Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc13d15
         (169 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ181928-1|ABA19229.1|  540|Homo sapiens CARDIF protein.               30   1.2  
DQ174270-1|AAZ80417.1|  540|Homo sapiens mitochondrial anti-vira...    30   1.2  
DQ167126-1|ABA54890.1|  540|Homo sapiens virus-induced signaling...    30   1.2  
BC044952-1|AAH44952.1|  540|Homo sapiens virus-induced signaling...    30   1.2  
AL353194-3|CAI11041.1|  540|Homo sapiens novel protein protein.        30   1.2  
AL109804-18|CAI18851.1|  540|Homo sapiens novel protein protein.       30   1.2  
AB232371-1|BAE79738.1|  540|Homo sapiens Ips-1 protein.                30   1.2  
AB097003-1|BAC77356.1|  540|Homo sapiens putative NFkB activatin...    30   1.2  
AB033097-1|BAA86585.1|  542|Homo sapiens KIAA1271 protein protein.     30   1.2  
AB058756-1|BAB47482.1|  708|Homo sapiens KIAA1853 protein protein.     27   8.3  

>DQ181928-1|ABA19229.1|  540|Homo sapiens CARDIF protein.
          Length = 540

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 165 TVALKLPVAPSTTEYVPTSISGSKKRKNSVPA 70
           TVALK+P  P++   VP+ +  S K   +VP+
Sbjct: 307 TVALKVPANPASVSTVPSKLPTSSKPPGAVPS 338


>DQ174270-1|AAZ80417.1|  540|Homo sapiens mitochondrial anti-viral
           signaling protein protein.
          Length = 540

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 165 TVALKLPVAPSTTEYVPTSISGSKKRKNSVPA 70
           TVALK+P  P++   VP+ +  S K   +VP+
Sbjct: 307 TVALKVPANPASVSTVPSKLPTSSKPPGAVPS 338


>DQ167126-1|ABA54890.1|  540|Homo sapiens virus-induced signaling
           adapter protein.
          Length = 540

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 165 TVALKLPVAPSTTEYVPTSISGSKKRKNSVPA 70
           TVALK+P  P++   VP+ +  S K   +VP+
Sbjct: 307 TVALKVPANPASVSTVPSKLPTSSKPPGAVPS 338


>BC044952-1|AAH44952.1|  540|Homo sapiens virus-induced signaling
           adapter protein.
          Length = 540

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 165 TVALKLPVAPSTTEYVPTSISGSKKRKNSVPA 70
           TVALK+P  P++   VP+ +  S K   +VP+
Sbjct: 307 TVALKVPANPASVSTVPSKLPTSSKPPGAVPS 338


>AL353194-3|CAI11041.1|  540|Homo sapiens novel protein protein.
          Length = 540

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 165 TVALKLPVAPSTTEYVPTSISGSKKRKNSVPA 70
           TVALK+P  P++   VP+ +  S K   +VP+
Sbjct: 307 TVALKVPANPASVSTVPSKLPTSSKPPGAVPS 338


>AL109804-18|CAI18851.1|  540|Homo sapiens novel protein protein.
          Length = 540

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 165 TVALKLPVAPSTTEYVPTSISGSKKRKNSVPA 70
           TVALK+P  P++   VP+ +  S K   +VP+
Sbjct: 307 TVALKVPANPASVSTVPSKLPTSSKPPGAVPS 338


>AB232371-1|BAE79738.1|  540|Homo sapiens Ips-1 protein.
          Length = 540

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 165 TVALKLPVAPSTTEYVPTSISGSKKRKNSVPA 70
           TVALK+P  P++   VP+ +  S K   +VP+
Sbjct: 307 TVALKVPANPASVSTVPSKLPTSSKPPGAVPS 338


>AB097003-1|BAC77356.1|  540|Homo sapiens putative NFkB activating
           protein protein.
          Length = 540

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 165 TVALKLPVAPSTTEYVPTSISGSKKRKNSVPA 70
           TVALK+P  P++   VP+ +  S K   +VP+
Sbjct: 307 TVALKVPANPASVSTVPSKLPTSSKPPGAVPS 338


>AB033097-1|BAA86585.1|  542|Homo sapiens KIAA1271 protein protein.
          Length = 542

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 165 TVALKLPVAPSTTEYVPTSISGSKKRKNSVPA 70
           TVALK+P  P++   VP+ +  S K   +VP+
Sbjct: 309 TVALKVPANPASVSTVPSKLPTSSKPPGAVPS 340


>AB058756-1|BAB47482.1|  708|Homo sapiens KIAA1853 protein protein.
          Length = 708

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/37 (27%), Positives = 23/37 (62%)
 Frame = -2

Query: 132 TTEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTTAAP 22
           ++ Y P+ +   KK+ +    ++RS  K RR+++++P
Sbjct: 220 SSSYSPSPVKKKKKKSSKKHKRRRSFSKKRRHSSSSP 256


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,525,711
Number of Sequences: 237096
Number of extensions: 338153
Number of successful extensions: 1070
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 76,859,062
effective HSP length: 35
effective length of database: 68,560,702
effective search space used: 1371214040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)