Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13d13
(640 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43737-1|AAA86272.2| 226|Drosophila melanogaster isoaspartyl me... 192 3e-49
U37432-1|AAA80540.2| 226|Drosophila melanogaster protein D-aspa... 192 3e-49
AY075527-1|AAL68334.1| 226|Drosophila melanogaster RE74472p pro... 192 3e-49
AY070630-1|AAL48101.1| 226|Drosophila melanogaster RE73839p pro... 192 3e-49
AE014297-269|AAF52012.1| 226|Drosophila melanogaster CG2152-PA ... 192 3e-49
BT021305-1|AAX33453.1| 297|Drosophila melanogaster RE17490p pro... 37 0.026
AY061573-1|AAL29121.1| 252|Drosophila melanogaster SD02225p pro... 37 0.026
AE014134-3346|AAF53967.3| 310|Drosophila melanogaster CG9249-PA... 37 0.026
AE014134-2885|AAF53636.3| 1912|Drosophila melanogaster CG7527-PA... 31 1.7
BT003167-1|AAO24922.1| 474|Drosophila melanogaster SD23052p pro... 28 9.3
AY051841-1|AAK93265.1| 516|Drosophila melanogaster LD34544p pro... 28 9.3
AE014297-4435|AAZ83991.1| 722|Drosophila melanogaster CG33956-P... 28 9.3
AE014297-1963|AAN13635.1| 474|Drosophila melanogaster CG6563-PB... 28 9.3
AE014297-1962|AAF55147.1| 516|Drosophila melanogaster CG6563-PA... 28 9.3
>U43737-1|AAA86272.2| 226|Drosophila melanogaster isoaspartyl
methyltransferase protein.
Length = 226
Score = 192 bits (468), Expect = 3e-49
Identities = 95/166 (57%), Positives = 117/166 (70%), Gaps = 5/166 (3%)
Frame = -1
Query: 634 TISAPHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETG-----RVVGIEHI 470
TISAPHMHA ALE L++ L PG + LDVGSGSGYLTAC + G R+VGIEH
Sbjct: 58 TISAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQ 117
Query: 469 SELVNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQ 290
+ELV + N+ D+ S+L S ++ +V GDGR GYP APY+AIHVGAAAP P LI+Q
Sbjct: 118 AELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTPTELINQ 177
Query: 289 LKPGGRLIVPVGPEGGEQHLTQVDKAQDGTTTVKKLMSVIYVPLTD 152
L GGRLIVPVGP+GG Q++ Q DK +G + +LM V+YVPLTD
Sbjct: 178 LASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPLTD 223
>U37432-1|AAA80540.2| 226|Drosophila melanogaster protein
D-aspartyl, L-isoaspartylmethyltransferase protein.
Length = 226
Score = 192 bits (468), Expect = 3e-49
Identities = 95/166 (57%), Positives = 117/166 (70%), Gaps = 5/166 (3%)
Frame = -1
Query: 634 TISAPHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETG-----RVVGIEHI 470
TISAPHMHA ALE L++ L PG + LDVGSGSGYLTAC + G R+VGIEH
Sbjct: 58 TISAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQ 117
Query: 469 SELVNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQ 290
+ELV + N+ D+ S+L S ++ +V GDGR GYP APY+AIHVGAAAP P LI+Q
Sbjct: 118 AELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTPTELINQ 177
Query: 289 LKPGGRLIVPVGPEGGEQHLTQVDKAQDGTTTVKKLMSVIYVPLTD 152
L GGRLIVPVGP+GG Q++ Q DK +G + +LM V+YVPLTD
Sbjct: 178 LASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPLTD 223
>AY075527-1|AAL68334.1| 226|Drosophila melanogaster RE74472p
protein.
Length = 226
Score = 192 bits (468), Expect = 3e-49
Identities = 95/166 (57%), Positives = 117/166 (70%), Gaps = 5/166 (3%)
Frame = -1
Query: 634 TISAPHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETG-----RVVGIEHI 470
TISAPHMHA ALE L++ L PG + LDVGSGSGYLTAC + G R+VGIEH
Sbjct: 58 TISAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQ 117
Query: 469 SELVNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQ 290
+ELV + N+ D+ S+L S ++ +V GDGR GYP APY+AIHVGAAAP P LI+Q
Sbjct: 118 AELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTPTELINQ 177
Query: 289 LKPGGRLIVPVGPEGGEQHLTQVDKAQDGTTTVKKLMSVIYVPLTD 152
L GGRLIVPVGP+GG Q++ Q DK +G + +LM V+YVPLTD
Sbjct: 178 LASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPLTD 223
>AY070630-1|AAL48101.1| 226|Drosophila melanogaster RE73839p
protein.
