISDEVYDVNPIIISGDFNAWATEWGSKSTN 134
Query: 332 SYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNS 511
+ G +L+ +L ++N G + S IDL+ C+P LASS++W + S
Sbjct: 135 ARGNAVLEHFSRLNLVLVNVGFCPTFVRNSRT-SIIDLTFCSPALASSMNWRVSNAYTLS 193
Query: 512 DH 517
DH
Sbjct: 194 DH 195
>UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1201
Score = 64.9 bits (151), Expect = 2e-09
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Frame = +2
Query: 161 VIAAIVDGICFVSIYVPHPSLQIFNEIKNLISVLPRP------FMILGDFNSHHTSWGSS 322
++AA V GI F+S+Y P PSL +E + L+ + ++ GDFN+ H WGS
Sbjct: 140 LVAAQVAGITFISVYAP-PSLSA-HEFERLLGAIELEAASHSRVVVAGDFNAWHEEWGSG 197
Query: 323 VSNSYGYELLDILDMYSLCILNSG-SPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCS 499
+ G ELL ++ L ILN G PT + + S ID+S + ++ +WS +
Sbjct: 198 RNGQRGIELLQTVETLGLSILNQGRKPTFIGRGFAASSVIDVSFASREIVRPDTWSVIPF 257
Query: 500 TYNSDH 517
+ SDH
Sbjct: 258 S-RSDH 262
>UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:
ORF1 - Drosophila melanogaster (Fruit fly)
Length = 884
Score = 61.7 bits (143), Expect = 2e-08
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 22/204 (10%)
Frame = +2
Query: 2 SETWLKPDFVFKIPGYSCLREDRADGYGG-VCLLIRNSSTFSSFP-LPSH--SNC-FSVI 166
+ETWL F IP Y+ R DR + GG V + + N+ P + SH N +
Sbjct: 44 NETWLTHSDRFNIPEYTIYRNDRKESRGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQIN 103
Query: 167 AAIVDGICFVSIYVPHPSLQIF----------NEIKNL-------ISVLPRPFMILGDFN 295
+ SIY + + N +K+L IS + F+I GDFN
Sbjct: 104 TDSNSSLKIYSIYFAGNTSKCIPSSCDLSWDHNHLKSLYRSDLLKISQINGNFLICGDFN 163
Query: 296 SHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSICTPQLASS 475
S H +W + +N +G L ++ D+ IL PT + A L +C + +
Sbjct: 164 SRHRAWKCTRANGWGKILNELSDLGKFSILYPTQPTYIPH-NHKAKASTLDLCLTNIPNQ 222
Query: 476 LSWSTLCSTYNSDHYPIIISFP*N 547
L+ + +SDH P++I + N
Sbjct: 223 LANPAVMQELSSDHLPVVIKYSTN 246
>UniRef50_Q868Q6 Cluster: Reverse transcriptase; n=3; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1248
Score = 61.7 bits (143), Expect = 2e-08
Identities = 48/131 (36%), Positives = 67/131 (51%), Gaps = 12/131 (9%)
Frame = +2
Query: 161 VIAAIVDGICFVSIYV-PHPSLQIFNEIKNLISVLPR--PFMIL-GDFNSHHTSWGSSVS 328
++ A V+GI V YV P+ ++ F EI I +L R P ++L GDFN+ HT+WGS +
Sbjct: 75 IVVADVNGITIVYYYVKPNVGVRQFEEIMERIDILIRGHPRVLLAGDFNAWHTAWGSERT 134
Query: 329 NSYGYELLDILDMYSLCILNSGSPTRLTKPGEV-ISAIDL-----SICTPQLA--SSLSW 484
G LL +++ L +LN G+ G S ID+ SIC P LA S+ W
Sbjct: 135 KPKGIALLQLVNGLGLEVLNIGTSHTFRGCGSARPSRIDVAFASPSICRPDLAANSATCW 194
Query: 485 STLCSTYNSDH 517
L SDH
Sbjct: 195 RILSRYSYSDH 205
>UniRef50_UPI00015B43EC Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 1119
Score = 61.3 bits (142), Expect = 3e-08
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Frame = +2
Query: 32 FKIPGYSCLREDRA-DGYGGVCLLIRNSSTFSSFPLPSHSNCFSVIAAIVDG----ICFV 196
F + G+ +R DR+ + GG+ + I+ F L N V A VD I F
Sbjct: 31 FNLKGFETVRFDRSFNKGGGLAVCIKKGVIFEKIELGFKGNSLEVGAVTVDSNLGEILFT 90
Query: 197 SIY-VPHPSLQIFN-EIKNLISVLP----RPFMILGDFNSHHTSWGSSVSNSYGYELLDI 358
Y P+ I E L + + F++ GDFN+HH+ WGSS G +++
Sbjct: 91 VCYRAPNTDNNISKVEWCKLTDTVKQYGSKHFILAGDFNAHHSVWGSSKECCNGKVIVEN 150
Query: 359 LDMYSLCILNSGSPT--RLTKPGEVISAIDLSICTPQLASSLSW 484
LD + +LN+ SPT +++ G S IDL+ +P LA + +
Sbjct: 151 LDQGNFILLNNQSPTHVKISNSGCSYSNIDLTFVSPGLALKVEY 194
>UniRef50_Q868S6 Cluster: Reverse transcriptase; n=2; Culicidae|Rep:
Reverse transcriptase - Anopheles gambiae (African
malaria mosquito)
Length = 1049
Score = 59.3 bits (137), Expect = 1e-07
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Frame = +2
Query: 146 SNCFSVIA-AIVDGICFVSIYVPHPS--LQIFNE-IKNLISVLP--RPFMILGDFNSHHT 307
SN F A V+G+ F S Y P PS L+ F+ + NL++ L RP +I GDFN+
Sbjct: 66 SNTFEGFCIAEVNGVFFCSCYAP-PSWELERFHVMLDNLVAELDGHRPLVIAGDFNAWAV 124
Query: 308 SWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWS 487
WGS +NS G +L+ + + N+G+ + + S +D++ C+ L+ L+W
Sbjct: 125 EWGSKRTNSRGDAVLESFARLGVTLGNAGTTPTFNR-NKRTSIVDITFCSTTLSERLNWR 183
Query: 488 TLCSTYNSDH 517
+ SDH
Sbjct: 184 VSDALTLSDH 193
>UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase from
transposon BS; n=7; melanogaster subgroup|Rep: Probable
RNA-directed DNA polymerase from transposon BS -
Drosophila melanogaster (Fruit fly)
Length = 906
Score = 57.6 bits (133), Expect = 3e-07
Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 11/189 (5%)
Frame = +2
Query: 2 SETWLKPDFVFKIPGYSCLREDRA----DGYGGVCLLIRNSSTFSSFPL----PSHSNCF 157
+E LK KI GY+ R + GGV + +R +T FP H
Sbjct: 36 TELRLKRGETVKIYGYAYYPAYRPSLNNNSVGGVAVFVR--TTLRHFPQRVIETRHIQLS 93
Query: 158 SV-IAAIVDGICFVSIYVPHPSLQIFNE-IKNLISVLPRPFMILGDFNSHHTSWGSSVSN 331
SV +A + + F +IY PS +I ++I + +++ GD+N+ H WG + ++
Sbjct: 94 SVKVATGLGDLQFSAIYCS-PSTRIEERHFTDIIRACGQRYLVGGDWNARHWLWGDTCNS 152
Query: 332 SYGYELLDILDMYSLCILNSGSPTRLT-KPGEVISAIDLSICTPQLASSLSWSTLCSTYN 508
G EL + L + IL +GSPTR P S ID ++ + L+ T +
Sbjct: 153 PRGRELAEALSVTGAKILATGSPTRYPYVPSHTPSCIDFAV-YHGIPDHLATITQSWDLD 211
Query: 509 SDHYPIIIS 535
SDH P+IIS
Sbjct: 212 SDHLPLIIS 220
>UniRef50_Q9TYX8 Cluster: Putative uncharacterized protein R11E3.3;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein R11E3.3 - Caenorhabditis elegans
Length = 931
Score = 56.8 bits (131), Expect = 6e-07
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 7/117 (5%)
Frame = +2
Query: 197 SIYVPHPS-----LQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVS-NSYGYELLDI 358
++YVP S ++ + N+ + +I GD N+HH++W S S ++ G EL ++
Sbjct: 5 NVYVPPRSSSSNHARLMTDFSNIFQTKSKS-IISGDVNAHHSAWHSEGSEDTRGRELAEL 63
Query: 359 LDMY-SLCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPI 526
+D++ L I N TR IS+ D++ICT LA+ WSTL SDH P+
Sbjct: 64 IDLHPDLIIQNEQVHTRADTYS--ISSPDITICTADLATKCHWSTLYK-LGSDHIPM 117
>UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from
transposon X-element; n=1; Drosophila melanogaster|Rep:
Probable RNA-directed DNA polymerase from transposon
X-element - Drosophila melanogaster (Fruit fly)
Length = 908
Score = 55.2 bits (127), Expect = 2e-06
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 6/175 (3%)
Frame = +2
Query: 29 VFKIPGYSCLREDRADGYGGVCLLIRNSSTFSSFPLPSHSNCF-----SVIAAIVDGICF 193
+F Y+ + GG +LI+NS + FPL + +VI + I F
Sbjct: 48 LFGFVAYTANDPSGGNAKGGAAILIKNS--LAHFPLTPIATAKVQLAPAVIETALGPISF 105
Query: 194 VSIYVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYS 373
++Y P +E K+++ F++ GD+N+ H WG+ SN G L +++
Sbjct: 106 GAVYCPPRFAWTTDEFKDILEEFQTKFIVAGDWNASHWLWGAGRSNQRGIALANLVLNSE 165
Query: 374 LCILNSGSPTRLTKPGEVISA-IDLSICTPQLASSLSWSTLCSTYNSDHYPIIIS 535
+ L +G PTR ID ++ L + S + +SDH P++I+
Sbjct: 166 VDSLATGGPTRYPYGCRGSPGYIDFALTKGVLGIHANISAVVE-LSSDHLPLVIT 219
>UniRef50_Q868R6 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1022
Score = 54.0 bits (124), Expect = 4e-06
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Frame = +2
Query: 161 VIAAIVDGICFVSIYVPHP-SLQIFNEI-KNLISVLP--RPFMILGDFNSHHTSWGSSVS 328
++A V GI VS Y P ++Q F E+ N++ + F++ GDFN+ +SW +++
Sbjct: 75 MLAVEVGGILIVSAYAPPSWTVQEFEELLDNIVLTVSGSSKFVVAGDFNAWSSSWANTLG 134
