Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13d10
(725 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41449 Cluster: Uncharacterized 15.0 kDa protein in GTA... 238 1e-61
UniRef50_P41448 Cluster: Uncharacterized 8.8 kDa protein in GTA-... 134 2e-30
UniRef50_O10304 Cluster: Uncharacterized 13.0 kDa protein; n=6; ... 101 1e-20
UniRef50_O10303 Cluster: Uncharacterized 7.1 kDa protein; n=4; N... 87 4e-16
UniRef50_Q91GL1 Cluster: Putative uncharacterized protein; n=3; ... 81 4e-14
UniRef50_P41447 Cluster: Probable global transactivator; n=11; N... 52 2e-05
UniRef50_Q287E8 Cluster: ORF-124; n=5; Nucleopolyhedrovirus|Rep:... 48 2e-04
UniRef50_Q0E586 Cluster: 64.2 kDa Inhibitor of apoptosis/RING-fi... 42 0.016
UniRef50_Q0N467 Cluster: Ac43-like protein; n=1; Clanis bilineat... 41 0.036
UniRef50_Q99H10 Cluster: ORF37; n=3; Nucleopolyhedrovirus|Rep: O... 40 0.063
UniRef50_Q06VS5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.19
UniRef50_Q4KT45 Cluster: ORF-35 peptide; n=2; Nucleopolyhedrovir... 38 0.25
UniRef50_A4KX77 Cluster: Putative uncharacterized protein; n=1; ... 38 0.25
UniRef50_A0EYT3 Cluster: Putative uncharacterized protein; n=1; ... 38 0.33
UniRef50_Q9LFY4 Cluster: T7N9.7; n=1; Arabidopsis thaliana|Rep: ... 38 0.33
UniRef50_A0CS68 Cluster: Chromosome undetermined scaffold_26, wh... 37 0.44
UniRef50_A7PCG7 Cluster: Chromosome chr2 scaffold_11, whole geno... 36 0.77
UniRef50_A1SBG7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.0
UniRef50_Q06VJ9 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_Q969V5 Cluster: RING finger protein C1orf166; n=22; Eut... 35 1.8
UniRef50_A2G3U3 Cluster: Ankyrin repeat protein, putative; n=3; ... 35 2.4
UniRef50_Q0EZJ0 Cluster: Histidyl-tRNA synthetase; n=1; Mariprof... 34 3.1
UniRef50_Q1RPW2 Cluster: Zinc finger protein; n=1; Ciona intesti... 34 4.1
UniRef50_Q2II02 Cluster: Histidyl-tRNA synthetase; n=1; Anaeromy... 33 5.4
UniRef50_A5C2T9 Cluster: Putative uncharacterized protein; n=1; ... 33 5.4
UniRef50_Q54HN7 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_A2X0I0 Cluster: Putative uncharacterized protein; n=3; ... 33 9.5
>UniRef50_P41449 Cluster: Uncharacterized 15.0 kDa protein in
GTA-P79 intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 15.0 kDa
protein in GTA-P79 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 131
Score = 238 bits (582), Expect = 1e-61
Identities = 107/109 (98%), Positives = 108/109 (99%)
Frame = -2
Query: 367 MHDGRVKTQALRVLARSLPPLYDSTVDRHGCKVFTVRRYNRRVIDFAGIRNKTLEIIKTD 188
MHDGRVKTQALRVLARSLPPLYDSTVDRHGCKVFTVRRYNRRVIDFAGIRNKTLEIIKTD
Sbjct: 1 MHDGRVKTQALRVLARSLPPLYDSTVDRHGCKVFTVRRYNRRVIDFAGIRNKTLEIIKTD 60
Query: 187 RNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETV 41
RNLPLNTECNVK VDSACMRCR+SFAVYPAVTYLHCGHSCLCTDCDETV
Sbjct: 61 RNLPLNTECNVKVVDSACMRCRKSFAVYPAVTYLHCGHSCLCTDCDETV 109
>UniRef50_P41448 Cluster: Uncharacterized 8.8 kDa protein in GTA-P79
intergenic region; n=5; Nucleopolyhedrovirus|Rep:
Uncharacterized 8.8 kDa protein in GTA-P79 intergenic
region - Autographa californica nuclear polyhedrosis
