Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13d22
(769 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0056 + 7828453-7828717,7829425-7829427,7829658-7829912,782... 122 4e-28
04_04_0124 + 22929700-22929761,22930192-22930310,22930459-229305... 68 1e-11
05_07_0163 - 28094574-28094726,28095248-28095382,28095771-280959... 67 2e-11
12_02_1119 + 26213719-26213955,26214039-26214197,26214640-262147... 53 2e-07
06_01_0906 + 6990892-6991615,6992480-6992679,6992822-6993002,699... 53 2e-07
02_05_0710 - 31115116-31115214,31115747-31115851,31116210-311162... 53 3e-07
05_04_0325 + 20289666-20289675,20290137-20290382,20291241-202914... 48 6e-06
05_01_0338 + 2665412-2665564,2665647-2665766,2666344-2666397,266... 48 8e-06
05_01_0327 - 2565574-2565654,2566037-2566099,2566511-2566591,256... 43 2e-04
02_05_0497 - 29502012-29502101,29502128-29502197,29502302-295024... 42 5e-04
05_01_0469 - 3725117-3725170,3725282-3725356,3726938-3727015,372... 39 0.005
05_01_0342 - 2691294-2691441,2691589-2691667,2691737-2691799,269... 38 0.012
03_06_0662 + 35377974-35378270,35378354-35378623,35378795-353789... 35 0.082
03_05_0122 - 21025469-21026719 34 0.11
01_05_0026 - 17315805-17315831,17315930-17316010,17316809-173168... 34 0.11
08_01_0316 + 2802057-2802474,2802575-2802712,2802803-2802891,280... 34 0.14
06_01_0302 + 2188905-2188989,2189309-2189406,2189487-2189753,218... 34 0.14
09_04_0245 + 15995689-15995742,15995979-15996075,15996165-159961... 33 0.19
03_06_0646 + 35260497-35262371,35262500-35262683,35262906-352630... 33 0.25
08_01_0304 - 2502760-2502774,2502844-2502921,2503035-2503103,250... 31 0.77
05_01_0329 - 2580083-2580115,2580787-2580864,2580986-2581078,258... 31 1.0
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 31 1.0
06_02_0135 + 12188739-12189086,12189191-12189272,12189397-121895... 30 2.3
03_06_0629 + 35187318-35187320,35187424-35187534,35188089-351881... 29 3.1
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 29 3.1
08_01_0306 - 2570411-2570419,2570809-2570886,2571464-2571671,257... 29 4.1
01_06_0899 + 32837027-32837215,32837366-32837547,32839056-328391... 29 4.1
11_01_0287 - 2137425-2137581,2137981-2138117,2138246-2138515,213... 29 5.4
09_02_0521 + 10162396-10162587,10162687-10163679 29 5.4
07_03_1435 - 26532302-26533159,26533559-26534902,26535180-26535188 29 5.4
12_01_0278 - 2016172-2016262,2017057-2017140,2017701-2017837,201... 28 7.1
05_01_0333 - 2614123-2614202,2614466-2614553,2614644-2614721,261... 28 7.1
11_04_0167 + 14382976-14385244,14389373-14389842 28 9.4
11_01_0428 + 3279662-3279784,3281676-3281756,3281845-3281933,328... 28 9.4
07_03_1601 - 28047764-28047845,28048043-28048078,28048209-280483... 28 9.4
06_02_0097 + 11710560-11710859,11712605-11713270 28 9.4
>11_02_0056 +
7828453-7828717,7829425-7829427,7829658-7829912,
7829997-7830124,7831063-7831207,7832178-7832275,
7833253-7833395,7835119-7835239,7835492-7835584,
7835712-7835828
Length = 455
Score = 122 bits (293), Expect = 4e-28
Identities = 66/153 (43%), Positives = 99/153 (64%), Gaps = 4/153 (2%)
Frame = -1
Query: 652 GNSGGPLVNLDGEAIGINSMKV--TYGISFAIPIDYVKEFLAKHKTKSPQVSKRYLGITM 479
GNSGGPLVNLDGE +G+N MKV G+SFA+PID + + + K K+ +V + +LG+ M