Query: 329 ------NSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWST 490
G LL + ++N+G T +T E SAIDL+ + L + W
Sbjct: 135 ARGESQRLRGDTLLAAFAGLEMVLMNNGQDTFVTP--ERKSAIDLTFVSQSLMETTGWEV 192
Query: 491 LCSTYNSDHYPIIIS 535
L NSDH I+I+
Sbjct: 193 LPDYMNSDHIGILIT 207
>UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Rep:
GH03753p - Drosophila melanogaster (Fruit fly)
Length = 888
Score = 53.6 bits (123), Expect = 5e-06
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 10/188 (5%)
Frame = +2
Query: 2 SETWLKPDFVFKIPGYSCLREDRADG--YGGVCLLIRNSST---FSSFPLPSHSNCFSVI 166
SET L F IPGY + DG +GG +LIRN ++F ++ S+
Sbjct: 36 SETHLTNKNNFHIPGYLFYGTNHPDGKAHGGTGILIRNRIKHHHLNNFD-KNYLQSTSIA 94
Query: 167 AAIVDG-ICFVSIYVPHPSLQIF-NEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYG 340
+ +G ++Y P P I ++ + L F+ GD+N+ HT WGS + G
Sbjct: 95 LQLNNGSTTLAAVYCP-PRFPISEDQFMEFFNTLGDRFIAAGDYNAKHTHWGSRLVTPKG 153
Query: 341 YELLDILDM--YSLCILNSGSPTRL-TKPGEVISAIDLSICTPQLASSLSWSTLCSTYNS 511
+L + L L ++ G PT P ++ ID +I T + ++ + + +S
Sbjct: 154 KQLYNALTKPENKLDYVSPGKPTYWPADPRKIPDLIDFAI-TKHVPRNMVTAEALADLSS 212
Query: 512 DHYPIIIS 535
DH P+ ++
Sbjct: 213 DHSPVFLN 220
>UniRef50_Q6UJ39 Cluster: Pol protein; n=1; Drosophila virilis|Rep:
Pol protein - Drosophila virilis (Fruit fly)
Length = 891
Score = 53.2 bits (122), Expect = 7e-06
Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 7/184 (3%)
Frame = +2
Query: 2 SETWLKPDFVFKIPGYSCLREDRADGY---GGVCLLIRNSSTFSSFP---LPSHSNCFSV 163
SET + +IPGYS + + + GG +LI N + + P LP
Sbjct: 36 SETRFNFNSRVQIPGYSIITANSPQTHLCIGGAAILISNHIEYQALPGISLPQLQCAIVR 95
Query: 164 IAAIVDGICFVSIYVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGY 343
+ + G S Y P + ++ L + L F+I GD+N+ H WG+ G
Sbjct: 96 LRTDLGGANIASCYWPPNHAVLADDYVCLFNQLGENFLIGGDWNAKHRLWGNMRRCPRGS 155
Query: 344 ELLDIL-DMYSLCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHY 520
L +IL D +L + PT S +D I + L+ S + + +SDH
Sbjct: 156 ILANILMDSNKYNVLTTAEPTHFPSNSNRPSVLDFGIYAGISSHRLAISRV-TELHSDHL 214
Query: 521 PIII 532
P+++
Sbjct: 215 PLLV 218
>UniRef50_Q9N9Z1 Cluster: Endonuclease/reverse transcriptase; n=1;
Drosophila melanogaster|Rep: Endonuclease/reverse
transcriptase - Drosophila melanogaster (Fruit fly)
Length = 989
Score = 52.4 bits (120), Expect = 1e-05
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Frame = +2
Query: 170 AIVDGICFVSIYVP-HPSLQIFNE-IKNLISVLP--RPFMILGDFNSHHTSWGSSVSNSY 337
A + GI F S Y P S + F + ++ L++ RP +I GD N+ T WGS +SN+
Sbjct: 82 AKIRGIHFYSCYAPPSDSPEQFEDMLEKLVNHASGRRPTVIGGDLNAWATEWGSRISNTR 141
Query: 338 GYELLDILDMYSLCILNSG-SPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSD 514
G ++D +++ L +LN G PT G S ID++ + L + +W SD
Sbjct: 142 GRAVIDAMNLLDLVLLNDGFKPTFNNDRG--TSFIDVTFVSRVLVAGSNWMVHEDITLSD 199
Query: 515 H 517
H
Sbjct: 200 H 200
>UniRef50_Q8MY33 Cluster: Reverse transcriptase; n=9;
Obtectomera|Rep: Reverse transcriptase - Papilio xuthus
Length = 1053
Score = 52.0 bits (119), Expect = 2e-05
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Frame = +2
Query: 164 IAAIVDGICFVSIY-VPHPSLQIFNEIKNLISVL-----PRPFMILGDFNSHHTSWGSSV 325
+ A + G V +Y P +L F ++ + L P +++GDFN+ ++WGS+
Sbjct: 77 VGATIGGTLVVGVYCAPSMNLVEFEDLLERVGTLVGRNLPHSVLVMGDFNAKSSAWGSTS 136
Query: 326 SNSYGYELLDILDMYSLCILNSGS-PTRLTKPGEVISAIDLSICTPQLASSL-SWSTLCS 499
+N+ G L + LC+LN GS PT + G S +DL+ P A + W +
Sbjct: 137 TNARGAVLEEWALTSGLCLLNRGSRPTCVRTQGS--SIVDLTFACPATARRMYGWEVVEG 194
Query: 500 TYN-SDH 517
SDH
Sbjct: 195 VETLSDH 201
>UniRef50_O18558 Cluster: Lian-Aa1 retrotransposon protein; n=1;
Aedes aegypti|Rep: Lian-Aa1 retrotransposon protein -
Aedes aegypti (Yellowfever mosquito)
Length = 1189
Score = 52.0 bits (119), Expect = 2e-05
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Frame = +2
Query: 191 FVSIYVPHPSLQIFNEIKNLIS---VLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDIL 361
+ S+Y+PH ++ K ++ P ++ D N+HH WGSS N G L++ L
Sbjct: 87 YCSVYLPHDEPSPTDDFKRVVVHCVTKGLPLIVGSDANAHHIIWGSSDINLRGSSLMEYL 146
Query: 362 DMYSLCILNSGS-PTRLTKPGEVISAIDLSICTPQLASSL-SWSTLCSTYNSDH 517
L +LN G+ PT + E + +D+++C+ +++ L +W SDH
Sbjct: 147 SSTDLGLLNIGNRPTFMVSNREEV--LDITLCSNRISHELTNWHVSDEESLSDH 198
>UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile
element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA
polymerase from mobile element jockey - Drosophila
melanogaster (Fruit fly)
Length = 916
Score = 52.0 bits (119), Expect = 2e-05
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 6/182 (3%)
Frame = +2
Query: 2 SETWLKPDFVFKIPGYSCLREDRADGY--GGVCLLIRNSSTFSSF-PLPSHSNCFSVI-- 166
+ET ++ +PGY G GG ++I++ S P+ ++ + +
Sbjct: 38 TETHMRVGQRIYLPGYLMYHAHHPSGNSRGGSAVIIKSRLCHSPLTPISTNDRQIARVHL 97
Query: 167 AAIVDGICFVSIYVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYE 346
V + ++Y+P I ++ K++ + L F+ GD+N+ H WG+ S G
Sbjct: 98 QTSVGTVTVAAVYLPPAERWIVDDFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKM 157
Query: 347 LLDILDMYSLCILNSGSPTRLT-KPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYP 523
L +++ +L +G PT + P SA+D I L TL +SDH P
Sbjct: 158 LQEVIAHGQYQVLATGEPTFYSYNPLLTPSALDFFITCGYGMGRLDVQTL-QELSSDHLP 216
Query: 524 II 529
I+
Sbjct: 217 IL 218
>UniRef50_Q9Y026 Cluster: NL1Tc; n=2; Trypanosoma cruzi|Rep: NL1Tc -
Trypanosoma cruzi
Length = 327
Score = 51.6 bits (118), Expect = 2e-05
Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 14/186 (7%)
Frame = +2
Query: 5 ETWLKPDFVFKIP--GYSCLREDRADGYGGVCLLIRNSSTFSSFPL--PSHSNCFSVIAA 172
ETW + + + Y + R GGV +L+R + PL P H V+
Sbjct: 83 ETWKSSEQIASMHTGDYVLYAQSRIGKGGGVAVLVRKNLRSKRIPLTIPQHDTSLEVVVV 142
Query: 173 IVD-----GICFVSIYVPHPSLQIFNEIKNLISVLPR--PFMILGDFNSHHTSWGSSVSN 331
V + S Y+ P Q+ + L++ LP P ++ GDFN HH W +
Sbjct: 143 QVALDQNRDLIVASAYM-RPPPQVTQSFRRLVNCLPASSPLLLCGDFNMHHPQWEPFLET 201
Query: 332 S---YGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCST 502
S E L++ L ++N+ + S IDL+ + L S WS S
Sbjct: 202 SPSEVAAEFLELCTDAGLTLVNTPGEITYARGTRERSCIDLT-WSKHLTVS-DWSASVSP 259
Query: 503 YNSDHY 520
SDHY
Sbjct: 260 L-SDHY 264
>UniRef50_Q4QQE9 Cluster: Endonuclease-reverse transcriptase; n=1;
Schistosoma mansoni|Rep: Endonuclease-reverse
transcriptase - Schistosoma mansoni (Blood fluke)
Length = 940
Score = 51.6 bits (118), Expect = 2e-05
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Frame = +2
Query: 2 SETWLKPDFVFK---IPGYSCLREDRADGY--GGVCLLIRNSSTFSSFPLPSH-SNCFSV 163
+ETWL P + G++ +R DR GGV L IRN+ F+ SH S + +
Sbjct: 43 TETWLTPSIDSRELDFEGFTLVRADRTQTRKGGGVALFIRNAIPFTIIDSVSHESGTYEL 102
Query: 164 IAAIVD---GICFVSIYVPHPSLQIFNEIKNLISVLPRP--FMILGDFNSHHTSWGS--- 319
++ + +S+ PS + + N ++ L R +ILGDFN+ WG+
Sbjct: 103 VSCRLKCRGQELLLSLIYRSPSCEANEVLLNSLNTLSRSDRCLILGDFNAPMVDWGNLRT 162
Query: 320 -SVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDL 445
S +NS+ EL+D + +L + + TR PG S +DL
Sbjct: 163 ESSANSFEQELVDAVITCAL-VQHVKEATRY-DPGSASSLLDL 203
>UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1249
Score = 51.2 bits (117), Expect = 3e-05
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 7/171 (4%)
Frame = +2
Query: 50 SCLREDRADGYGG-VCLLIRNSSTFSSFPLPSHSNCFSVIAAI---VDGICFVSIYVPHP 217
