Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13d13
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U15129-1|AAB60240.1| 225|Caenorhabditis elegans protein-L-isoas... 186 2e-47
U09669-1|AAA82166.1| 225|Caenorhabditis elegans protein-L-isoas... 186 2e-47
AF022968-2|AAB69887.1| 225|Caenorhabditis elegans Protein carbo... 186 2e-47
AF022968-1|ABR92613.1| 219|Caenorhabditis elegans Protein carbo... 169 1e-42
AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical ... 40 0.002
AL023828-21|CAA19466.1| 381|Caenorhabditis elegans Hypothetical... 34 0.075
AL023828-20|CAA19465.1| 378|Caenorhabditis elegans Hypothetical... 34 0.075
Z66519-4|CAA91373.1| 210|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z66500-9|CAA91307.1| 672|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z69718-3|CAA93538.1| 365|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z46241-7|CAA86320.1| 214|Caenorhabditis elegans Hypothetical pr... 30 1.2
U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z75554-4|CAA99957.2| 534|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF125959-4|AAD14730.2| 532|Caenorhabditis elegans Udp-glucurono... 29 2.8
AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical ... 29 2.8
U80030-12|AAG24159.1| 391|Caenorhabditis elegans Hypothetical p... 29 3.7
Z79603-8|CAH04750.1| 137|Caenorhabditis elegans Hypothetical pr... 28 4.9
U97009-13|AAZ94736.1| 456|Caenorhabditis elegans Udp-glucuronos... 28 4.9
U97009-12|ABR92602.1| 532|Caenorhabditis elegans Udp-glucuronos... 28 4.9
U97009-11|AAC69026.1| 533|Caenorhabditis elegans Udp-glucuronos... 28 4.9
U97009-10|AAC69033.1| 533|Caenorhabditis elegans Udp-glucuronos... 28 4.9
U41264-1|AAA82421.1| 929|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical... 28 4.9
U97009-8|AAC69032.1| 534|Caenorhabditis elegans Udp-glucuronosy... 28 6.5
U42833-1|AAA83575.1| 724|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF125959-1|AAD14733.1| 475|Caenorhabditis elegans Hypothetical ... 28 6.5
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z75955-9|CAB00123.1| 406|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z75532-3|CAA99810.1| 660|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z71177-4|CAA94870.1| 529|Caenorhabditis elegans Hypothetical pr... 27 8.6
CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical... 27 8.6
CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical... 27 8.6
>U15129-1|AAB60240.1| 225|Caenorhabditis elegans
protein-L-isoaspartate (D-aspartate)O-methyltransferase
protein.
Length = 225
Score = 186 bits (452), Expect = 2e-47
Identities = 91/168 (54%), Positives = 118/168 (70%)
Frame = -1
Query: 640 SATISAPHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISEL 461
+AT+SAPHMHA AL+ L+N LV G KALDVGSGSGYLT CMAMM+G G VVGIEH+ +L
Sbjct: 56 NATVSAPHMHAAALDYLQNHLVAGAKALDVGSGSGYLTVCMAMMVGRNGTVVGIEHMPQL 115
Query: 460 VNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQLKP 281
V L+ KNI+ + L + ++ GDGR G+ +APY+AIHVGAA+ +P+AL DQL
Sbjct: 116 VELSEKNIRKHHSEQLERGNVIIIEGDGRQGFAEKAPYNAIHVGAASKGVPKALTDQLAE 175
Query: 280 GGRLIVPVGPEGGEQHLTQVDKAQDGTTTVKKLMSVIYVPLTDKEHQY 137
GGR+++PV G Q Q+DK +G K + VIYVPLT +E Q+
Sbjct: 176 GGRMMIPVEQVDGNQVFMQIDKI-NGKIEQKIVEHVIYVPLTSREEQW 222
>U09669-1|AAA82166.1| 225|Caenorhabditis elegans
protein-L-isoaspartate (D-aspartate)O-methyltransferase
protein.
