Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc13e16
         (819 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    29   0.13 
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    24   6.5  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    24   6.5  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 29.5 bits (63), Expect = 0.13
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -2

Query: 635 RHAPV*NGQNG-CALQANTAADVCDERAYG 549
           +HA + + + G C  Q NTA D CD+ A G
Sbjct: 731 KHAEICDSETGRCICQHNTAGDTCDQCAKG 760


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +1

Query: 253 PDCLS*NR--YSTHILNVHNLNRFRDRP*HRFLDHY 354
           P  LS N   Y  +  ++HNL  F   P +RFL+ Y
Sbjct: 351 PSALSVNSQYYGNYHGHMHNLISFSHDPENRFLEGY 386


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +1

Query: 253 PDCLS*NR--YSTHILNVHNLNRFRDRP*HRFLDHY 354
           P  LS N   Y  +  N+HN+  +   P +RFL+ Y
Sbjct: 350 PSALSVNSQFYGNYHGNLHNIIAYSHDPDNRFLEGY 385


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 904,685
Number of Sequences: 2352
Number of extensions: 20197
Number of successful extensions: 39
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86902827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)