+ + DR D GG V +LIR + + +C +V I I ++ Y P
Sbjct: 396 AAITRDRPDAAGGGVAILIRRNIRHRAINT-DFPDCEAVGVEIHTKSTPIRVIAFYAPPN 454
Query: 218 SLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGS 397
+ F+ + +L + P ++ GD N+ HTSWG +N G LL + +++CI
Sbjct: 455 PKEKFSSLHSLFNT-NIPTILAGDLNAKHTSWGCIHNNPAGQSLLKKIMKHNICIEPPLV 513
Query: 398 PTRLTKPGEVI---SAIDLSICTPQLASSLSWSTLCSTYNSDHYPIIISFP 541
PT PG +D+ + S W+T +SDH P+++ P
Sbjct: 514 PTHF--PGCATHDPDILDIFLTKNITLPSDPWTT--EDLSSDHNPVLVKIP 560
>UniRef50_UPI0000D5790F Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 932
Score = 51.2 bits (117), Expect = 3e-05
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +2
Query: 224 QIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPT 403
Q+ E++ ++ +I+GDFN+ +WGS + G L+D + I N+G
Sbjct: 57 QLLRELEGHLNSSGEECIIVGDFNAKSPAWGSKKEDERGRILMDWIAQRDYTIQNTGDEP 116
Query: 404 RLTKPGEVISAIDLSICTPQLASSL-SWSTLCSTYNSDHYPI 526
+ GE +S IDL+I + LA + +W L SDH I
Sbjct: 117 TFVR-GESVSNIDLTITSTGLADKIKNWKVLPEENLSDHRDI 157
>UniRef50_Q9BLH9 Cluster: TRASSc4 protein; n=2; Samia cynthia|Rep:
TRASSc4 protein - Samia cynthia (Cynthia moth)
(Ailanthus silkmoth)
Length = 640
Score = 50.8 bits (116), Expect = 4e-05
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Frame = +2
Query: 185 ICFVSIYVPH--PSLQIFNEIKNLISVLPRPFMILG-DFNSHHTSWGSSVSNSYGYELLD 355
I +S+Y P ++IK +I L +I+G D N+ + WGS N G E+
Sbjct: 39 IGIISVYFEDTKPLTPYLDKIKTIIEKLDTKKVIIGGDVNAWSSWWGSRRENDRGEEITG 98
Query: 356 ILDMYSLCILNSGS-PTRLTKPG--EVISAIDLSICTPQLASSL-SWSTLCSTYNSDH 517
+ +LN GS PT T G E S +D++IC+ Q+ S + W+ NSDH
Sbjct: 99 WITEEGYHVLNQGSIPTFYTIRGGKEYQSCVDITICSDQILSKIRGWTIDQELVNSDH 156
>UniRef50_UPI00015B4771 Cluster: PREDICTED: similar to secreted
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to secreted protein - Nasonia vitripennis
Length = 1163
Score = 50.4 bits (115), Expect = 5e-05
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +2
Query: 269 PFMILGDFNSHHTSWGSSVSNSYGYELLDILDMY-SLCILNSGSPTRLTKPGEVISAIDL 445
P +I GDFN+ H WGS + N G L L+ ILN TR+ S D+
Sbjct: 304 PLLISGDFNAQHNMWGSEIENGLGRTLRSALESSPHFYILNDKLATRIHSK---TSCPDI 360
Query: 446 SICTPQLASSLSWSTLCSTYNSDHYPI 526
S+ +P L + ++ + SDH+PI
Sbjct: 361 SLTSPDLYTCINLKMGEDSMGSDHFPI 387
>UniRef50_Q4QQE2 Cluster: Endonuclease-reverse transcriptase; n=3;
Bilateria|Rep: Endonuclease-reverse transcriptase -
Schistosoma mansoni (Blood fluke)
Length = 945
Score = 50.0 bits (114), Expect = 6e-05
Identities = 58/194 (29%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Frame = +2
Query: 2 SETWLKPDFVF--KIPGYSCLREDR--ADGYGGVCLLIRNSSTFSSFPLPSHSNCFS--V 163
+ETWL DF ++ GY CLR DR GGV L I NS S SH + S +
Sbjct: 48 TETWLVHDFDITPELSGYHCLRSDRHRCRKGGGVLLYIANSINIRSSVCESHDSGTSEAI 107
Query: 164 IAAIVDGICFVSIYVPHPSL-----QIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVS 328
+ G C ++ V + S E L S R +ILGDFN+ SW +
Sbjct: 108 SCELTVGCCTFALGVIYRSPICLADDFILEHIRLWSANNR-CLILGDFNAPDISWTEMTT 166
Query: 329 ----NSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWSTLC 496
NS+ LL+ + ++L + + PTR + S +DL + T + + + L
Sbjct: 167 KCSINSFDSRLLETVMEHAL-VQHVSKPTRF-GVNQGSSLLDL-VITHETEDIANLNILP 223
Query: 497 STYNSDHYPIIISF 538
NSDH + +F
Sbjct: 224 PLVNSDHAVLSFTF 237
>UniRef50_UPI0000D5776D Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Hypothetical 115 kDa protein in type I
retrotransposable element R1DM (ORF 2) - Tribolium
castaneum
Length = 973
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +2
Query: 275 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSIC 454
++ GDFN+ WG+ + G EL D++ + +LN G+ + G+ S ID++
Sbjct: 111 LVTGDFNAKSYLWGNVSEDKRGKELADLIGELEMWVLNQGNQPTFVR-GQSSSIIDITFA 169
Query: 455 TPQLASSL-SWSTLCSTYNSDHYPIIIS 535
+P++A + W DH PI+ +
Sbjct: 170 SPKVAQCVKGWHVHEDAPLGDHLPIVFA 197
>UniRef50_Q2GM30 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1567
Score = 48.0 bits (109), Expect = 3e-04
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Frame = +2
Query: 95 LLIRNSSTFSSFPLPSHSNCFSVIAAIVDGICFVSIYVPHPSLQIFNEIKNLISVLPRPF 274
L +R+ P+PS + I + VS+YV S + + I L R F
Sbjct: 489 LWVRSDIEVEQIPVPSADLTAARIRLPDRAVLMVSVYVEGGSDEALEDAMREIDRLIRRF 548
Query: 275 ----------MILGDFNSHHTSWG----SSVSNSYGYELLDILDMYSLC-ILNSGSPTRL 409
++ GDFN H WG S G +++++D +SLC +L G T+
Sbjct: 549 RNGTGTRTDIILAGDFNRHDQLWGGDDVSPRRQGEGDRIINLMDEHSLCSLLPRG--TKT 606
Query: 410 TKPGEVISAIDLSICTPQLASSLSWSTL--CSTYNSDHYPIIISF 538
+ G++ S IDL + + +LA L T+ C + SDH I +F
Sbjct: 607 WQSGDIESTIDLVLASAELADQLLRCTIHPCD-HGSDHRAIETAF 650
>UniRef50_A6R8Y2 Cluster: Predicted protein; n=5; Onygenales|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 1913
Score = 48.0 bits (109), Expect = 3e-04
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Frame = +2
Query: 263 PRPFMILGDFNSHHTSWGSSVSNS----YGYELLDILDMYSLCILNS-GSPTRLTKPGEV 427
P ++LGDFN HH W S+ + LL +++ + L +L G+PT K GE
Sbjct: 773 PEDIIVLGDFNLHHPLWSSTHRHGGRGPSAQGLLTVIEEFQLQLLTKPGTPTHRWKDGE- 831
Query: 428 ISAIDLSICTPQLASSLSWSTLCSTY--NSDHYPIIISFP*N 547
S IDL+ + LA ++ + +SDH PI + F N
Sbjct: 832 -STIDLTFASEDLADRVTHCKVDREVDCDSDHLPIALVFDWN 872
>UniRef50_Q2GYS3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1206
Score = 47.6 bits (108), Expect = 3e-04
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 17/165 (10%)
Frame = +2
Query: 95 LLIRNSSTFSSFPLPSHSNCFSVIAAIVDGICFVSIYVPHPSLQIFNEIKNLISVLPRPF 274
L +R+ P+PS + I + VS+YV S + + I L R F
Sbjct: 489 LWVRSDIEVEQIPVPSADLTAARIRLPDRAVLLVSVYVEGGSDEALEDAMREIDRLIRRF 548
Query: 275 ----------MILGDFNSHHTSWG----SSVSNSYGYELLDILDMYSLC-ILNSGSPTRL 409
++ GDFN H WG S G +++++D +SLC +L G T+
Sbjct: 549 RNGTGTRTDIILAGDFNRHDQLWGGDDVSPRRQGEGDRIINLMDEHSLCSLLPRG--TKT 606
Query: 410 TKPGEVISAIDLSICTPQLASSLSWSTL--CSTYNSDHYPIIISF 538
+ G++ S IDL + + +LA L T+ C + SDH I F
Sbjct: 607 WQSGDIESTIDLVLASAELADQLLRCTIHPCD-HGSDHRAIETDF 650
>UniRef50_Q868S0 Cluster: Reverse transcriptase; n=2; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1009
Score = 47.2 bits (107), Expect = 5e-04
Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Frame = +2
Query: 194 VSIYVPHP-SLQIFN-EIKNLISVLP--RPFMILGDFNSHHTSWGSSVSNS------YGY 343
VS+Y P S++ F + N + + F+I GDFN+ SW + + G
Sbjct: 84 VSVYAPPRFSMEEFQIMLDNTVMAVTGIHKFVIGGDFNAWSASWNNQLGERGETQKRRGE 143
Query: 344 ELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYP 523
+L +LN GS PG S +DL+ + +A S W L S NSDH
Sbjct: 144 LVLSTFAQIDAILLNDGSTPTYVGPGRT-SVVDLTFASRTVARSFKWEVLSSYMNSDHRA 202
Query: 524 III 532
I I
Sbjct: 203 IRI 205
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 46.4 bits (105), Expect = 8e-04
Identities = 45/181 (24%), Positives = 71/181 (39%), Gaps = 5/181 (2%)
Frame = +2
Query: 5 ETWLKPDFVF-KIPGYSCLREDRADGYGG-VCLLIRNSSTFSSFPLPSHSN--CFSVIAA 172
ET L+P KI G++ R DR G GG + + N S P N + A
Sbjct: 521 ETKLQPQTTDPKIRGFTLHRADRGIGPGGGTAIFVSNRIKHSVLATPDLRNMEAVGINVA 580
Query: 173 IVDGICFVSIYVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELL 352
+G + P + I E + P + GDFN+ H +WGS SN G L
Sbjct: 581 TANGPLRLFACYNRPQIPILEEDLQTLFDGNTPTIAAGDFNAKHINWGSRRSNRNGNFLN 640