Length = 225
Score = 186 bits (452), Expect = 2e-47
Identities = 91/168 (54%), Positives = 118/168 (70%)
Frame = -1
Query: 640 SATISAPHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISEL 461
+AT+SAPHMHA AL+ L+N LV G KALDVGSGSGYLT CMAMM+G G VVGIEH+ +L
Sbjct: 56 NATVSAPHMHAAALDYLQNHLVAGAKALDVGSGSGYLTVCMAMMVGRNGTVVGIEHMPQL 115
Query: 460 VNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQLKP 281
V L+ KNI+ + L + ++ GDGR G+ +APY+AIHVGAA+ +P+AL DQL
Sbjct: 116 VELSEKNIRKHHSEQLERGNVIIIEGDGRQGFAEKAPYNAIHVGAASKGVPKALTDQLAE 175
Query: 280 GGRLIVPVGPEGGEQHLTQVDKAQDGTTTVKKLMSVIYVPLTDKEHQY 137
GGR+++PV G Q Q+DK +G K + VIYVPLT +E Q+
Sbjct: 176 GGRMMIPVEQVDGNQVFMQIDKI-NGKIEQKIVEHVIYVPLTSREEQW 222
>AF022968-2|AAB69887.1| 225|Caenorhabditis elegans Protein
carboxymethyltransferaseprotein 1, isoform a protein.
Length = 225
Score = 186 bits (452), Expect = 2e-47
Identities = 91/168 (54%), Positives = 118/168 (70%)
Frame = -1
Query: 640 SATISAPHMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISEL 461
+AT+SAPHMHA AL+ L+N LV G KALDVGSGSGYLT CMAMM+G G VVGIEH+ +L
Sbjct: 56 NATVSAPHMHAAALDYLQNHLVAGAKALDVGSGSGYLTVCMAMMVGRNGTVVGIEHMPQL 115
Query: 460 VNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQLKP 281
V L+ KNI+ + L + ++ GDGR G+ +APY+AIHVGAA+ +P+AL DQL
Sbjct: 116 VELSEKNIRKHHSEQLERGNVIIIEGDGRQGFAEKAPYNAIHVGAASKGVPKALTDQLAE 175
Query: 280 GGRLIVPVGPEGGEQHLTQVDKAQDGTTTVKKLMSVIYVPLTDKEHQY 137
GGR+++PV G Q Q+DK +G K + VIYVPLT +E Q+
Sbjct: 176 GGRMMIPVEQVDGNQVFMQIDKI-NGKIEQKIVEHVIYVPLTSREEQW 222
>AF022968-1|ABR92613.1| 219|Caenorhabditis elegans Protein
carboxymethyltransferaseprotein 1, isoform b protein.
Length = 219
Score = 169 bits (411), Expect = 1e-42
Identities = 84/159 (52%), Positives = 109/159 (68%)
Frame = -1
Query: 613 HAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQ 434
HA AL+ L+N LV G KALDVGSGSGYLT CMAMM+G G VVGIEH+ +LV L+ KNI+
Sbjct: 59 HAAALDYLQNHLVAGAKALDVGSGSGYLTVCMAMMVGRNGTVVGIEHMPQLVELSEKNIR 118
Query: 433 NDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQLKPGGRLIVPVG 254
+ L + ++ GDGR G+ +APY+AIHVGAA+ +P+AL DQL GGR+++PV
Sbjct: 119 KHHSEQLERGNVIIIEGDGRQGFAEKAPYNAIHVGAASKGVPKALTDQLAEGGRMMIPVE 178
Query: 253 PEGGEQHLTQVDKAQDGTTTVKKLMSVIYVPLTDKEHQY 137
G Q Q+DK +G K + VIYVPLT +E Q+
Sbjct: 179 QVDGNQVFMQIDKI-NGKIEQKIVEHVIYVPLTSREEQW 216
>AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical
protein R119.5 protein.
Length = 659
Score = 39.5 bits (88), Expect = 0.002
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Frame = -1
Query: 571 GEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQN--DNPSLLS---- 410
G L +G+GSGYL+ ++LGETG GIE LV + I P S
Sbjct: 86 GHSFLHIGTGSGYLSTIAGILLGETGINHGIELYENLVTYSETCIDQWITTPEASSVGWA 145
Query: 409 SERIKLV-VGDGRLGYPSEAPYSAIHVGAAA--PTLPQALIDQLKPGGRLIVP 260
+K+ + D + + Y I VG A L + ++ L GG+L++P
Sbjct: 146 RPELKVCDITDVKFLEAHQNRYDRIFVGFVADDSQLLKRMLGMLNVGGQLVMP 198
>AL023828-21|CAA19466.1| 381|Caenorhabditis elegans Hypothetical
protein Y17G7B.18b protein.