Sbjct: 299 GNSGGPLVNLDGEIVGVNVMKVWAADGLSFAVPIDSIVKIVENFK-KNGRVVRPWLGLKM 357
Query: 478 LSLTPSILMELKMRNPEMPTDIQHGILVWKVIIGSPAFNGGLQPGDIVVKINGKPVHNTT 299
L L P I+ +LK R+ P D+++G+LV V GSPA + G +PGD+VV+ +GK V +
Sbjct: 358 LDLNPMIIAQLKERSSSFP-DVKNGVLVPMVTPGSPAEHAGFRPGDVVVEFDGKLVESIK 416
Query: 298 DIYNILESTTG-SLKIDAVRGRQ-QINLTIVPE 206
+I +I+ G K+ R ++LT++PE
Sbjct: 417 EIIDIMGDKVGVPFKVLVKRANNVTVSLTVIPE 449
>04_04_0124 +
22929700-22929761,22930192-22930310,22930459-22930541,
22930640-22930738,22930769-22930786,22931044-22931110,
22931244-22931319,22931450-22931516,22932303-22932520,
22933124-22933191,22933743-22933822,22934362-22934448,
22934524-22934631,22934753-22934848,22935045-22935140,
22936826-22937155
Length = 557
Score = 67.7 bits (158), Expect = 1e-11
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 8/214 (3%)
Frame = -1
Query: 760 NTVTAGVVSXTQR-AGSELGLQDRNIVYIQTDAPITFGNSGGPLVNLDGEAIGINSMKVT 584
+ +T GV+S R S+ G+ IQTDA I GNSGGPL++ G IGIN+ T
Sbjct: 233 HALTVGVISGLNRDIFSQAGVTIGG--GIQTDAAINPGNSGGPLLDSKGHMIGINTAIFT 290
Query: 583 Y-----GISFAIPIDYVKEFLAKHKTKSPQVSKRYLGITMLSLTPSILMELKMRNPEMPT 419
G+ FAIP V + +A + +V R G+ + I +L +R +
Sbjct: 291 QTGTSAGVGFAIPSSTVLK-IAPQLIQFGKV--RRAGLNVEFAPDPIAYQLNVRTGSLIL 347
Query: 418 DIQHGILVWK--VIIGSPAFNGGLQPGDIVVKINGKPVHNTTDIYNILESTTGSLKIDAV 245
+ G K ++ S F G + GD++V ++GKP+ +D+ +L+ K+
Sbjct: 348 QVPGGSAAAKAGLVPTSRGFAGNIVLGDVIVAVDGKPIKGKSDLSRVLDDYGVGDKVSLT 407
Query: 244 RGRQQINLTIVPELH*YSLRRVFFLGEHTAQLMM 143
R L +VP+ Y+ + + + ++MM
Sbjct: 408 IQRGAETLEMVPQ---YTSEFLLIIRHNPLKIMM 438
>05_07_0163 -
28094574-28094726,28095248-28095382,28095771-28095923,
28096010-28096208,28096312-28096349,28096849-28097020,
28097666-28097788,28097869-28098284
Length = 462
Score = 66.9 bits (156), Expect = 2e-11
Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 7/179 (3%)
Frame = -1
Query: 766 LSNTVTAGVVSXTQRAGSELGLQDRNIVYIQTDAPITFGNSGGPLVNLDGEAIGINS--- 596
L +T+T GV+S +R S IQTDA I GNSGGPL++ G IG+N+
Sbjct: 240 LDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGNLIGVNTAIY 299
Query: 595 --MKVTYGISFAIPIDYVKEFLAKHKTKSPQVSKRYLGITMLSLTPSILMELKMRNPEMP 422
+ G+ F+IP+D V + K +V++ LGI P +E + +
Sbjct: 300 SPSGASSGVGFSIPVDTVGG-IVDQLIKFGKVTRPILGI---KFAPDQSVEQLGLSGVLV 355
Query: 421 TDIQHGILVWKVIIGSPAFN--GGLQPGDIVVKINGKPVHNTTDIYNILESTTGSLKID 251
D K + S + G L GDI+ +NG V N +D+Y IL+ K+D
Sbjct: 356 LDAPPNGPAGKAGLQSTKRDSYGRLILGDIITSVNGTKVTNGSDLYRILDQCKVGEKVD 414
>12_02_1119 +
26213719-26213955,26214039-26214197,26214640-26214702,
26214813-26214902,26214984-26215106,26215344-26215431,
26217043-26217117,26218109-26218215
Length = 313
Score = 53.2 bits (122), Expect = 2e-07
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Frame = -1
Query: 760 NTVTAGVVSXTQRA-GSELGLQDRNIVYIQTDAPITFGNSGGPLVNLDGEAIGINSMK-- 590
+T+T GVVS R S G R IQTDA I GNSGGPL++ G IG+N+
Sbjct: 219 HTLTTGVVSGLGREIPSPNGRPIRGA--IQTDAAINSGNSGGPLIDSYGHVIGVNTATFT 276
Query: 589 -----VTYGISFAIPIDYVKEFLAKHKTKSPQVSKRY 494
++ G++FAIPID V + + VS R+
Sbjct: 277 RKGTGISSGVNFAIPIDTVVQSVPNLIVYGTSVSNRF 313
>06_01_0906 +
6990892-6991615,6992480-6992679,6992822-6993002,
6993855-6994046,6994492-6994724,6995537-6995638,
6995776-6995826,6996234-6996338,6997287-6997353,
6997946-6997962
Length = 623
Score = 53.2 bits (122), Expect = 2e-07
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 4/155 (2%)
Frame = -1
Query: 757 TVTAGVVSXTQRAGSELGLQDRNIVYIQTDAPITFGNSGGPLVNLDGEAIGINSMKVTY- 581
+VT+GVVS + G + ++ +Q DA I GNSGGP N G+ +GI + +
Sbjct: 283 SVTSGVVSRIEILSYVHGSTE--LLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHE 340
Query: 580 ---GISFAIPIDYVKEFLAKHKTKSPQVSKRYLGITMLSLTPSILMELKMRNPEMPTDIQ 410
I + IP + F+ + + S Y G +L + + +R Q
Sbjct: 341 DVENIGYVIPTPVINHFIQDY-----EKSGEYTGFPILGIEWQKMENPDLRKAMGMKSDQ 395
Query: 409 HGILVWKVIIGSPAFNGGLQPGDIVVKINGKPVHN 305
G+ V +V +P +G LQP DI++ +G + N
Sbjct: 396 KGVRVRRVEPTAPE-SGCLQPSDIILSFDGIDIAN 429
>02_05_0710 -
31115116-31115214,31115747-31115851,31116210-31116260,
31116393-31116494,31116651-31116883,31117306-31117497,
31118142-31118322,31118424-31118623,31119105-31119645
Length = 567
Score = 52.8 bits (121), Expect = 3e-07
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 4/155 (2%)
Frame = -1
Query: 757 TVTAGVVSXTQRAGSELGLQDRNIVYIQTDAPITFGNSGGPLVNLDGEAIGINSMKVTY- 581
+VT+GVVS + G + ++ +Q DA I GNSGGP N G+ +GI + +
Sbjct: 222 SVTSGVVSRIEILSYVHGSTE--LLGLQIDAAINSGNSGGPAFNDRGKCVGIAFQSLKHE 279
Query: 580 ---GISFAIPIDYVKEFLAKHKTKSPQVSKRYLGITMLSLTPSILMELKMRNPEMPTDIQ 410
I + IP + F+ ++ LGI + L + P+ Q
Sbjct: 280 DAENIGYVIPTPVIMHFIQDYEKSGEYTGFPILGIEWQKMENPDLRKAMGMKPD-----Q 334
Query: 409 HGILVWKVIIGSPAFNGGLQPGDIVVKINGKPVHN 305
G+ V +V +P +G LQP DI++ +G + N
Sbjct: 335 KGVRVRRVEPTAPE-SGCLQPSDIILSFDGIDIAN 368
>05_04_0325 +
20289666-20289675,20290137-20290382,20291241-20291436,
20291517-20291776,20291934-20292061,20292447-20292650,
20292780-20292830,20292961-20293227
Length = 453
Score = 48.4 bits (110), Expect = 6e-06
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Frame = -1
Query: 757 TVTAGVVSXTQRAGSELGLQDRNIVYIQTDAPITFGNSGGPLVNLDGEA-IGINSMKVTY 581
+VT GVVS + G ++ IQ DA I GNSGGP + D A + ++
Sbjct: 91 SVTKGVVSRVEPTQYAHGATQ--LMAIQIDAAINPGNSGGPAIMGDKVAGVAFQNLSGAE 148
Query: 580 GISFAIPIDYVKEFLAKHKTKSPQVSKRYLGITMLSLTPSILMELKMRNP-EMPTDIQHG 404
I + IP+ +K F++ + S +Y G L ++ +++R M D+ G
Sbjct: 149 NIGYIIPVPVIKRFIS-----GVEESGKYSGFCTLGISCQATENIQLRECFGMKPDLT-G 202
Query: 403 ILVWKVIIGSPAFNGGLQPGDIVVKINGKPVHN 305
+LV ++ S A + L+ DI+++ +G P+ N
Sbjct: 203 VLVSRINPLSDA-HRVLKKDDILLEFDGVPIAN 234
>05_01_0338 +
2665412-2665564,2665647-2665766,2666344-2666397,
2666583-2666660,2667608-2667652,2668327-2668434,
2668629-2668706,2669352-2669457,2669622-2669680,
2670465-2670564,2670932-2671011,2671132-2671188,
2671321-2671424,2671799-2671886,2671971-2672056,
2672140-2672185,2672246-2672317,2672541-2672601,
2672692-2672936
Length = 579
Score = 48.0 bits (109), Expect = 8e-06
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Frame = -1
Query: 691 NIVYIQTDAPITFGNSGGPLVNLDGEAIGIN----SMKVTYGISFAIPIDYVKEFLAKHK 524
+++ IQ DA I GNSGGP N GE IG+ I + IP V FL ++
Sbjct: 235 DLLGIQIDAAINPGNSGGPAFNDHGECIGVAFQVFRSDEAENIGYVIPTTVVSHFLNDYQ 294
Query: 523 TKSPQVSKRYLGITMLSL-TPSILMELKMRNPEMPTDIQHGILVWKVIIGSPAFNGGLQP 347
LG+ + L P++ LK+ + E G+LV +V +PA + L+
Sbjct: 295 KNGKYTGFPCLGVLLQKLENPALRESLKVPSSE-------GVLVRRVEPTAPA-SKVLRK 346
Query: 346 GDIVVKINGKPV 311
GD++ +G V
Sbjct: 347 GDVITSFDGVAV 358
>05_01_0327 -
2565574-2565654,2566037-2566099,2566511-2566591,
2566710-2566787,2566892-2566984,2567108-2567225,
2567568-2567695,2567808-2568083,2568763-2568917,
2568997-2569140,2569427-2569844
Length = 544
Score = 43.2 bits (97), Expect = 2e-04
Identities = 39/136 (28%), Positives = 71/136 (52%), Gaps = 1/136 (0%)
Frame = -1
Query: 685 VYIQ-TDAPITFGNSGGPLVNLDGEAIGINSMKVTYGISFAIPIDYVKEFLAKHKTKSPQ 509
+YI DA + N GGP+++ G+ +G+ ++ T G SF IP + + + L K K
Sbjct: 321 MYIHGVDAASEYYN-GGPVIDFRGDVVGMYNLS-TRG-SF-IPSNILLKCLQLWK-KFHY 375
Query: 508 VSKRYLGITMLSLTPSILMELKMRNPEMPTDIQHGILVWKVIIGSPAFNGGLQPGDIVVK 329
+ + +L + + + L + +I G++V +V IGS A G++ GDI+
Sbjct: 376 IPRPHLQLKLWGI--KFLEPAHIEIISCKCNIDDGLIVEEVSIGSCAERLGVRVGDIIEC 433
Query: 328 INGKPVHNTTDIYNIL 281
NGK + +T ++ N+L
Sbjct: 434 FNGKCISSTVELENML 449
>02_05_0497 -
29502012-29502101,29502128-29502197,29502302-29502411,
29502530-29502641,29503341-29503498,29503592-29503807,
29504127-29504354,29504722-29504801,29504886-29505056,
29505179-29505281,29505369-29505551,29506313-29506813,
29506935-29507100,29507517-29507566,29508047-29508127,
29508291-29508398,29508874-29508939,29509053-29509109,
29509442-29509507,29509917-29510006,29510850-29510975,
29511681-29511717,29512192-29512250,29512562-29512615,
29513294-29513428,29513542-29513612,29513720-29513957
Length = 1141
Score = 41.9 bits (94), Expect = 5e-04
Identities = 42/187 (22%), Positives = 82/187 (43%), Gaps = 18/187 (9%)
Frame = -1
Query: 706 GLQDRNIVYIQTDAPITFGNSGGPLVNLDGEAIGINS-MKVTYGISFAIPIDYVKEFL-- 536
G D N Y+Q + G+SG P+V+ G A+ +N+ K + +F +P++ V L
Sbjct: 188 GYNDFNTFYMQAASGTKGGSSGSPVVDCQGRAVALNAGSKSSSASAFFLPLERVVRALNL 247
Query: 535 -------AKHKTKSPQVSKRYLGITMLSLTPSILMELKMRNPE------MPTDIQHGILV 395
K +S + + L +T L +RN + + G+LV
Sbjct: 248 IRDSWEAFGSKPESDYIPRGTLQVTFQHKGFEETRRLGLRNETEQMVRLVSPSGETGMLV 307
Query: 394 WKVIIGSPAFNGGLQPGDIVVKINGKPVHNTTDIYNILESTTG-SLKIDAVRGRQQINLT 218
++ + L+PGD++V++N + V + +L+ + G + + RG + +
Sbjct: 308 VDSVVPEGPAHKHLEPGDVLVRMNDEVVTQFLAMETLLDDSVGKEIDLQIERGGTPLTVK 367
Query: 217 I-VPELH 200
+ V +LH
Sbjct: 368 LEVEDLH 374
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -1
Query: 409 HGILVWKVIIGSPAFNGGLQPGDIVVKINGKPVHNTTDIYNILESTTGSLKIDAVRGR 236
HG+ V + GSP GL +V++NGKP T D+ ++ G + VR R
Sbjct: 1009 HGVYVARWCHGSPVHRYGLYALQWIVEVNGKP---TPDLETFIQVVKGLENGEFVRVR 1063
>05_01_0469 -
3725117-3725170,3725282-3725356,3726938-3727015,
3727091-3727183,3727582-3727696,3728028-3728158,
3728243-3728512,3728983-3729120
Length = 317
Score = 38.7 bits (86), Expect = 0.005
Identities = 34/134 (25%), Positives = 60/134 (44%)
Frame = -1
Query: 682 YIQTDAPITFGNSGGPLVNLDGEAIGINSMKVTYGISFAIPIDYVKEFLAKHKTKSPQVS 503
Y+ DA +GG L N + + + + ++F IP + + A K K ++
Sbjct: 127 YLFIDASDCEDCNGGALTNFNRNIVSM-VLYALPNVAF-IPSSLILKCFALWK-KFRKLG 183
Query: 502 KRYLGITMLSLTPSILMELKMRNPEMPTDIQHGILVWKVIIGSPAFNGGLQPGDIVVKIN 323
+ +LG L LT + L + N I G++V KV GSPA G++ GD++
Sbjct: 184 RPHLG---LKLTVNFLDISHLENLSRVYGISSGLIVAKVSNGSPAERNGIRMGDVIFHCQ 240
Query: 322 GKPVHNTTDIYNIL 281
+ + T ++L
Sbjct: 241 QESISTTAQFEDVL 254
>05_01_0342 -
2691294-2691441,2691589-2691667,2691737-2691799,
2692852-2692917,2694939-2695004,2695194-2695283,
2695376-2695463,2695552-2695629,2695732-2695824,
2695907-2696024,2696418-2696539,2696633-2696930,