Query: 353 DILDM-YSLCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPII 529
D + ++ PT +D++I + + T + +SDH P++
Sbjct: 641 GFTDQNLDISVMAPVEPTFYRNSDGAADILDVAI-VKNVVHQVR-LTAINDLSSDHNPVL 698
Query: 530 I 532
+
Sbjct: 699 M 699
>UniRef50_UPI0000D57891 Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2), partial; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to Hypothetical 115 kDa protein in
type I retrotransposable element R1DM (ORF 2), partial -
Tribolium castaneum
Length = 2033
Score = 46.0 bits (104), Expect = 0.001
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +2
Query: 269 PFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLS 448
P ++ GDFN+ T WG S+ G L D + + L +N + G S IDL+
Sbjct: 765 PVIVTGDFNAKSTEWGMPYSDRRGSLLADWIAQHDLTAVNKHDEYTFQR-GRAQSIIDLT 823
Query: 449 ICTPQLASSLS-WSTLCSTYNSDHYPIIISFP*N 547
+ L LS W TL + SDH I ++ N
Sbjct: 824 LVPTYLVHKLSNWRTLDAESLSDHKYIAFTWDDN 857
>UniRef50_O46184 Cluster: Reverse transcriptase; n=2; Drosophila
subobscura|Rep: Reverse transcriptase - Drosophila
subobscura (Fruit fly)
Length = 554
Score = 46.0 bits (104), Expect = 0.001
Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 9/159 (5%)
Frame = +2
Query: 68 RADGYGGVCLLIRNSSTFSSFPLPSHSNCFSVIAAI-VDG--ICFVSIYVPHPSLQIFNE 238
+ +G C+L R + F L + SN + A++ + G + VS Y+ H ++
Sbjct: 66 QTEGKIRTCILARKH--LNIFLLHNFSNGDNTAASLELQGTRLNLVSSYMAHEESDPPSD 123
Query: 239 -IKNLISVLPRP--FMILG-DFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGS-PT 403
++ ++S R +++G D N+HHT WGSS +N G L + +L I N G+ PT
Sbjct: 124 LVRKIVSDSERSDTSLLIGCDANAHHTQWGSSDTNVRGESLFSFILNSNLFIGNRGNDPT 183
Query: 404 RLTKPGEVISAIDLSICTPQLASSL-SWSTLCSTYNSDH 517
+ K + + IDL++ + +L ++ SW L SDH
Sbjct: 184 FIIKNRQEV--IDLTLLSHKLLDTIKSWRVLEDHSFSDH 220
>UniRef50_Q2HI82 Cluster: Putative uncharacterized protein; n=3;
Chaetomium globosum|Rep: Putative uncharacterized protein
- Chaetomium globosum (Soil fungus)
Length = 2049
Score = 46.0 bits (104), Expect = 0.001
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 17/165 (10%)
Frame = +2
Query: 95 LLIRNSSTFSSFPLPSHSNCFSVIAAIVDGICFVSIYVPHPSLQIFNEIKNLISVLPRPF 274
L +R+ P+PS + I + VS+YV S + + I L R F
Sbjct: 912 LWVRSDIEVEQIPVPSADLTAARIRLPDRAVLMVSVYVEGGSDEALEDAMREIDRLIRRF 971
Query: 275 ----------MILGDFNSHHTSWG----SSVSNSYGYELLDILDMYSLC-ILNSGSPTRL 409
++ GDFN H WG S G +++++D +SLC +L G T+
Sbjct: 972 RNGTGTRTDIILAGDFNRHDQLWGGDDVSPRRQGEGDRIINLMDEHSLCSLLPRG--TKT 1029
Query: 410 TKPGEVISAIDLSICTPQLASSLSWSTL--CSTYNSDHYPIIISF 538
+ G++ S IDL + + +LA L + C + SDH I +F
Sbjct: 1030 WQSGDIESTIDLVLASAELADQLLRCAIHPCD-HGSDHRAIETAF 1073
>UniRef50_Q9BLI0 Cluster: TRASSc3 protein; n=1; Samia cynthia|Rep:
TRASSc3 protein - Samia cynthia (Cynthia moth)
(Ailanthus silkmoth)
Length = 641
Score = 45.2 bits (102), Expect = 0.002
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +2
Query: 275 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGS-PT-RLTKPGEVI-SAIDL 445
+I GD N+ WGSS G LD L ILN G PT ++ + G + S +D+
Sbjct: 72 IIGGDVNAKSLWWGSSSEGHRGEAYRSFLDATGLQILNEGDLPTFQVVRGGRLFTSIVDV 131
Query: 446 SICTPQLASSL-SWSTLCSTYNSDHYPIIIS 535
++C+P L + W + +SDH I S
Sbjct: 132 TVCSPTLLGRIDDWKVDMNLTSSDHNSITFS 162
>UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase), partial; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to RNA-directed DNA polymerase from
mobile element jockey (Reverse transcriptase), partial -
Tribolium castaneum
Length = 830
Score = 44.8 bits (101), Expect = 0.002
Identities = 44/181 (24%), Positives = 71/181 (39%), Gaps = 5/181 (2%)
Frame = +2
Query: 5 ETWLKPDFVF-KIPGYSCLREDRADGYGG-VCLLIRNSSTFSSFPLPSHSN--CFSVIAA 172
ET L+P KI ++ R DR G GG + + N S P N + A
Sbjct: 164 ETKLQPQTTDPKIRDFTLHRADRGIGPGGGTAIFVSNRIKHSVLATPDLRNMEAVGINVA 223
Query: 173 IVDGICFVSIYVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELL 352
+G + P + I E + P + GDFN+ H +WGS SN G L
Sbjct: 224 TANGPLRLFACYNRPQIPILEEDLQTLFDGNTPTIAAGDFNAKHINWGSRRSNRNGNILN 283
Query: 353 DILDMY-SLCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPII 529
D + + ++ PT +D++I + + T + +SDH P++
Sbjct: 284 GFTDQHLDISVMAPVEPTFYRNSDGTADILDVAI-VKNVVHQVR-LTAINDLSSDHNPVL 341
Query: 530 I 532
+
Sbjct: 342 M 342
>UniRef50_A7T2B1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 445
Score = 44.8 bits (101), Expect = 0.002
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 7/154 (4%)
Frame = +2
Query: 35 KIPGYSCLREDRADGYGGVCLLIRNSSTF----SSFPLPSHSNCFSVIAAIVDGICFVSI 202
+IPGY +R+DR GGVCL +R+S + P + C + I
Sbjct: 174 RIPGYDIIRKDRNRNVGGVCLYLRSSINYCIRNDLVPDSVEAVCVEITKPHSRPFFVSII 233
Query: 203 YVPHPSLQIFNEIKNLISVLP---RPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYS 373
Y P + FN+++ LI + + ++LGD N + N L I + Y
Sbjct: 234 YRPESPIDYFNDLEQLIKAVDDVNKEHVMLGDLNCCLVK--RPIENK-TKRLKKIYETYQ 290
Query: 374 LCILNSGSPTRLTKPGEVISAIDLSICTPQLASS 475
L L PTR+T + + ++ C ++ SS
Sbjct: 291 LSQL-LNEPTRITMHSKSLIDHFVTSCPKKINSS 323
>UniRef50_Q2GN74 Cluster: Putative uncharacterized protein; n=3;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1481
Score = 44.4 bits (100), Expect = 0.003
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Frame = +2
Query: 275 MILGDFNSHHTSWG----SSVSNSYGYELLDILDMYSLC-ILNSGSPTRLTKPGEVISAI 439
++ GDFN H WG S G +++++D +SLC +L G T+ + G++ S I
Sbjct: 516 ILAGDFNRHDQLWGGDDVSPRRQGEGDRIINLMDEHSLCSLLPRG--TKTWQSGDIESTI 573
Query: 440 DLSICTPQLASSLSWSTL--CSTYNSDHYPIIISF 538
DL + + +LA L T+ C + SDH I +F
Sbjct: 574 DLVLASAELADQLLRCTIHPCD-HGSDHRAIETAF 607
>UniRef50_Q2GMV1 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1372
Score = 44.4 bits (100), Expect = 0.003
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Frame = +2
Query: 275 MILGDFNSHHTSWG----SSVSNSYGYELLDILDMYSLC-ILNSGSPTRLTKPGEVISAI 439
++ GDFN H WG S G +++++D +SLC +L G T+ + G++ S I
Sbjct: 522 ILAGDFNRHDQLWGGDDVSPRRQGEGDRIINLMDEHSLCSLLPRG--TKTWQSGDIESTI 579
Query: 440 DLSICTPQLASSLSWSTL--CSTYNSDHYPIIISF 538
DL + + +LA L T+ C + SDH I +F
Sbjct: 580 DLVLASAELADQLLRCTIHPCD-HGSDHRAIETAF 613
>UniRef50_UPI00015B4772 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 751
Score = 43.6 bits (98), Expect = 0.006
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
Frame = +2
Query: 5 ETWLKPDFVFKIPGYSCLREDRADGY-GGVCLLIRNSSTFSSF-PLPSHSNCFSV----I 166
E+WLKP FKI G++ R+DR D GG+ LIR FS P+H + +
Sbjct: 39 ESWLKPKDNFKIAGFNTYRKDREDTQGGGILYLIRKDIKFSVIVQFPTHVPDIEMGGIRL 98
Query: 167 AAIVDGICFVSIY-VPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNS 334
+ ++ Y +P +L+ S +++GDFN+H+ W ++S
Sbjct: 99 TNFEPSLDLLACYKIPGSTLEQHEWNAITGSTDNNNTILMGDFNAHNQLWNCRHTDS 155
>UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx
mori|Rep: Reverse transcriptase - Bombyx mori (Silk
moth)
Length = 1076
Score = 43.6 bits (98), Expect = 0.006
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 9/128 (7%)
Frame = +2
Query: 161 VIAAIVDGICFVSIYV-PHPSLQIFNEIKNLISVL-----PRPFMILGDFNSHHTSWGSS 322
++A ++ I + +Y P+ F + + V+ PR ++ GDFN+ +WGS
Sbjct: 79 IVAVQLENIVVIGVYFSPNRPTVEFERFLDGLEVIARHLAPRSVILAGDFNAKSVAWGSP 138