Length = 381
Score = 34.3 bits (75), Expect = 0.075
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = -1
Query: 568 EKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQN--DNPSLLSSE-RI 398
++ALD+G +G+LT +A R++GI+ L+ +A KNI++ D+ + +S +
Sbjct: 153 KQALDIGCNAGFLTLSIAKDFSPR-RIIGIDIDEHLIGVARKNIRHYCDHETEVSGKFPA 211
Query: 397 KLVVGDGRLGYPSEAPYS 344
V G + +EAP S
Sbjct: 212 SFGVQFGTVSQRNEAPRS 229
>AL023828-20|CAA19465.1| 378|Caenorhabditis elegans Hypothetical
protein Y17G7B.18a protein.
Length = 378
Score = 34.3 bits (75), Expect = 0.075
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = -1
Query: 568 EKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQN--DNPSLLSSE-RI 398
++ALD+G +G+LT +A R++GI+ L+ +A KNI++ D+ + +S +
Sbjct: 150 KQALDIGCNAGFLTLSIAKDFSPR-RIIGIDIDEHLIGVARKNIRHYCDHETEVSGKFPA 208
Query: 397 KLVVGDGRLGYPSEAPYS 344
V G + +EAP S
Sbjct: 209 SFGVQFGTVSQRNEAPRS 226
>Z66519-4|CAA91373.1| 210|Caenorhabditis elegans Hypothetical
protein B0334.4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 0.70
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 178 SSISLQLLFHPVLYQP-ESNVVHHPQALQELLASLPVSID 294
S ISL L +Y+ E N HHP L ++L S+ VSID
Sbjct: 102 SHISLFQLHERCIYKSSEDNQQHHPALLTDVLRSVTVSID 141
>Z66500-9|CAA91307.1| 672|Caenorhabditis elegans Hypothetical
protein T05C12.6a protein.
Length = 672
Score = 31.1 bits (67), Expect = 0.70
Identities = 23/80 (28%), Positives = 34/80 (42%)
Frame = -1
Query: 532 LTACMAMMLGETGRVVGIEHISELVNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEA 353
+T A M+GE+ +G+ + TKN P+ L G G LG P
Sbjct: 577 MTNDYASMVGESQ--IGMNPVGNYHVFGTKNNHRQVPAPSQVTSSSLTNGSGGLGGPPPT 634
Query: 352 PYSAIHVGAAAPTLPQALID 293
P S+ V AA+P Q ++
Sbjct: 635 PLSSTMVLAASPIQSQNAVN 654
>Z69718-3|CAA93538.1| 365|Caenorhabditis elegans Hypothetical
protein W06D11.4 protein.
Length = 365
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 616 MHAHALEKLKNQLV--PGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATK 443
+H + +QL P + +D+GSG G+L +A T VG+E + L +A K
Sbjct: 172 LHCSQMASFVDQLNMGPSDYFMDLGSGIGHLVNFVA-AYARTQMSVGVELMDNLAEIAEK 230
Query: 442 N 440
N
Sbjct: 231 N 231
>Z46241-7|CAA86320.1| 214|Caenorhabditis elegans Hypothetical
protein C38D4.9 protein.
Length = 214
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -1
Query: 571 GEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQ 434
G+K +D+G G G L A M E V+G++ E + + ++N++
Sbjct: 48 GKKLIDIGCGCGMLMTTAATMY-ELETVLGVDIDDEALKICSRNLE 92
>U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical protein
F59A3.1 protein.
Length = 1014
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/95 (25%), Positives = 39/95 (41%)
Frame = -1
Query: 457 NLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTLPQALIDQLKPG 278
N+A+ ++ ++N + + I+ G +G S H+ P L L P
Sbjct: 853 NMASGHLYSENQRAIKTALIERSRGVRIIGGTDGMSVSVDHMHKRLPLLGGRRFVPL-PN 911
Query: 277 GRLIVPVGPEGGEQHLTQVDKAQDGTTTVKKLMSV 173
G +V V GG+ H D T TV+K + V
Sbjct: 912 GEHLVKVRTPGGQMHAQFAVVISDRTPTVEKFVGV 946
>Z75554-4|CAA99957.2| 534|Caenorhabditis elegans Hypothetical
protein ZC455.6a protein.