2697645-2697649
Length = 437
Score = 37.5 bits (83), Expect = 0.012
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Frame = -1
Query: 703 LQDRN-IVYIQTDAPITFGNSGGPLVNLDGEAIGINSMKVTYGISFAIPIDYVKEFLAKH 527
L DR+ +Y+ + P FG GG +++L G+ +G+ + + I ++ + +K +
Sbjct: 86 LCDRHHYMYVSSAIP-EFG-LGGLVIDLKGKVVGMTGLIHAF-IPSSVILKCLKLWHKFR 142
Query: 526 KTKSPQVSKRYLGITMLSLTPSILMELKMRNPEMPTDIQHGILVWKVIIGSPAFNGGLQP 347
PQ+ + I L L P I M L+ T I G++V +V GS G++
Sbjct: 143 CIPRPQLGVKLWAIKFLDL-PHIEMILRK------THICDGLIVKEVSEGSILEKLGVRI 195
Query: 346 GDIVVKINGKPVHNTTDIYNIL 281
GDI+ +NG+ +++T + +L
Sbjct: 196 GDIIECLNGERIYDTIQLEELL 217
>03_06_0662 +
35377974-35378270,35378354-35378623,35378795-35378973,
35380073-35380116,35380295-35380384,35380472-35380588,
35380679-35380803,35380883-35381155,35381253-35381386,
35381518-35381604,35381714-35381831
Length = 577
Score = 34.7 bits (76), Expect = 0.082
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = -1
Query: 706 GLQDRNIVYIQTDAPITFGNSGGPLVNLDGEAIGINSMKVTYGISFAIPIDYVKEFLAKH 527
G D N + I++ T GGPL+ LDG+ IG+N G + +P D + + LA
Sbjct: 449 GTLDCNFL-IRSSCKTTKAGIGGPLIGLDGKVIGMNFYDKKIGTPY-MPWDVILKILACF 506
Query: 526 KTKS 515
+ +S
Sbjct: 507 ENES 510
>03_05_0122 - 21025469-21026719
Length = 416
Score = 34.3 bits (75), Expect = 0.11
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Frame = -1
Query: 406 GILVWKVIIGSPAFNGGLQPGDIVVKING-KPVHNTTDIYNILE-------STTGSLKID 251
G+LV +VI GS A GL PGD+++ + G P + + ++++ S T S
Sbjct: 179 GVLVPEVIPGSAAARAGLLPGDVILSVPGLAPDPSVPVLVDLIKASPNKDVSVTVSRTGP 238
Query: 250 AVRGRQQINLTIVPE 206
R+ I+LT+VP+
Sbjct: 239 GPGDRRSIDLTVVPD 253
>01_05_0026 -
17315805-17315831,17315930-17316010,17316809-17316871,
17317542-17317620,17317711-17317928,17319688-17319879
Length = 219
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/79 (29%), Positives = 35/79 (44%)
Frame = -3
Query: 515 PSSLEALPRHHHALINAFHTHGVEDEKSRDANRYSTRYPCMEGHHWISGFQRGSTTRRHC 336
P + P+HHHA + A H H + + R P +G W G QR S +
Sbjct: 42 PQATPPPPQHHHASL-ASHFHLLHCRCNAAGGRLGRPAPGQDGEQWRVGDQRLSMS---- 96
Query: 335 SQNKRKTSSQYNRYIQHSR 279
S+++R+ Q+ HSR
Sbjct: 97 SRSRRRLGEQWRDEQTHSR 115
>08_01_0316 +
2802057-2802474,2802575-2802712,2802803-2802891,
2803711-2803980,2804063-2804193,2804364-2804481,
2804561-2804650,2804731-2804799,2804846-2804854,
2804903-2804980,2805249-2805303,2805810-2806003
Length = 552
Score = 33.9 bits (74), Expect = 0.14
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Frame = -1
Query: 706 GLQDRNIVYIQTDAPITFGNSGGPLVNLDGEAIGINSMKVTYGISFAIPIDYVKEFLAKH 527
GL +++ D P G SGGP+V+ DG IGI + G I I ++ +
Sbjct: 290 GLLTNPYMFLSCDIPE--GGSGGPVVDHDGNIIGI-AFDRNPG-PVVISITTIRTCIEMW 345
Query: 526 KTKSPQVSKRYLGITMLSLTPSILMELKMRNPE-MPTDIQHGILVWKVIIGSPAFNGGLQ 350
S +V++ LG+ + ++ L+++ MR + +I G +V V + S A G++
Sbjct: 346 HQFS-RVARPMLGMQLKAVE---LLDVSMREELCLEYNITGGFIVNLVKVDSTAERIGIR 401
Query: 349 PGDIVV 332
GD++V
Sbjct: 402 RGDVIV 407
>06_01_0302 +
2188905-2188989,2189309-2189406,2189487-2189753,
2189906-2189947,2190071-2190078,2190230-2190273,
2190615-2190695,2190779-2190907,2191017-2191114,
2191188-2191448,2191537-2191581,2191748-2191881,
2191965-2192045,2192127-2192308,2192632-2192746,
2192873-2193056,2193144-2193329
Length = 679
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 643 GGPLVNLDGEAIGINSMKVTYGISFAIPIDYVKEFLAKHKTKS 515
G PLVNLDG IG+N G F + + + + LA +TKS
Sbjct: 390 GSPLVNLDGNVIGMNFYDTRIGTPFLL-WEEICKILASFETKS 431
>09_04_0245 +
15995689-15995742,15995979-15996075,15996165-15996185,
15996442-15996573,15996707-15996834,15996919-15997203,
15997391-15997521,15999700-15999817,16000609-16000703,
16001437-16001511,16001860-16001911,16002767-16002859,
16003625-16003690,16003785-16003867,16003942-16004054,
16005271-16005410,16005569-16005643,16006084-16006160,
16006426-16006514,16008039-16008085,16009004-16009138,
16009298-16009345,16009605-16009667,16009709-16009730,
16010284-16010458,16014250-16014321,16014887-16014958,
16015904-16016005,16016197-16016225,16016333-16016403,
16016549-16016597,16016684-16016784,16017495-16017623,
16017683-16017752,16017975-16018194,16019368-16019389,
16019457-16019604,16021569-16021693,16022344-16022774,
16022984-16023110,16023241-16023292,16023351-16023502
Length = 1461
Score = 33.5 bits (73), Expect = 0.19
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -1
Query: 406 GILVWKVIIGSPAFNGGLQPGDIVVKINGKPVHNTTDIYNIL 281
G+ V GSPA + G+ GD++ K++G + + + Y ++
Sbjct: 391 GVYAETVFDGSPAADSGINVGDVITKLDGVDLFHAQEFYELI 432
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = -1
Query: 661 ITFGNSGGPLVNLDGEAIGINSMKVTYGISFAIPIDYVKEFLAKHKTKSPQVSKRYLGIT 482
IT GGPLV DG +G+N + +PI+ +++ L KH +V + +LG+
Sbjct: 237 ITKAGIGGPLVGFDGNFVGMNFCDKKE--TPFLPINIIRKCL-KHFDMFGRVVQPWLGLR 293
Query: 481 MLSL 470
+ SL
Sbjct: 294 IGSL 297
>03_06_0646 + 35260497-35262371,35262500-35262683,35262906-35263007,
35263101-35263231,35263315-35263584,35263765-35263943,
35264229-35264275,35264452-35264541,35264596-35264645,
35264673-35264725,35264886-35265009,35265094-35265369,
35265460-35265593,35265672-35265758,35265864-35265977,
35266180-35266309
Length = 1281
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 706 GLQDRNIVYIQTDAPITFGNSGGPLVNLDGEAIGIN 599
G D + I++ IT GGPLV+L+G+ IG+N
Sbjct: 1110 GTLDCEMFLIRSSCKITKAGIGGPLVDLEGKVIGMN 1145
>08_01_0304 -
2502760-2502774,2502844-2502921,2503035-2503103,
2503200-2503289,2503400-2503517,2505548-2505678,
2505756-2506025,2507175-2507308,2507635-2508088
Length = 452
Score = 31.5 bits (68), Expect = 0.77
Identities = 40/147 (27%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Frame = -1
Query: 769 DLSNTVTAGVVSXTQRAGSELGLQDRNIVYIQTDAPITFGNSGGPLVNLDGEAIGINSMK 590
++S V+ G +S T + L++ N+ ++ D P G SGGP+V+ G IGI ++
Sbjct: 254 NMSLMVSHGTISWTDYP---VLLRNHNM-FLSCDIPE--GGSGGPVVDHGGNMIGIAFVE 307
Query: 589 VTYGISFAIPIDYVKEFLAKHKTKSPQVSKRYLGITMLSLTPSILMELKMRNPEMPTD-- 416
G F I I + + S +V++ LG+ + S+ L+++ ++ E+ D
Sbjct: 308 -NPGPVF-ISIKTIMTCMEMWDQFS-RVARPLLGMQLKSVE---LLDVSIQE-ELCRDYN 360
Query: 415 IQHGILVWKVIIGSPAFNGGLQPGDIV 335
I G +V +V++ S A G++ GD++
Sbjct: 361 ITSGFIVSQVLVDSTAEKLGIRRGDVI 387
>05_01_0329 -
2580083-2580115,2580787-2580864,2580986-2581078,
2581209-2581326,2583350-2583440,2585167-2585207,
2585854-2585981,2586078-2586353,2587318-2587472,
2587557-2587700,2587991-2588567
Length = 577
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = -1
Query: 418 DIQHGILVWKVIIGSPAFNGGLQPGDIVVKINGKPVHNTTDIYNIL 281