virus (AcMNPV)
Length = 77
Score = 134 bits (325), Expect = 2e-30
Identities = 61/67 (91%), Positives = 65/67 (97%)
Frame = -1
Query: 584 MNTRYATCYVCDELVYLFKKTFSNMSPSAAAFYQQRMAIVKNGIVLCVRCSSKLKITNGI 405
MNTRYATCYVCDELVYLFKKTFSNMSPSAAAFYQ+RMAIVKNGIVLC RCSS+LKI NG+
Sbjct: 1 MNTRYATCYVCDELVYLFKKTFSNMSPSAAAFYQRRMAIVKNGIVLCPRCSSELKIGNGV 60
Query: 404 SIPIYPN 384
SIPIYP+
Sbjct: 61 SIPIYPH 67
>UniRef50_O10304 Cluster: Uncharacterized 13.0 kDa protein; n=6;
Nucleopolyhedrovirus|Rep: Uncharacterized 13.0 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 120
Score = 101 bits (243), Expect = 1e-20
Identities = 45/79 (56%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Frame = -2
Query: 280 GCKVFTVRRYNRRVIDFAGIRNKTLEIIK-TDRNLPLNTECNVKAVDSACMRCRRSFAVY 104
GC FTVRRYNR V+ F+GIR + LE ++ R LP +T+C + V +AC RCRRS +
Sbjct: 21 GCVAFTVRRYNRHVVGFSGIRARMLEKLRDAGRLLPADTKCALHTVPAACARCRRSLTLT 80
Query: 103 PAVTYLHCGHSCLCTDCDE 47
PAV+ L CGHSCLCTDCD+
Sbjct: 81 PAVSCLPCGHSCLCTDCDQ 99
>UniRef50_O10303 Cluster: Uncharacterized 7.1 kDa protein; n=4;
Nucleopolyhedrovirus|Rep: Uncharacterized 7.1 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 63
Score = 87.0 bits (206), Expect = 4e-16
Identities = 38/54 (70%), Positives = 45/54 (83%)
Frame = -1
Query: 584 MNTRYATCYVCDELVYLFKKTFSNMSPSAAAFYQQRMAIVKNGIVLCVRCSSKL 423
MN +YATCY+CDELVYLFKK F+ S SAAA Y++RMAIV+ G+VLC RCSS L
Sbjct: 1 MNAQYATCYLCDELVYLFKKQFARTSASAAALYRKRMAIVRRGVVLCQRCSSAL 54
>UniRef50_Q91GL1 Cluster: Putative uncharacterized protein; n=3;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Epiphyas postvittana nucleopolyhedrovirus
(EppoMNPV)
Length = 75
Score = 80.6 bits (190), Expect = 4e-14
Identities = 35/67 (52%), Positives = 50/67 (74%)
Frame = -1
Query: 626 KTLKNFSTCSW*VAMNTRYATCYVCDELVYLFKKTFSNMSPSAAAFYQQRMAIVKNGIVL 447
+ LKNF C+ ++MN YA CY+C+ LVYLFKK F+ S AA+FY++ MAIV+ G+VL
Sbjct: 2 RILKNFLVCN--LSMNAHYANCYLCNILVYLFKKQFAKTSAVAASFYRKHMAIVRGGVVL 59
Query: 446 CVRCSSK 426
C RC+++
Sbjct: 60 CQRCNAE 66
>UniRef50_P41447 Cluster: Probable global transactivator; n=11;
Nucleopolyhedrovirus|Rep: Probable global transactivator
- Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 506
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = -3
Query: 696 LNNAKTKRXAFVNTVFEETXINYEDIKKFFNL 601
+ + K+ AFVNTVFEET +NYEDIKKFFNL
Sbjct: 475 IKQRQDKKIAFVNTVFEETLLNYEDIKKFFNL 506
Score = 38.7 bits (86), Expect = 0.14
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -2
Query: 724 VEDNSIEKYIKQRQDKK 674
VEDNSIEKYIKQRQDKK
Sbjct: 466 VEDNSIEKYIKQRQDKK 482
>UniRef50_Q287E8 Cluster: ORF-124; n=5; Nucleopolyhedrovirus|Rep:
ORF-124 - Agrotis segetum nuclear polyhedrosis virus
(AsNPV)
Length = 68
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/59 (42%), Positives = 36/59 (61%)
Frame = -1
Query: 575 RYATCYVCDELVYLFKKTFSNMSPSAAAFYQQRMAIVKNGIVLCVRCSSKLKITNGISI 399
+YA CY+C+E VYLFKK +SN PS F+ + A+VK V C+ C + + I+I
Sbjct: 6 KYAKCYLCEETVYLFKK-YSN-KPS-DNFFNKYRAVVKKNYVYCILCYKDVFVNKYITI 61
>UniRef50_Q0E586 Cluster: 64.2 kDa Inhibitor of
apoptosis/RING-finger profile; n=2; dsDNA viruses, no