Query: 323 VSNSYGYELLDILDMYSLCILNSGS-PTRLTKPGEVISAIDLSICTPQLASS-LSWSTLC 496
+++ G L + LCI+N GS T + GE S +DL+ + +A L W +
Sbjct: 139 FTDARGRLLEEWAVAVGLCIVNRGSIATCVRWTGE--SIVDLTFASSPVARRILGWRVVV 196
Query: 497 STYN-SDH 517
+ SDH
Sbjct: 197 GAESLSDH 204
>UniRef50_UPI00015B4820 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 1050
Score = 37.9 bits (84), Expect(2) = 0.008
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 11/121 (9%)
Frame = +2
Query: 5 ETWLKPDFV----FKIPGYSCLREDRADGYGG-VCLLIRNSSTFSSFPLPSHSNCFSV-- 163
E+WL F+ G+ R+DR D GG + + IRN+ F + +
Sbjct: 327 ESWLPNKFLQDGQLHFSGFKTFRKDRQDSRGGGILIFIRNNLAFIELKNITEKSVELAGL 386
Query: 164 -IAAIVDGICFVSIYVPH---PSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSN 331
I + + + Y P S I++EI N + + + +GDFNSHH SW ++
Sbjct: 387 KINNVKPHLELIVCYRPPGLTSSQSIWDEIFNNVDKT-KFTIFMGDFNSHHESWNCRKND 445
Query: 332 S 334
S
Sbjct: 446 S 446
Score = 24.2 bits (50), Expect(2) = 0.008
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 440 DLSICTPQLASSLSWSTLCSTYNSDHYPIII 532
DL + L+ ++ T+ SDHYPI +
Sbjct: 448 DLIFSSINLSDKINVKVNDDTWGSDHYPIFV 478
>UniRef50_UPI00015B43B0 Cluster: PREDICTED: similar to reverse
transcriptase homolog, partial; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to reverse
transcriptase homolog, partial - Nasonia vitripennis
Length = 1316
Score = 42.7 bits (96), Expect = 0.010
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 18/203 (8%)
Frame = +2
Query: 23 DFVFKIPGYSCLREDRADGY--GGVCLLIRNSSTFSSFPL---PSHSNCFSVIAAI--VD 181
+ + + Y+ +R DR D GG +LIR + P H+N S I D
Sbjct: 328 EMISMLTDYNIIRTDRPDYIQGGGTGILIRKYIDYKVVHFTNTPHHNNLESTAIKIQCTD 387
Query: 182 G--ICFVSIYVP----HPSLQIFNEI--KNLISVLPRPFMILGDFNSHHTSWGSSVSNSY 337
+ +S+Y H + N + +N I F++ GD N+ WG S++ S
Sbjct: 388 NTQLMIISVYAAGHNQHGFIDELNHLFTQNNIQTNNTYFLLAGDINARVRHWGDSITKSR 447
Query: 338 GYELLDILDMYSLCI-LNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCST--YN 508
G L + L+ S+ + LN P P S +D+ I ++ S +T C Y+
Sbjct: 448 GGYLTNWLNSNSIDLRLNIYPPAEPNFPSS-NSYLDVCIADARINIVNSANTKCQVLDYD 506
Query: 509 SDHYPIIISFP*NTCYCHMAKYQ 577
SDH I + + H+ Q
Sbjct: 507 SDHRAIYMLIDLRSTNLHLHTVQ 529
>UniRef50_Q86GH0 Cluster: Pol protein; n=1; Drosophila
americana|Rep: Pol protein - Drosophila americana (Fruit
fly)
Length = 1517
Score = 42.7 bits (96), Expect = 0.010
Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 11/173 (6%)
Frame = +2
Query: 47 YSCLREDRADGYGGVCLLIRNSSTFSSFPLPSHSNCFSVIAAIV----DGICFVSIYVPH 214
Y R+ +GGV +LIR+ + C AI + I IY P
Sbjct: 126 YVATRKAPNQRFGGVAILIRHGIKHIALEPIMQDACQCAPVAITLSTQETILVAPIYCP- 184
Query: 215 PSLQIFNE-----IKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELL-DILDMYSL 376
P + +E + ++ S+ P+ F+I GD+N+ T WG+ G ELL I
Sbjct: 185 PQYKWTSENFGKLLSHIDSLSPQGFIICGDWNAKSTWWGNMRHCQRGRELLRTIHSNKKY 244
Query: 377 CILNSGSPTRLT-KPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPIII 532
IL +G T G SAID +I L ++ + NSDH PI+I
Sbjct: 245 NILATGGTTHYPYARGNQPSAIDFAIYGGIGDRRLRTYSI-NDLNSDHLPILI 296
>UniRef50_A7REU6 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 442
Score = 42.7 bits (96), Expect = 0.010
Identities = 40/137 (29%), Positives = 58/137 (42%), Gaps = 11/137 (8%)
Frame = +2
Query: 38 IPGYSCLREDRADGYGGVCLLIRNSSTF----SSFPLPSHSNCFSVIAAIVDGICFVSIY 205
IPG+ +R+DR GGVCL +R+S + P + C +I ++Y
Sbjct: 206 IPGFDIIRKDRKRNGGGVCLYVRDSHNYRIRNDLVPEDLEAVCVEIIKPNSKPFIVCTVY 265
Query: 206 VPH--PSLQIFNEIKNLISVLPR---PFMILGDFNSHHTSWGSSVSNSYGYELLDILDMY 370
P S + F +NLI L F +LGD N G+ +S YE +Y
Sbjct: 266 RPFIISSREFFVSFENLIKNLDNLAIEFHLLGDLN------GNMLSEVPTYEAKIFKRIY 319
Query: 371 SLCILNS--GSPTRLTK 415
L+ PTR+TK
Sbjct: 320 QTYQLSQLITKPTRITK 336
>UniRef50_UPI0000E4771B Cluster: PREDICTED: similar to
ependymin-related protein precursor; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
ependymin-related protein precursor - Strongylocentrotus
purpuratus
Length = 605
Score = 42.3 bits (95), Expect = 0.013
Identities = 36/107 (33%), Positives = 50/107 (46%)
Frame = +2
Query: 35 KIPGYSCLREDRADGYGGVCLLIRNSSTFSSFPLPSHSNCFSVIAAIVDGICFVSIYVPH 214
+I G + + E D YG + + RN L S SN V+ + GI S+Y
Sbjct: 94 RISGMTLIAERPHDQYG-IAIFARNGLDVDKSYL-SDSNNIEVLFIGLMGITMSSLY--R 149
Query: 215 PSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLD 355
P L+ F+ R M++GDFNSH T+WG N G EL+D
Sbjct: 150 PPLEPFDLPGRATD--GRINMVIGDFNSHSTTWGYREMNEDG-ELVD 193
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse
transcriptase-like protein; n=9; cellular organisms|Rep:
Endonuclease and reverse transcriptase-like protein -
Bombyx mori (Silk moth)
Length = 960
Score = 42.3 bits (95), Expect = 0.013
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 8/184 (4%)
Frame = +2
Query: 5 ETWLKPDFVF-KIPGYSCLREDRADGYGGVCLLIRNSSTFSSFPL--PSHSNCFSVIAAI 175
ET LKP KI Y+ +R DR GG ++ + PL P+ N + + I
Sbjct: 45 ETLLKPARRDPKIANYNMVRNDRRTARGGGTVIYYRRA-LHCIPLDPPALVNIEASVCRI 103
Query: 176 -VDG---ICFVSIYVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGY 343
+ G I S+Y+P + + ++I+ L+S + ++ GD N H W S + G
Sbjct: 104 SLTGHAPIVIASVYLPPEKIVLSSDIEALLS-MGSSVILAGDLNCKHIRWNSHTTTPNGR 162
Query: 344 ELLDILDMYSLCILNSGSPTRL-TKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHY 520
L ++D + I+ +PT +D+++ + L + S +SDH
Sbjct: 163 RLDALVDDLAFDIIAPLTPTHYPLNIAHRPDILDIAL-LKNVTLRLHSIEVVSELDSDHR 221
Query: 521 PIII 532
P+++
Sbjct: 222 PVVM 225
>UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TRAS3
protein - Bombyx mori (Silk moth)
Length = 1682
Score = 40.3 bits (90), Expect = 0.052
Identities = 40/141 (28%), Positives = 60/141 (42%), Gaps = 7/141 (4%)
Frame = +2
Query: 134 LPSHSNCFSVIAAIVDGICFVSIYVP--HPSLQIFNEIKNLISVLPRPFMILG-DFNSHH 304
L +++ C I I VS Y HP + + + R +I G D N+
Sbjct: 547 LTTNNICVVGINTSAWSITLVSFYFEPDHPIEPYLEHLGKIKEEIGRSKIIYGGDSNAKS 606
Query: 305 TSWGSSVSNSYGYELLDILDMYSLCILNSGS-PTRLTKPG--EVISAIDLSICTPQLASS 475
T WGS ++ G +L L+ L ILN+G PT T G S +D++ C+ L
Sbjct: 607 TWWGSPSIDNRGTSMLGTLEELELNILNTGEIPTFDTIRGGKRYKSYVDVTACSTDLMDL 666
Query: 476 LS-WSTLCSTYNSDHYPIIIS 535
+S W SDH I+ +
Sbjct: 667 VSDWRVDEGLTTSDHNAILFN 687
>UniRef50_A7TCP1 Cluster: Predicted protein; n=4; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 412
Score = 39.9 bits (89), Expect = 0.069
Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 7/137 (5%)
Frame = +2
Query: 23 DFVFKIPGYSCLREDRADGYGGVCLLIRNS----STFSSFPLPSHSNCFSVIAAIVDGIC 190
D KI GY R+DR GGVC+ IR+S + P + C +
Sbjct: 236 DAELKIHGYDISRKDRNRDGGGVCVYIRSSINCVNRKEIVPEDVEAVCLEIRKPNSRPFI 295
Query: 191 FVSIYVPHPSLQIFNEIKNLISVL---PRPFMILGDFNSHHTSWGSSVSNSYGYELLDIL 361
+Y P ++ FN + LI + + +ILGD N V ++ +L I
Sbjct: 296 VSVVYRPESPIEYFNRFEELIKAVDDEDKEHVILGDLNC--CLLKKKVFDNKTKKLKSIY 353
Query: 362 DMYSLCILNSGSPTRLT 412
+ Y L L PTR+T
Sbjct: 354 EAYQLSQL-INEPTRIT 369
>UniRef50_UPI0000D578E5 Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2); n=6; Tribolium castaneum|Rep: PREDICTED:
similar to Hypothetical 115 kDa protein in type I
retrotransposable element R1DM (ORF 2) - Tribolium
castaneum
Length = 1057
Score = 39.5 bits (88), Expect = 0.092
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +2
Query: 194 VSIYVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYS 373
V+I V + ++++ + ++ S +P ++ GDFN+ WG + G L + L +
Sbjct: 22 VAIAVMNKKIKVYARVGSIGSHGGKPCVVTGDFNAKSPEWGGETQDERGRLLSEWLATLN 81
Query: 374 LCILNSGSPTRLTKPGEVISAIDLSICTPQLASSL-SWSTLCSTYNSDH 517
+ N G K G S ID++ T A + +W+ SDH
Sbjct: 82 CVVYNDGMKPTFLK-GRYQSWIDVTFSTENAARWVRNWTVEEEETLSDH 129
>UniRef50_UPI0000D578E3 Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2); n=2; Tribolium castaneum|Rep: PREDICTED:
similar to Hypothetical 115 kDa protein in type I
retrotransposable element R1DM (ORF 2) - Tribolium
castaneum
Length = 1208
Score = 39.5 bits (88), Expect = 0.092
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = +2
Query: 275 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLT-KPGEVISAIDLSI 451
+I GDFN+ T+WG +++ G L D + L + P T + G S IDL++
Sbjct: 100 IITGDFNAKSTAWGMPQTDARGSILNDWI--AELNFITKNKPNYYTFERGTSKSIIDLTL 157
Query: 452 CTPQLASSL-SWSTLCSTYNSDHYPIIISF 538
+ +A+++ W+T+ + SDH IISF
Sbjct: 158 VSQNVANNIQGWTTMDTESLSDHK--IISF 185
>UniRef50_Q868R8 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 988
Score = 39.1 bits (87), Expect = 0.12
Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 13/128 (10%)
Frame = +2
Query: 182 GICFVSIYVPHPSLQI-FNEIKN----LISVLPR--PFMILGDFNSHHTSWG------SS 322
GI F S+Y+P + E K ++S+LPR +I G N +WG
Sbjct: 82 GIVFCSVYLPPVGSDLTVEEYKRKWTEIVSMLPRNRDTVIGGYVNVWSGAWGMERRPNDG 141
Query: 323 VSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCST 502
S G ++D L +LN G+ + S +D+S C+P L +W +C
Sbjct: 142 ERVSRGGVVMDAAAALGLVLLNQGNQSTWIGANGRNSIVDVSFCSPSLVGDNNW-RVCDE 200
Query: 503 YNSDHYPI 526
SDH I
Sbjct: 201 TPSDHNTI 208
>UniRef50_Q6J4U7 Cluster: Pol protein; n=9; cellular organisms|Rep:
Pol protein - Drosophila melanogaster (Fruit fly)
Length = 1092
Score = 38.7 bits (86), Expect = 0.16
Identities = 48/184 (26%), Positives = 75/184 (40%), Gaps = 18/184 (9%)
Frame = +2
Query: 35 KIPGY-SCLREDRADGYGGVCLLIRNSSTFSSFPLPSHSNCFSVIAAIV--------DGI 187
++PGY + L ++ A G I NSS P C ++ + I
Sbjct: 66 ELPGYFTYLAQNPASSKRGGVATIVNSSLRHMALEPIEKECIQSAPIVLLPENNRRSEMI 125
Query: 188 CFVSIYVPHPSLQI----FNEIKNLISVL---PRPFMILGDFNSHHTSWGSSVSNSYGYE 346
S+Y P PSL F ++ N ++ GD+N+ H WG + G
Sbjct: 126 VIASVYCP-PSLSWSPHHFTDVLNFAEKTMGGQTKLILCGDWNAKHRQWGCIRACQRGAA 184
Query: 347 LLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHY 520
L D + S+ I+ +GS T + SAID SIC +L + + +SDH
Sbjct: 185 LYDAIQADSMAEIVATGSATHFPHDTRKSPSAIDFSIC-KRLGRYEKRISSSAHLSSDHL 243
Query: 521 PIII 532
PI++
Sbjct: 244 PILL 247
>UniRef50_A7SZ72 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 162
Score = 38.7 bits (86), Expect = 0.16
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +2
Query: 2 SETWLKP---DFVFKIPGYSCLREDRAD-GYGGVCLLIRNSSTFSSFPLPSHSNC 154
SETWLK D V IPGY+ +R+DR +GGVC IR + + S NC
Sbjct: 19 SETWLKDVVSDGVVHIPGYAVVRKDRKTIDHGGVCAYIRQE--YCKYKHLSDLNC 71
>UniRef50_Q2H8L4 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 862
Score = 38.3 bits (85), Expect = 0.21
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 15/132 (11%)
Frame = +2
Query: 95 LLIRNSSTFSSFPLPSHSNCFSVIAAIVDGICFVSIYVPHPSLQIFNEIKNLISVLPRPF 274
L +R+ P+PS + I + VS+YV S + + I L R F
Sbjct: 278 LWVRSDIEVEQIPVPSADLTAARIRLPDRAVLMVSVYVEGGSDEALEDAMREIDRLIRRF 337
Query: 275 ----------MILGDFNSHHTSWG----SSVSNSYGYELLDILDMYSLC-ILNSGSPTRL 409
++ GDFN H WG S G +++++D +SLC +L G T+
Sbjct: 338 RNGTGTRTDIILAGDFNRHDQLWGGDDVSPRRQGEGDRIINLMDEHSLCSLLPRG--TKT 395
Query: 410 TKPGEVISAIDL 445
+ G++ S IDL
Sbjct: 396 WQSGDIESTIDL 407
>UniRef50_Q23PW5 Cluster: Endonuclease/Exonuclease/phosphatase
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Endonuclease/Exonuclease/phosphatase family protein -
Tetrahymena thermophila SB210
Length = 345
Score = 37.5 bits (83), Expect = 0.37
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Frame = +2
Query: 2 SETWLKPDFVFKIPGYSCLREDRADGYGGVCLLIR-NSSTFSSFPLPSHSN-CFSVIAAI 175
+ETWLK + F P Y + D + G +L+R NSS + S SHSN + I
Sbjct: 59 NETWLKSEETFDDPNYLEIATDFNQKHQGTAILLRINSSKYYSCYQVSHSNKNLTEIVLR 118
Query: 176 VD---GICFVSIYVP 211
+D I F+S+Y P
Sbjct: 119 LDPENKIHFISVYAP 133
>UniRef50_A7RXT7 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 463
Score = 37.5 bits (83), Expect = 0.37
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Frame = +2
Query: 2 SETWLKP---DFVFKIPGYSCLREDRA---DGYGGVCLLIRNSSTF 121
SETWL D +PG+ C R DR+ +GYGGV +R+ F
Sbjct: 340 SETWLDSQTADAEINLPGFVCARRDRSGTKEGYGGVATFVRDDLAF 385
>UniRef50_A7RPI3 Cluster: Predicted protein; n=14; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 579
Score = 37.5 bits (83), Expect = 0.37
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Frame = +2
Query: 2 SETWLKP---DFVFKIPGYSCLREDRA---DGYGGVCLLIRNSSTF 121
SETWL D +PG+ C R DR+ +GYGGV +R+ F
Sbjct: 402 SETWLDSQTADAEINLPGFVCARRDRSGTKEGYGGVATFVRDDLAF 447
>UniRef50_Q2GU99 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1393
Score = 37.5 bits (83), Expect = 0.37
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Frame = +2
Query: 98 LIRNSSTFSSFPLPSHSNCFSVIAAIVDGICFVSIYVPHPSLQIFNEIKNLISVLPRPF- 274
++ N P+PS + I + VS+YV S + + I L R F
Sbjct: 357 VVLNDMEVEQIPVPSADLTAARIRLPDRAVLMVSVYVEGGSDEALEDAMREIDRLIRRFR 416
Query: 275 ---------MILGDFNSHHTSWG----SSVSNSYGYELLDILDMYSLC-ILNSGSPTRLT 412
++ GDFN H WG S G +++++D +SLC +L G T+
Sbjct: 417 NGTGTRTDIILAGDFNRHDQLWGGDDVSPRRQGEGDRIINLMDEHSLCSLLPRG--TKTW 474
Query: 413 KPGEVISAIDL 445
+ G++ S IDL
Sbjct: 475 QSGDIESTIDL 485
>UniRef50_UPI00015B4782 Cluster: PREDICTED: similar to Lian-Aa1
retrotransposon protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Lian-Aa1 retrotransposon protein -
Nasonia vitripennis
Length = 832
Score = 37.1 bits (82), Expect = 0.49
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Frame = +2
Query: 275 MILGDF-NSHHTSWGSSVSNSYGYELLDILDMYSLCILNSG------SPTRLTKPGE 424
+ILG + N+HH WG+S +NS LL +LCILN G + R T PG+
Sbjct: 86 LILGCYANAHHIVWGTSDNNSGDDALLQYFVTTNLCILNRGRESTFYNSVRRTDPGQ 142
>UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster
subgroup|Rep: Pol protein - Drosophila melanogaster
(Fruit fly)
Length = 1103
Score = 37.1 bits (82), Expect = 0.49
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Frame = +2
Query: 224 QIFNEIKNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYEL-LDILDMYSLCILNSGSP 400
++FN + L+ + F++ GD+N H WG+ +S + G L IL L I+ +G
Sbjct: 137 KLFNHFEMLLDGKSK-FILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHA 195
Query: 401 TRLT-KPGEVISAIDLSICTPQLASSL-SWSTLCSTYNSDHYPIII 532
T + SA+D +IC L ++ST +SDH PI I
Sbjct: 196 THFPFDKKKQPSALDFAICKGFHTQKLKTYST--DELSSDHLPIQI 239
>UniRef50_A7RML8 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 297
Score = 37.1 bits (82), Expect = 0.49
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
Frame = +2
Query: 2 SETWLKPDF---VFKIPGYSCLREDRA-DGYGGVCLLIRNS 112
+ETWL+ V + GY+ +R DR D +GGVC+LI++S
Sbjct: 224 TETWLRNHIHNNVIAVSGYNLVRRDRTKDQHGGVCILIKDS 264
Score = 35.5 bits (78), Expect = 1.5