Length = 534
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = -1
Query: 478 EHISELVNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSA 341
E+I + V+L+T Q SLL+ +R+KL + G LG E YSA
Sbjct: 351 ENIPDNVHLSTWFPQQ---SLLADKRVKLFITHGGLGSTMELAYSA 393
>AF125959-4|AAD14730.2| 532|Caenorhabditis elegans
Udp-glucuronosyltransferase protein13 protein.
Length = 532
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 424 PSLLSSERIKLVVGDGRLGYPSEAPYS 344
PSLL+ +R+KL V G LG +E Y+
Sbjct: 364 PSLLADKRVKLFVTHGGLGSTTEVAYT 390
>AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical
protein C18H7.9 protein.
Length = 144
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -1
Query: 619 HMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELV 458
H+ LEKL + +K LD+G G+G L + + G +VVG ++ E++
Sbjct: 22 HLVLPTLEKLLKYNLKDKKVLDIGCGNG-LNSTTFLQWG-ARKVVGFDNSQEMI 73
>U80030-12|AAG24159.1| 391|Caenorhabditis elegans Hypothetical
protein K12D9.1 protein.
Length = 391
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = -1
Query: 571 GEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQNDNPSLLSSERIKL 392
G + LDVG G G+ + +A ++ + VG++ + + A N ++D + ++
Sbjct: 203 GFRVLDVGCGEGFHSCLLAENYSKS-QFVGLDICEKAIKSAKLNKKSDGSDF---QNLEF 258
Query: 391 VVGDGRL 371
VVGD +
Sbjct: 259 VVGDAMI 265
>Z79603-8|CAH04750.1| 137|Caenorhabditis elegans Hypothetical
protein M163.8 protein.
Length = 137
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 353 PLQCNSCRGCSSHFTTSSN*SIETGREANSSC 258
P C C G SS ++S++ S T ++NS+C
Sbjct: 52 PASCRLCSGASSTTSSSASSSSSTCGDSNSNC 83
>U97009-13|AAZ94736.1| 456|Caenorhabditis elegans
Udp-glucuronosyltransferase protein10 protein.
Length = 456
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 424 PSLLSSERIKLVVGDGRLGYPSEAPYS 344
PSLL+ +R+KL V G LG E Y+
Sbjct: 286 PSLLADKRVKLFVTHGGLGSTMEVAYT 312
>U97009-12|ABR92602.1| 532|Caenorhabditis elegans
Udp-glucuronosyltransferase protein9, isoform b protein.
Length = 532
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 424 PSLLSSERIKLVVGDGRLGYPSEAPYS 344
PSLL+ +R+KL V G LG E Y+
Sbjct: 364 PSLLADKRVKLFVTHGGLGSTMEVAYT 390
>U97009-11|AAC69026.1| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein9, isoform a protein.
Length = 533
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 424 PSLLSSERIKLVVGDGRLGYPSEAPYS 344
PSLL+ +R+KL V G LG E Y+
Sbjct: 365 PSLLADKRVKLFVTHGGLGSTMEVAYT 391
>U97009-10|AAC69033.1| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein11 protein.
Length = 533
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 424 PSLLSSERIKLVVGDGRLGYPSEAPYS 344
PSLL+ +R+KL V G LG E Y+
Sbjct: 365 PSLLADKRVKLFVTHGGLGSTMEVAYT 391
>U41264-1|AAA82421.1| 929|Caenorhabditis elegans Hypothetical
protein F10E7.8 protein.
Length = 929
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 137 ILVLLVS*WNINHTHQFLYSCCSILCFIN 223
IL+LLV + +NH +QF Y C I+ ++N
Sbjct: 634 ILLLLVKHFKLNHIYQFEYICQQIV-YVN 661
>AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical
protein C23H5.1 protein.