Length = 226
Score = 192 bits (468), Expect = 3e-49
Identities = 95/166 (57%), Positives = 117/166 (70%), Gaps = 5/166 (3%)
Frame = -1
Query: 634 TISAPHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETG-----RVVGIEHI 470
TISAPHMHA ALE L++ L PG + LDVGSGSGYLTAC + G R+VGIEH
Sbjct: 58 TISAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQ 117
Query: 469 SELVNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQ 290
+ELV + N+ D+ S+L S ++ +V GDGR GYP APY+AIHVGAAAP P LI+Q
Sbjct: 118 AELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTPTELINQ 177
Query: 289 LKPGGRLIVPVGPEGGEQHLTQVDKAQDGTTTVKKLMSVIYVPLTD 152
L GGRLIVPVGP+GG Q++ Q DK +G + +LM V+YVPLTD
Sbjct: 178 LASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPLTD 223
>AE014297-269|AAF52012.1| 226|Drosophila melanogaster CG2152-PA
protein.
Length = 226
Score = 192 bits (468), Expect = 3e-49
Identities = 95/166 (57%), Positives = 117/166 (70%), Gaps = 5/166 (3%)
Frame = -1
Query: 634 TISAPHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETG-----RVVGIEHI 470
TISAPHMHA ALE L++ L PG + LDVGSGSGYLTAC + G R+VGIEH
Sbjct: 58 TISAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQ 117
Query: 469 SELVNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQ 290
+ELV + N+ D+ S+L S ++ +V GDGR GYP APY+AIHVGAAAP P LI+Q
Sbjct: 118 AELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTPTELINQ 177
Query: 289 LKPGGRLIVPVGPEGGEQHLTQVDKAQDGTTTVKKLMSVIYVPLTD 152
L GGRLIVPVGP+GG Q++ Q DK +G + +LM V+YVPLTD
Sbjct: 178 LASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPLTD 223
>BT021305-1|AAX33453.1| 297|Drosophila melanogaster RE17490p
protein.
Length = 297
Score = 36.7 bits (81), Expect = 0.026
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Frame = -1
Query: 571 GEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQNDNPSLLSSERIKL 392
G+ L+VG G G LT +A LG +V GI+ +L+ A ++++ +P L S+ K+
Sbjct: 104 GQNILEVGCGGGLLTEHLA-RLG--AQVAGIDLGEKLIEAAREHLKCSSPELASNVVYKI 160
Query: 391 VVGDGRLGYPSEAPYSAIHVGAAAP------TLPQALIDQLKPGGRLIV 263
D E Y A+ V +L +A + LKPGG + +
Sbjct: 161 EPVDQHAKANCEC-YDAVIVSEVLEHVKDKVSLLEASVRSLKPGGSIFI 208
>AY061573-1|AAL29121.1| 252|Drosophila melanogaster SD02225p
protein.
Length = 252
Score = 36.7 bits (81), Expect = 0.026
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Frame = -1
Query: 571 GEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQNDNPSLLSSERIKL 392
G+ L+VG G G LT +A LG +V GI+ +L+ A ++++ +P L S+ K+
Sbjct: 38 GQNILEVGCGGGLLTEHLA-RLG--AQVTGIDLGEKLIEAAREHLKCSSPELASNVVYKI 94
Query: 391 VVGDGRLGYPSEAPYSAIHVGAAAP------TLPQALIDQLKPGGRLIV 263
D E Y A+ V +L +A + LKPGG + +
Sbjct: 95 EPVDQHAKANCEC-YDAVIVSEVLEHVKDKVSLLEASVRSLKPGGSIFI 142
>AE014134-3346|AAF53967.3| 310|Drosophila melanogaster CG9249-PA
protein.