+I G++V +V GS A G++ GD++ NGK + +T ++ +L
Sbjct: 501 NIDEGLIVKEVSEGSIAEKLGVRVGDVIKFFNGKHISSTVELELLL 546
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Frame = -3
Query: 524 NQVPSSLEALPRHHHALINAF--HTHGVEDEKSRDANRYSTRYPCMEGHHWISGFQRGST 351
N V SS+ +P ++ + F ++ +++ R + +++ + HW +G
Sbjct: 368 NNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEM 427
Query: 350 TRRHCSQNKRKTSSQYNRYIQHSRKYDGEFED*RRQRA 237
N S+Y +Y + +GE+ED +Q A
Sbjct: 428 EFTEAESNMNDLVSEYQQYQDATADEEGEYEDEEQQEA 465
>06_02_0135 +
12188739-12189086,12189191-12189272,12189397-12189527,
12189626-12189712,12189794-12189872,12190520-12190608,
12190765-12190806,12191030-12191149,12191819-12191968,
12192066-12192137,12192293-12192541
Length = 482
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1
Query: 403 ILVWKVIIGSPAFNGGLQPGDIVVKINGKPV 311
+LV I G PA GL GD +V+I+GK V
Sbjct: 216 LLVMDCIEGGPADRAGLHGGDELVEIDGKSV 246
>03_06_0629 +
35187318-35187320,35187424-35187534,35188089-35188191,
35188357-35188416,35188502-35188661,35188755-35188872
Length = 184
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 652 GNSGGPLVNLDGEAIGIN 599
G GGPLV+LDG +G+N
Sbjct: 39 GGIGGPLVDLDGNVLGMN 56
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Frame = -3
Query: 524 NQVPSSLEALPRHHHALINAF--HTHGVEDEKSRDANRYSTRYPCMEGHHWISGFQRGST 351
N V SS+ +P ++ + F ++ +++ R + +++ + HW +G
Sbjct: 347 NNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEM 406
Query: 350 TRRHCSQNKRKTSSQYNRYIQHSRKYDGEFED*RRQRAPADK 225
N S+Y +Y + +G++ED ++ P D+
Sbjct: 407 EFTEAESNMNDLVSEYQQYQDATADEEGDYED-EEEQVPEDE 447
>08_01_0306 -
2570411-2570419,2570809-2570886,2571464-2571671,
2573400-2573521,2573815-2573883,2573963-2574052,
2574113-2574230,2574956-2575086,2575195-2575464,
2577323-2577433,2577604-2578152
Length = 584
Score = 29.1 bits (62), Expect = 4.1
Identities = 31/124 (25%), Positives = 59/124 (47%)
Frame = -1
Query: 703 LQDRNIVYIQTDAPITFGNSGGPLVNLDGEAIGINSMKVTYGISFAIPIDYVKEFLAKHK 524
L + + +++ D P G SGGP+++ DG IGI G I ++ +
Sbjct: 296 LLNNHYMFLSCDIPE--GGSGGPVIDHDGNIIGI-VFDNNPG-PVVTSITTIRTCVEMWH 351
Query: 523 TKSPQVSKRYLGITMLSLTPSILMELKMRNPEMPTDIQHGILVWKVIIGSPAFNGGLQPG 344
S +V++ LG+ + ++ +L K+ + +I G +V V + S A G++ G
Sbjct: 352 QFS-RVARPILGMQLKAV--ELLDVSKLEELCLDNNITSGFIVNLVKVDSIAERLGIRRG 408
Query: 343 DIVV 332
D++V
Sbjct: 409 DVIV 412
>01_06_0899 +
32837027-32837215,32837366-32837547,32839056-32839102,
32839426-32839500,32839595-32839726,32839800-32839972,
32840005-32840277,32840386-32840519,32840640-32840726,
32840834-32840948
Length = 468
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 661 ITFGNSGGPLVNLDGEAIGINSMKVTYGISF 569
IT GGPL++ DG +GIN G F
Sbjct: 355 ITKAGIGGPLIDFDGRYVGINFFDDIVGTPF 385
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -1
Query: 682 YIQTDAPITFGNSGGPLVNLDGEAIGINSMKVTYGISFAIPIDYVKEFLAKHKT 521
++ + I+ G GG L + DG IG+N + + G S +PI + E L +T
Sbjct: 54 FMLSTCKISEGWEGGALFDSDGNLIGMNLLFLV-GRSLFLPISIIIERLEYFRT 106
>11_01_0287 -
2137425-2137581,2137981-2138117,2138246-2138515,
2138591-2138716,2138790-2138932,2139032-2139117,
2139574-2139752,2139941-2140210,2140282-2140380
Length = 488
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -1
Query: 643 GGPLVNLDGEAIGINSMKVTYGISFAIPIDYVKEFL 536
GGPL + DG+ +G+N T G F +P D V + L