Length = 252
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/65 (20%), Positives = 33/65 (50%)
Frame = -1
Query: 619 HMHAHALEKLKNQLVPGEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKN 440
H+ ++K ++ G++ LDVG G+G+ + + +V G+++ E++ + +
Sbjct: 21 HLITPTIKKAFGHILVGKEVLDVGCGNGHYS--FDFLRWGAHKVFGVDNSEEMIQICKSS 78
Query: 439 IQNDN 425
+N
Sbjct: 79 PDFEN 83
>U97009-8|AAC69032.1| 534|Caenorhabditis elegans
Udp-glucuronosyltransferase protein12 protein.
Length = 534
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 424 PSLLSSERIKLVVGDGRLGYPSEAPYS 344
PSLL+ +R+KL + G LG E Y+
Sbjct: 366 PSLLADKRVKLFITHGGLGSTMEVAYT 392
>U42833-1|AAA83575.1| 724|Caenorhabditis elegans Hypothetical
protein ZK430.8 protein.
Length = 724
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 228 VKCCSPPSGPTGTISLPPGFN*SIRACGKV 317
V+ + SGPT TI++PP S+ +C +V
Sbjct: 99 VQTTTQSSGPTTTITIPPSSLTSVTSCERV 128
>AF125959-1|AAD14733.1| 475|Caenorhabditis elegans Hypothetical
protein H23N18.4 protein.
Length = 475
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 424 PSLLSSERIKLVVGDGRLGYPSEAPYS 344
PSLL+ +R+KL V G LG E Y+
Sbjct: 365 PSLLADKRLKLFVTHGGLGSTMEVAYT 391
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical
protein H08M01.2b protein.
Length = 1341
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 481 IEHISELVNLATKNIQNDNPSLLSSERIKLV 389
++ I+ N +I+ND PS+LSS I+L+
Sbjct: 821 VQPITSNANSEIDSIENDRPSILSSSGIQLL 851
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical
protein H08M01.2a protein.
Length = 1320
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 481 IEHISELVNLATKNIQNDNPSLLSSERIKLV 389
++ I+ N +I+ND PS+LSS I+L+
Sbjct: 821 VQPITSNANSEIDSIENDRPSILSSSGIQLL 851
>Z75955-9|CAB00123.1| 406|Caenorhabditis elegans Hypothetical
protein R07B7.14 protein.
Length = 406
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 150 RSTNIVLGDKCLSDHKI 100
R N GDKCL DHKI
Sbjct: 68 RLPNCKFGDKCLEDHKI 84
>Z75532-3|CAA99810.1| 660|Caenorhabditis elegans Hypothetical
protein C54G10.3 protein.
Length = 660
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -1
Query: 640 SATISAPHMHAHALEKLKN-QLVPGEKALDVG-SGSG 536
SAT+S P+ H+H + +L + Q++ G+ L G SG G
Sbjct: 426 SATLSPPNDHSHLIVQLLSLQIIQGQTLLITGDSGCG 462
>Z71177-4|CAA94870.1| 529|Caenorhabditis elegans Hypothetical
protein AC3.7 protein.
Length = 529
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 478 EHISELVNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYS 344
+ I L N A P+LL+ R+KL V G LG E YS
Sbjct: 343 QFIERLPNNAILKKWVPQPALLADPRLKLFVTHGGLGSTLEVAYS 387
>CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical
protein C42C1.13b protein.
Length = 206
Score = 27.5 bits (58), Expect = 8.6
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = -1
Query: 571 GEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQNDNPSLLSSERIKL 392
G+K L++GSG+G +A + G V I + E + L KN++ + L+ RIK+
Sbjct: 54 GKKVLELGSGTGVGGIALAAL----GADVIITDLPERLALIEKNVEANRK--LTGNRIKV 107
Query: 391 VVGD 380
V D
Sbjct: 108 QVLD 111
>CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical
protein C42C1.13a protein.
Length = 167
Score = 27.5 bits (58), Expect = 8.6
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = -1
Query: 571 GEKALDVGSGSGYLTACMAMMLGETGRVVGIEHISELVNLATKNIQNDNPSLLSSERIKL 392
G+K L++GSG+G +A + G V I + E + L KN++ + L+ RIK+
Sbjct: 15 GKKVLELGSGTGVGGIALAAL----GADVIITDLPERLALIEKNVEANRK--LTGNRIKV 68
Query: 391 VVGD 380
V D
Sbjct: 69 QVLD 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,614,077
Number of Sequences: 27780
Number of extensions: 358937
Number of successful extensions: 1025
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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