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Frame = +2
Query: 2 SETWLKPDF---VFKIPGYSCLREDRA-DGYGGVCLLIRNS 112
+ETWL+ V + GY+ +R DR D +GGVC+ I++S
Sbjct: 118 TETWLRNHIHNNVIAVSGYNLVRRDRTKDQHGGVCIFIKDS 158
>UniRef50_UPI00015B48A6 Cluster: PREDICTED: similar to ORF2-encoded
protein; n=5; Nasonia vitripennis|Rep: PREDICTED:
similar to ORF2-encoded protein - Nasonia vitripennis
Length = 1146
Score = 36.3 bits (80), Expect = 0.85
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +2
Query: 2 SETWLKP---DFVFKIPGYSCLREDRADGYGGVCLLIRN 109
+ETWL P D + I G+S +R+DR GGV L +RN
Sbjct: 439 AETWLGPIVDDSLVSIGGFSIIRQDRNVNGGGVALFVRN 477
>UniRef50_A7ERU2 Cluster: Putative uncharacterized protein; n=12;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1660
Score = 36.3 bits (80), Expect = 0.85
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +2
Query: 275 MILGDFNSHHTSWGSSVSNSYGYELL-DILDMYSLCILNS-GSPTRLTKPGEVISAIDLS 448
+++GDFNSHH W + S +LL + + ++L + N G+ T S +DL+
Sbjct: 497 ILVGDFNSHHPWWDPFSNKSSNADLLTEWFEDHNLILFNEPGTSTFYRTNMTNPSVLDLT 556
Query: 449 ICTPQLASSLS-WSTLCSTYNSDHYPII 529
+ T ++ ++ W L SDH I+
Sbjct: 557 LATDSVSPYITDWQVL-PDLGSDHLSIL 583
>UniRef50_A6R5U3 Cluster: Predicted protein; n=10; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1390
Score = 36.3 bits (80), Expect = 0.85
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +2
Query: 275 MILGDFNSHHTSWGS-SVSNSY--GYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDL 445
+ILGD N HH WG V ++ ++L+ +D L + T G + IDL
Sbjct: 422 VILGDLNVHHERWGGVRVERNFRMAWQLIAQVDRLGLQLATPVGATTWQDRGSPGTTIDL 481
Query: 446 SICTPQLASSLSWSTLC--STYNSDHYPI 526
+ +P L L + + SDH PI
Sbjct: 482 TFLSPLLHDKLRRCAIAEEACKGSDHKPI 510
>UniRef50_A6R0B1 Cluster: Predicted protein; n=9; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1672
Score = 36.3 bits (80), Expect = 0.85
Identities = 39/128 (30%), Positives = 50/128 (39%), Gaps = 14/128 (10%)
Frame = +2
Query: 185 ICFVSIYVP------HPSLQIFNEIKNLISVLPRPFMIL-GDFNSHHTSWGSSVSNSYGY 343
I S Y+P +P Q NEI I + P +I+ GDFN HH WG N
Sbjct: 499 ILIFSTYIPPFDPADNPIHQTLNEISRTIRLSPATTLIIAGDFNRHHQMWGGIQVNRRRA 558
Query: 344 E----LLDILDMYSL-CILNSGSPT--RLTKPGEVISAIDLSICTPQLASSLSWSTLCST 502
LLD + L L G+ T + PG S +DL++ L
Sbjct: 559 RDTGGLLDFIQAQELHSCLPPGTATFWSASHPG-TYSTLDLTLSNVP-HQLLKCHPYRDN 616
Query: 503 YNSDHYPI 526
Y SDH I
Sbjct: 617 YGSDHLAI 624
>UniRef50_UPI0000E4A69A Cluster: PREDICTED: similar to reverse
transcriptase-like protein; n=4; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to reverse
transcriptase-like protein - Strongylocentrotus
purpuratus
Length = 2519
Score = 35.9 bits (79), Expect = 1.1
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 19/119 (15%)
Frame = +2
Query: 2 SETWLKPDFVFKI-----PGYSCLREDRA--DGYGGVCLLIRNSSTFSSFPLPSHSNCFS 160
+ETWLK + I GY+ + R D +GG+ ++ R S + S + +
Sbjct: 137 TETWLKSEDPVVIGEGTPSGYTFINAPRGREDAHGGIAVIYRTGLNLSIINVESTHDSYE 196
Query: 161 VIAAIVDG--ICFVSIYVPHPS----------LQIFNEIKNLISVLPRPFMILGDFNSH 301
+ +C+V IY P PS L F+E+ ++ ++LGDFN H
Sbjct: 197 RVCVTDPARMVCYVVIYRPPPSTRNGLKTSDFLADFDELIRELTTRSFKVLLLGDFNIH 255
>UniRef50_Q2HX35 Cluster: LINE-type retrotransposon LIb DNA,
complete sequence, Insertion at the S11 site; n=7;
Ipomoea|Rep: LINE-type retrotransposon LIb DNA, complete
sequence, Insertion at the S11 site - Ipomoea batatas
(Sweet potato) (Batate)
Length = 1898
Score = 35.9 bits (79), Expect = 1.1
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Frame = +2
Query: 83 GGVCLLIRNSSTFSSFPLPSHSNCFSVIAAIVDGICFVSIYVPHPSL----QIFNEIKNL 250
GG+ LL + + S + +S +A+ G CF++ P+ + K L
Sbjct: 599 GGLLLLWKPALNLSV--ISHNSQAIHTLASHRLGNCFITFAYIRPNTFAKCGFWEYCKQL 656
Query: 251 ISVLPRPFMILGDFNSHHTS---WGSSVSNSYGYELLDILDMYSLC-ILNSGS 397
+ + P+M++GD N TS WGSS N L + +D YS C +L+ GS
Sbjct: 657 ANSIQSPWMVVGDLNDIATSDEQWGSSSLNY--TSLQNFVDAYSDCGLLDPGS 707
>UniRef50_Q6UV17 Cluster: Endonuclease and reverse
transcriptase-like protein; n=25; Arthropoda|Rep:
Endonuclease and reverse transcriptase-like protein -
Bombyx mori (Silk moth)
Length = 986
Score = 35.5 bits (78), Expect = 1.5
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 275 MILGDFNSHHTSW-GSSVSNSYGYELLDILDMYSLCILNSGSPTR-LTKPGEVISAIDLS 448
++LGDFN+HH W GS ++ G D Y L L + PTR L G S +DL
Sbjct: 153 VVLGDFNAHHQEWLGSRTTDLPGRTAYDFALAYGLSQLVT-QPTRVLDIEGHEPSLLDLL 211
Query: 449 ICT 457
+ T
Sbjct: 212 LTT 214
>UniRef50_A7SP32 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 211
Score = 35.5 bits (78), Expect = 1.5
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Frame = +2
Query: 2 SETWLKPDF---VFKIPGYSCLREDRA-DGYGGVCLLIRNS 112
+ETWL+ V + GY+ +R DR D +GGVC+ I++S
Sbjct: 30 TETWLRNHIHNNVIAVSGYNLVRRDRTKDQHGGVCIFIKDS 70
>UniRef50_A7S0T7 Cluster: Predicted protein; n=4; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 636
Score = 35.5 bits (78), Expect = 1.5
Identities = 50/179 (27%), Positives = 72/179 (40%), Gaps = 22/179 (12%)
Frame = +2
Query: 2 SETWLKPDF----VFKIPGYSCLREDRADGYGGVCLLIRNSSTFSSF----PLPSHSNCF 157
+ETWL VF GY+ R DR D GG L+ S +F + P +
Sbjct: 268 NETWLNSSISDEEVFH-SGYTIYRRDRNDREGGGVLIAAKSDSFKAIKEWKPDMTLFQDL 326
Query: 158 SVIAAIVDGIC-----FVSIYVPHPS------LQIFNEIKNLISVLPRPFMILGDFNSHH 304
V++A + C F S Y P P L+ FN + +I GDFN
Sbjct: 327 EVVSAELTTSCNRKVLFSSFYWPDPDSDPYVWLEKFNNYLDYACDSFDTMLISGDFNMSK 386
Query: 305 TSWGSSVSNSYGYE--LLDILDMYSLCILNSGSPTRLTKPGE-VISAIDLSICTPQLAS 472
SW S + E +IL+ + L +N PTR K + VI+ +C ++ S
Sbjct: 387 ISWASEEQSLGARERSFTEILNDHYLSQMNH-FPTRGDKILDLVITNASDQVCVNEVLS 444
>UniRef50_A7EVG0 Cluster: Reverse transcriptase; n=8; Sclerotinia
sclerotiorum 1980|Rep: Reverse transcriptase -
Sclerotinia sclerotiorum 1980
Length = 1708
Score = 35.1 bits (77), Expect = 2.0
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +2
Query: 275 MILGDFNSHHTSWGS-SVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEV-ISAIDLS 448
++LGDFN+HH W S + +L + + +L +LN + + + S +DL
Sbjct: 576 ILLGDFNAHHLWWDPFSKKSGNADQLAEWFEDQNLILLNEPGISTFYRTNLLNPSVLDLI 635
Query: 449 ICTPQLASSL-SWSTLCSTYNSDHYPII 529
+ + ++ + +W TL T SDH I+
Sbjct: 636 LASEGISPQIHNWQTLSDT-GSDHAGIL 662
>UniRef50_A6RFJ6 Cluster: Predicted protein; n=6; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1163
Score = 35.1 bits (77), Expect = 2.0
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +2
Query: 275 MILGDFNSHHTSWGS-SVSNSY--GYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDL 445
+ILGD N HH WG V ++ ++L+ +D L + T G + IDL
Sbjct: 422 VILGDLNVHHERWGGVRVERNFRMAWQLIAQVDRLGLQLATPVGATTWQDRGSPGTTIDL 481
Query: 446 SICTPQLASSLSWSTLC--STYNSDHYPI 526
+ +P L L + + SDH P+
Sbjct: 482 TFLSPLLHDKLRRCAIAEEACKGSDHKPM 510
>UniRef50_A6RCU0 Cluster: Predicted protein; n=8; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1838
Score = 35.1 bits (77), Expect = 2.0
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Frame = +2
Query: 275 MILGDFNSHHTSWGSSVS--NSYGYELLDIL-DMYSLCILNSGSPTRLTKPGEVISAIDL 445
+++GDFN HH WG + S ++ EL+ ++ D ++ G+ T + + IDL
Sbjct: 698 IVVGDFNLHHPLWGGTGSDRDAEAEELVTLMADQQLELLIPQGTVTYDEHNRQ--TTIDL 755