Sbjct: 127 GGPLFDFDGDFLGMNLSLTTEGTLF-VPGDRVLDQL 161
>09_02_0521 + 10162396-10162587,10162687-10163679
Length = 394
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 562 PIDYVKEFLAKHKTKSPQVSKRYLGI 485
PI +V E LA KT+ PQV K G+
Sbjct: 316 PIYFVSEVLADSKTRYPQVQKLLYGV 341
>07_03_1435 - 26532302-26533159,26533559-26534902,26535180-26535188
Length = 736
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 562 PIDYVKEFLAKHKTKSPQVSKRYLGI 485
PI +V E LA KT+ PQV K G+
Sbjct: 186 PIYFVSEVLADSKTRYPQVQKLLYGV 211
>12_01_0278 -
2016172-2016262,2017057-2017140,2017701-2017837,
2017961-2018230,2018306-2018430,2018515-2018646,
2018744-2018821,2019177-2019220,2019803-2019981,
2020168-2020428,2020528-2020655,2020749-2020853,
2020932-2021073
Length = 591
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -1
Query: 643 GGPLVNLDGEAIGINSMKVTYGISFAIPIDYVKEFL 536
GGPL + DG+ +G+N T G F +P D V + L
Sbjct: 216 GGPLFDFDGDFLGMNLSFTTEGTVF-VPGDRVLDQL 250
>05_01_0333 -
2614123-2614202,2614466-2614553,2614644-2614721,
2614795-2614887,2614982-2615101,2615685-2615726,
2615822-2616091,2617188-2617339,2617771-2618233
Length = 461
Score = 28.3 bits (60), Expect = 7.1
Identities = 24/78 (30%), Positives = 39/78 (50%)
Frame = -1
Query: 514 PQVSKRYLGITMLSLTPSILMELKMRNPEMPTDIQHGILVWKVIIGSPAFNGGLQPGDIV 335
PQ+ + I L L P I M L+ + I G++V +V GS G++ GDI+
Sbjct: 315 PQLGVKLSAIKFLDL-PHIEMILRKIH------ICDGLIVEEVSSGSTIEKLGVRVGDII 367
Query: 334 VKINGKPVHNTTDIYNIL 281
+NG+ V +T + +L
Sbjct: 368 QHLNGEWVSDTIQLEEML 385
>11_04_0167 + 14382976-14385244,14389373-14389842
Length = 912
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 112 LLSSMNDGNHSSSIEPYARPKKKHVEDYISVTLEQW 219
LL + H ++ EPY RP H + +S ++QW
Sbjct: 827 LLEVADLARHCTAREPYQRPDMCHCVNRLSSLVDQW 862
>11_01_0428 +
3279662-3279784,3281676-3281756,3281845-3281933,
3282011-3282085,3282211-3282269,3282316-3282414,
3282762-3283013,3283050-3283180
Length = 302
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 234 WRPLTASIFKLPVVLSRMLYISVVL*TGFPFILTTMSPGCRPPLKAGDPMMTF 392
W PL + LP+ +R ++S++ T L T+SPG +PP+ A + F
Sbjct: 89 WEPLEEGL--LPLETTR--HVSMIAITLSKKALDTLSPGYQPPIPAEEVRPAF 137
>07_03_1601 -
28047764-28047845,28048043-28048078,28048209-28048339,
28048695-28048967,28049039-28049166,28049250-28049369,
28049461-28049538,28049598-28049669,28049790-28049849,
28050096-28050217,28052918-28053048,28053382-28053534,
28053628-28053755,28053831-28053968,28054056-28054144,
28055741-28055878,28056870-28057102
Length = 703
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -1
Query: 643 GGPLVNLDGEAIGINSMKVTYGISFAIPIDYVKEFLAKHKTKSPQVSK 500
GGPL++LDG +G+N F +P + E +A KT ++ K
Sbjct: 297 GGPLIDLDGNFVGMN-FYAKKRTPF-LPRSTITECMANFKTYRGELKK 342
>06_02_0097 + 11710560-11710859,11712605-11713270
Length = 321
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 138 PLIIN*AVCSPKKKTRRRLYQCNSGTMVRFICWRPLT 248
P +++ ++C + R LYQC +G + F CW L+
Sbjct: 82 PDVLDCSICF--ESLRPPLYQCQNGHVACFSCWSKLS 116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,644,142
Number of Sequences: 37544
Number of extensions: 487129
Number of successful extensions: 1260
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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