Length = 310
Score = 36.7 bits (81), Expect = 0.026
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Frame = -1
Query: 571 GEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQNDNPSLLSSERIKL 392
G+ L+VG G G LT +A LG +V GI+ +L+ A ++++ +P L S+ K+
Sbjct: 96 GQNILEVGCGGGLLTEHLA-RLG--AQVAGIDLGEKLIEAAREHLKCSSPELASNVVYKI 152
Query: 391 VVGDGRLGYPSEAPYSAIHVGAAAP------TLPQALIDQLKPGGRLIV 263
D E Y A+ V +L +A + LKPGG + +
Sbjct: 153 EPVDQHAKANCEC-YDAVIVSEVLEHVKDKVSLLEASVRSLKPGGSIFI 200
>AE014134-2885|AAF53636.3| 1912|Drosophila melanogaster CG7527-PA,
isoform A protein.
Length = 1912
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 214 LYQPESNVVHHPQALQELLASLPVSIDQLELVVKWELQPRHELH-CKGLQMDNRD 375
+ + +S +H P+ + L LPV +D + E +P+ E+H K DNRD
Sbjct: 73 IIKKKSKTIHEPEVPIDFLMGLPVLLDS-DFSDSEECRPKSEIHVAKPETEDNRD 126
>BT003167-1|AAO24922.1| 474|Drosophila melanogaster SD23052p
protein.
Length = 474
Score = 28.3 bits (60), Expect = 9.3
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = -1
Query: 592 LKNQ-LVPGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQND 428
L+N+ +V G+ LDVG G+G L + A G RVVGI++ S++V A I+ +
Sbjct: 194 LQNEAVVRGKTVLDVGCGTGIL-SIFASKAG-AARVVGIDN-SDIVYTAMDIIRKN 246
>AY051841-1|AAK93265.1| 516|Drosophila melanogaster LD34544p
protein.
Length = 516
Score = 28.3 bits (60), Expect = 9.3
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = -1
Query: 592 LKNQ-LVPGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQND 428
L+N+ +V G+ LDVG G+G L + A G RVVGI++ S++V A I+ +
Sbjct: 236 LQNEAVVRGKTVLDVGCGTGIL-SIFASKAG-AARVVGIDN-SDIVYTAMDIIRKN 288
>AE014297-4435|AAZ83991.1| 722|Drosophila melanogaster CG33956-PD,
isoform D protein.
Length = 722
Score = 28.3 bits (60), Expect = 9.3
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 6/120 (5%)
Frame = -1
Query: 535 YLTACMAMMLG--ETGRVVGIEHISELVNLATKNIQNDNPSLLSSERIKLVVGDGRLGYP 362
Y + M LG ETG+ V L T+NI++ LLS + V G P
Sbjct: 193 YASLQMGRQLGNFETGQSVLTLTTPTLTPTTTRNIEDTLGHLLSDTQTDRVAGCAGFAVP 252
Query: 361 SEAPYSAIHVGAAAPTLPQALIDQLKPGGRLIVPVGPEGGEQHL----TQVDKAQDGTTT 194
P + +G PT +L L+ L + G E + + TQ+++ QD T T
Sbjct: 253 KVLPNAIDVLGMGIPTGVSSL--PLQQTFDLSLGQGSESEDSNASYNDTQMNEEQDTTDT 310
>AE014297-1963|AAN13635.1| 474|Drosophila melanogaster CG6563-PB,
isoform B protein.
Length = 474
Score = 28.3 bits (60), Expect = 9.3
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = -1
Query: 592 LKNQ-LVPGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQND 428
L+N+ +V G+ LDVG G+G L + A G RVVGI++ S++V A I+ +
Sbjct: 194 LQNEAVVRGKTVLDVGCGTGIL-SIFASKAG-AARVVGIDN-SDIVYTAMDIIRKN 246
>AE014297-1962|AAF55147.1| 516|Drosophila melanogaster CG6563-PA,
isoform A protein.
Length = 516
Score = 28.3 bits (60), Expect = 9.3
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = -1
Query: 592 LKNQ-LVPGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQND 428
L+N+ +V G+ LDVG G+G L + A G RVVGI++ S++V A I+ +
Sbjct: 236 LQNEAVVRGKTVLDVGCGTGIL-SIFASKAG-AARVVGIDN-SDIVYTAMDIIRKN 288
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,774,994
Number of Sequences: 53049
Number of extensions: 709145
Number of successful extensions: 2286
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2281
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -