Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13d22
(769 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 32 0.007
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 24 1.8
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 3.1
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 3.1
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 23 4.1
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 5.5
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 5.5
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 9.5
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.5
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 9.5
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 31.9 bits (69), Expect = 0.007
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 11/84 (13%)
Frame = -3
Query: 512 SSLEALPRHHHALINAFHTHGVEDEKSRD------ANRYSTRYP---CMEGHH--WISGF 366
++L LPR H+ + G E EKS D A++ R P C H W++G
Sbjct: 38 TTLNWLPRTHYDHLKEIVIGGFEIEKSEDDSFNNQADKSEKRIPLYVCRVLHTTVWVAGA 97
Query: 365 QRGSTTRRHCSQNKRKTSSQYNRY 294
QRG+ R C+ T Y++Y
Sbjct: 98 QRGNEQR--CTVTMHGTVQSYDKY 119
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 23.8 bits (49), Expect = 1.8
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = -1
Query: 406 GILVWKVIIGSPAFNGG 356
G+L+++++ G+P F GG
Sbjct: 552 GVLMFELLTGTPPFTGG 568
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 357 PPLKAGDPMMTFH 395
PP GDPM T++
Sbjct: 563 PPFTGGDPMKTYN 575
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.0 bits (47), Expect = 3.1
Identities = 13/58 (22%), Positives = 23/58 (39%)
Frame = -3
Query: 437 KSRDANRYSTRYPCMEGHHWISGFQRGSTTRRHCSQNKRKTSSQYNRYIQHSRKYDGE 264
+ R+ N Y + G R T R + K +S+ YN Y ++ Y+ +
Sbjct: 265 REREQNSYKNEREYRKYRETSKGRSRDRTERERSKETKIISSNNYN-YKNYNNNYNSK 321
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.1
Identities = 13/58 (22%), Positives = 23/58 (39%)
Frame = -3
Query: 437 KSRDANRYSTRYPCMEGHHWISGFQRGSTTRRHCSQNKRKTSSQYNRYIQHSRKYDGE 264
+ R+ N Y + G R T R + K +S+ YN Y ++ Y+ +
Sbjct: 276 REREQNSYKNEREYRKYRETSKGRSRDRTERERSKETKIISSNNYN-YKNYNNNYNSK 332
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 718 GSELGLQDRNIVYIQTDAPITFGNSGGP 635
G E+G++DR Y +T P G + GP
Sbjct: 386 GDEIGMEDRWFTYQETVDPA--GCNAGP 411
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 22.2 bits (45), Expect = 5.5
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -3
Query: 344 RHCSQNKRKTSSQYNRYIQHSRK 276
RH S++ + ++Q+N HS K
Sbjct: 433 RHSSKSDNQNNNQHNDQAHHSSK 455
Score = 21.4 bits (43), Expect = 9.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 760 NTVTAGVVSXTQRAGSELGLQDRNIVYIQTD 668
N +G V+ TQR L L DRN + D
Sbjct: 360 NVPQSGRVNNTQRNEYLLALSDRNQNVLNND 390
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 5.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 466 PSILMELKMRNPEMPTDIQHG 404
PS+ L+ NPE I+HG
Sbjct: 67 PSVYPLLRFENPETHHPIRHG 87
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 691 NIVYIQTDAPITFGNSGGP 635
N+VY + P+T GGP
Sbjct: 395 NVVYRPGENPVTQKREGGP 413
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 691 NIVYIQTDAPITFGNSGGP 635
N+VY + P+T GGP
Sbjct: 415 NVVYRPGENPVTQKREGGP 433
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 691 NIVYIQTDAPITFGNSGGP 635
N+VY + P+T GGP
Sbjct: 364 NVVYRPGENPVTQKREGGP 382
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,054
Number of Sequences: 438
Number of extensions: 5230
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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