Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc13d22
         (769 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69978-1|CAA93818.1|  268|Anopheles gambiae serine protease prot...    25   1.9  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    25   3.4  
U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease prot...    24   4.5  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    24   4.5  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   5.9  

>Z69978-1|CAA93818.1|  268|Anopheles gambiae serine protease
           protein.
          Length = 268

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 652 GNSGGPLVNLDGEAIGI 602
           G+SGGPLV +D E + +
Sbjct: 217 GDSGGPLVQIDDEIVQV 233


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 152 IDDEWLPSFMEDSNFKGRAKP 90
           +D EW P  +++  +KG  KP
Sbjct: 254 MDGEWEPPMIDNPEYKGEWKP 274


>U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease
           protein.
          Length = 271

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +1

Query: 688 YFCLVSQVRFQLSEXN 735
           Y  LVS VRF LSE N
Sbjct: 16  YLALVSGVRFHLSEQN 31


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -1

Query: 355 LQPGDIVVKINGKPV-HNT-TDIYNILESTTGSLKIDAV 245
           L  GD + +ING+PV H T + +  +L    GS+    V
Sbjct: 516 LHVGDEIREINGQPVQHQTVSQLQRLLRDARGSVTFKIV 554


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = -1

Query: 499 RYLGITMLSLTPSILMELKMRNPEMPTDIQHGILVW 392
           +YL  TM+ +T S+++ + + N    + + H +  W
Sbjct: 304 KYLLFTMMLVTLSVVVTIAVLNVNFRSPVTHRMAPW 339


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 836,681
Number of Sequences: 2352
Number of extensions: 18953
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)