Query: 446 SICTPQLASSLSWSTLCS--TYNSDHYPIIIS 535
++ TP + ++ L + SDH PI I+
Sbjct: 756 ALGTPWIHERKAYCGLREDLDHQSDHQPIAIT 787
>UniRef50_A6R9N6 Cluster: Predicted protein; n=24; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1553
Score = 35.1 bits (77), Expect = 2.0
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +2
Query: 275 MILGDFNSHHTSWGS-SVSNSY--GYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDL 445
+ILGD N HH WG V ++ ++L+ +D L + T G + IDL
Sbjct: 723 VILGDLNVHHERWGGVRVERNFRMAWQLIAQVDRLGLQLATPVGATTWQDRGSPGTTIDL 782
Query: 446 SICTPQLASSLSWSTLC--STYNSDHYPI 526
+ +P L L + + SDH P+
Sbjct: 783 TFLSPLLHDKLRRCAIAEEACKGSDHKPM 811
>UniRef50_Q2HUN6 Cluster: RNA-directed DNA polymerase (Reverse
transcriptase); Ribonuclease H; n=3; Medicago
truncatula|Rep: RNA-directed DNA polymerase (Reverse
transcriptase); Ribonuclease H - Medicago truncatula
(Barrel medic)
Length = 1296
Score = 34.7 bits (76), Expect = 2.6
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Frame = +2
Query: 44 GYSCLREDRADGY-GGVCLLIRNSSTFSSFPLPSHSNCFSVI----AAIVDGICFVSI-- 202
GY+ + A+G+ GGV LL +++ +S L + + I AAI C +
Sbjct: 51 GYTPVHIIEANGHSGGVWLLKHSTTNITSTVLDFNQYSITFIIGRGAAITTCTCIYASPN 110
Query: 203 YVPHPSLQIFNEIKNLISVLPRPFMILGDFNSHH 304
Y P+L +N + N+ + P+M++GDFN H
Sbjct: 111 YSMRPNL--WNYLVNINDTITGPWMLIGDFNETH 142
>UniRef50_A7T299 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1047
Score = 34.7 bits (76), Expect = 2.6
Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 14/152 (9%)
Frame = +2
Query: 20 PDFVFKIPGYSCLREDRADGYGGVCLLIRNSSTFSSFPLPSHSNCFSVIAAIV----DGI 187
PD F + GYS R DR G GG+ LI + + + +A + +
Sbjct: 514 PDSQFSMAGYSLYRNDRKKGGGGIMALISTALVKKRLKINKNYKTVETLAFEIKTNKGNM 573
Query: 188 CFVSIYVP------HPSLQIFNEIK---NLISVLPRPFMILGDFNSHHTSWGSSVSNSYG 340
+ IY P + L++ NE+ N S+ ++LGD N G
Sbjct: 574 VILGIYRPPTLLCGNYRLELENELSELCNWASLQANFVVVLGDLNLDRL----KPEKPEG 629
Query: 341 YELLDI-LDMYSLCILNSGSPTRLTKPGEVIS 433
LLD+ + C++ PTR+ K G+VI+
Sbjct: 630 KLLLDLEAEQDFKCLIT--QPTRVEKRGDVIT 659
Score = 34.7 bits (76), Expect = 2.6
Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 14/152 (9%)
Frame = +2
Query: 20 PDFVFKIPGYSCLREDRADGYGGVCLLIRNSSTFSSFPLPSHSNCFSVIAAIV----DGI 187
PD F + GYS R DR G GG+ LI + + + +A + +
Sbjct: 821 PDSQFSMAGYSLYRNDRKKGGGGIMALISTALVKKRLKINKNYKTVETLAFEIKTNKGNM 880
Query: 188 CFVSIYVP------HPSLQIFNEIK---NLISVLPRPFMILGDFNSHHTSWGSSVSNSYG 340
+ IY P + L++ NE+ N S+ ++LGD N G
Sbjct: 881 VILGIYRPPTLLCGNYRLELENELSELCNWASLQANFVVVLGDLNLDRL----KPEKPEG 936
Query: 341 YELLDI-LDMYSLCILNSGSPTRLTKPGEVIS 433
LLD+ + C++ PTR+ K G+VI+
Sbjct: 937 KLLLDLEAEQDFKCLIT--QPTRVEKRGDVIT 966
>UniRef50_Q0TVA8 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1366
Score = 34.7 bits (76), Expect = 2.6
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Frame = +2
Query: 275 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSP--TRLTKPGEVISAIDLS 448
++LGDFN HH WG E +++ + LN+ P T + S IDL
Sbjct: 229 ILLGDFNLHHPLWGGPAVRRIHAESEELVAIIEDFDLNNTLPIGTVTFEEANWRSTIDLC 288
Query: 449 ICTPQLASSLSWSTLCS--TYNSDHYPI 526
+ T L + S + ++SDH PI
Sbjct: 289 LVTMGLVDRVISSEITRDLDHDSDHLPI 316
>UniRef50_Q01379 Cluster: Contains reverse transcriptase and cys
finger domains; ORF2; n=2; Neurospora crassa|Rep:
Contains reverse transcriptase and cys finger domains;
ORF2 - Neurospora crassa
Length = 1154
Score = 34.7 bits (76), Expect = 2.6
Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Frame = +2
Query: 281 LGDFNSHHTSWGSSVSNSYG-YELLDILDMYSLCILN-SGSPTRL--TKPGEVISAIDLS 448
+GD N HH W S G LL + L +L G PTRL GE ID +
Sbjct: 135 VGDLNLHHPDWDLENRTSPGAARLLTWARRWRLSLLTPRGEPTRLGNATRGERDGTIDHA 194
Query: 449 ICTPQLASSLSWSTLCSTYNSDHYP 523
+P + + + C SDH P
Sbjct: 195 WLSPGVEAEYWGAQRCEQTGSDHCP 219
>UniRef50_A2QSP9 Cluster: Contig An08c0290, complete genome; n=7;
Trichocomaceae|Rep: Contig An08c0290, complete genome -
Aspergillus niger
Length = 1644
Score = 34.7 bits (76), Expect = 2.6
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Frame = +2
Query: 275 MILGDFNSHHTSWGSS-VSNSY---GYELLDILDMYSL-CILNSGSPT--RLTKPGEVIS 433
++ GDFN HH +WG + V + + EL++ + YSL L G+ T L+ PG S
Sbjct: 507 ILSGDFNRHHPAWGGNHVQSRFIEDASELINFFNTYSLRSCLPRGTATFWSLSHPGR-NS 565
Query: 434 AIDLSICTPQLASSLSWSTLCSTYNSDH 517
ID ++ T + L Y SDH
Sbjct: 566 TIDQTL-TDRPGMLLKCHLYHDNYGSDH 592
>UniRef50_Q97WP1 Cluster: Putative uncharacterized protein; n=1;
Sulfolobus solfataricus|Rep: Putative uncharacterized
protein - Sulfolobus solfataricus
Length = 395
Score = 33.9 bits (74), Expect = 4.6
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Frame = +2
Query: 65 DRADGYGGVCLLIRNSSTFSSFPLPSHSNCFSVIAAIVDGICFVSIYVPHPSLQIFNEI- 241
DR GV ++I N S S PL V + + SI+ S + ++
Sbjct: 254 DRISNNIGVDVIIGNPSPISYLPLSIDKLKNKVESKVTKKHGLSSIHYSGVSSDVVKDVN 313
Query: 242 ---KNLISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMY 370
K+++S++P F+IL D + + N + LD+LD Y
Sbjct: 314 FTSKDILSIIPIAFIILADSKKKFEEYVERIINGPTADGLDLLDEY 359
>UniRef50_UPI0000E496D4 Cluster: PREDICTED: similar to CR1 Danio
rerio 2 reverse transcriptase isoform 3; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
CR1 Danio rerio 2 reverse transcriptase isoform 3 -
Strongylocentrotus purpuratus
Length = 958
Score = 33.5 bits (73), Expect = 6.0
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 18/119 (15%)
Frame = +2
Query: 2 SETWLKPD---FVFKI--PGYSCLREDRADGYGG-VCLLIRNSSTFSSFPLPSHSNCFS- 160
+ETWL + + ++ PGY+ R G GG V L+R+ + H F
Sbjct: 114 TETWLTENDDAVIAEVTPPGYTFTNVPRTGGRGGGVGALVRSDLKLHQVTIDPHFTTFEH 173
Query: 161 -VIAAIVDGICFVSIYVPHPS----------LQIFNEIKNLISVLPRPFMILGDFNSHH 304
+I + +V++Y P PS L+ F+ + ++ P ++LGD N H+
Sbjct: 174 CIITDKARSVNYVAVYRPPPSSTNGLKTSTFLEEFDSFIDDMNQTPGKLLLLGDLNVHY 232
>UniRef50_UPI0000D578A9 Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 894
Score = 33.1 bits (72), Expect = 8.0
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 284 GDFNSHHTSWGSSVSNSYGYELLDILDMY-SLCILNSGSPTRLTKPGEVISAIDLSICTP 460
GDFN+ H +W S SN G L D + + +L PT +D++I
Sbjct: 431 GDFNAKHINWESRRSNRNGNILNGFTDQHLDISVLAPVEPTFYRNSDGAADILDVAI-VK 489
Query: 461 QLASSLSWSTLCSTYNSDHYPIII 532
+ + S + + +SDH P+++
Sbjct: 490 NVVHQVRLSAI-NDLSSDHNPVLM 512
>UniRef50_Q1E604 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 493
Score = 33.1 bits (72), Expect = 8.0
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +2
Query: 275 MILGDFNSHHTSWGSSVS--NSYGYELLDILDMYSL-CILNSGSPTRLTKPGEVISAIDL 445
+++G+FN HH WG + + + EL+ ++ ++ L +L GS T GE + +DL
Sbjct: 265 IVVGNFNLHHPLWGGAGTRQDPESEELIQLMGLHQLQSLLPPGSVT-YQNLGE--TTVDL 321
Query: 446 SICTPQLASSLSWSTLCS--TYNSDHYPI 526
++ TP + + + + SDH PI
Sbjct: 322 ALGTPWVHERKVFCGVREDLDHQSDHLPI 350
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,925,886
Number of Sequences: 1657284
Number of extensions: 13808443
Number of successful extensions: 33146
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 32090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33112
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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