RNA stage|Rep: 64.2 kDa Inhibitor of
apoptosis/RING-finger profile - Spodoptera frugiperda
ascovirus 1a
Length = 567
Score = 41.9 bits (94), Expect = 0.016
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = -2
Query: 250 NRRVIDFAGIRNKTLEIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHS 71
N+++ D + R+ + +++ N + V C++C + +VTY CGHS
Sbjct: 467 NKKLADCSRTRSTAIAVLEKRYNTMVVCSDKVSKPARECIKCSEFMQNWRSVTYGTCGHS 526
Query: 70 CLCTDCDE 47
+C CDE
Sbjct: 527 VVCVSCDE 534
>UniRef50_Q0N467 Cluster: Ac43-like protein; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: Ac43-like protein - Clanis
bilineata nucleopolyhedrosis virus
Length = 70
Score = 40.7 bits (91), Expect = 0.036
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -1
Query: 584 MNTRYATCYVCDELVYLFKKTFSNMSPSAAAFYQQRMAIVKNGIVLCVRC 435
M +Y CY+C E++YL+KK + + +F+ +R I +N C C
Sbjct: 1 MQNQYTCCYICGEMLYLYKKYHKRQASN--SFFDKRRVIKRNMRCFCTTC 48
>UniRef50_Q99H10 Cluster: ORF37; n=3; Nucleopolyhedrovirus|Rep:
ORF37 - Helicoverpa zea SNPV
Length = 80
Score = 39.9 bits (89), Expect = 0.063
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -1
Query: 572 YATCYVCDELVYLFKKTFSNMSPSAAA---FYQQRMAIVKNGIVLCVRC 435
YATC+VCD+ +Y+++K + + +A F+ I KN C +C
Sbjct: 11 YATCFVCDDTIYVYRKCSALKNDAARVAQKFFSSHQGIKKNNTFFCHKC 59
>UniRef50_Q06VS5 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni ascovirus 2c|Rep: Putative
uncharacterized protein - Trichoplusia ni ascovirus 2c
Length = 598
Score = 38.3 bits (85), Expect = 0.19
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 148 VDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCD 50
++S C C R + VTY +CGHS +C CD
Sbjct: 541 IESTCRICHRPKEPWSHVTYFYCGHSAVCKLCD 573
>UniRef50_Q4KT45 Cluster: ORF-35 peptide; n=2;
Nucleopolyhedrovirus|Rep: ORF-35 peptide - Chrysodeixis
chalcites nucleopolyhedrovirus
Length = 62
Score = 37.9 bits (84), Expect = 0.25
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = -1
Query: 584 MNTRYATCYVCDELVYLFKKTFSNMSPSAAAFYQQRMAIVKNGIVLCVRC 435
M T+Y+ C +C +VY++KK ++S S F+ R KN LC +C
Sbjct: 6 MKTQYSNCIICKGMVYVYKKYTQSLS-SQIFFHNYRAIYRKNIGYLCGKC 54
>UniRef50_A4KX77 Cluster: Putative uncharacterized protein; n=1;
Heliothis virescens ascovirus 3e|Rep: Putative
uncharacterized protein - Heliothis virescens ascovirus
3e
Length = 646
Score = 37.9 bits (84), Expect = 0.25
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = -2
Query: 244 RVIDFAGIRNKTLEIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCL 65
+++D + R + L I R N+K + C C++ + VTY +CGHS +
Sbjct: 550 KLVDCSRTRQQPLRAISKYRAELEGVADNIKKPEFRCRMCKKD-GRWKNVTYGNCGHSVI 608
Query: 64 CTDCD 50
C CD
Sbjct: 609 CGQCD 613
>UniRef50_A0EYT3 Cluster: Putative uncharacterized protein; n=1;
Ecotropis obliqua NPV|Rep: Putative uncharacterized
protein - Ecotropis obliqua NPV
Length = 61
Score = 37.5 bits (83), Expect = 0.33
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = -1
Query: 584 MNTRYATCYVCDELVYLFKKTFSNMSPSAAAFYQQRMAIVKNGIVLCVRC 435
M RY TC +C +YL+KK +SN + F+ + I KN + C++C
Sbjct: 1 MKNRYTTCTMCKINIYLYKK-YSN-KIAVDIFFNKYRGINKNNKIYCLQC 48
>UniRef50_Q9LFY4 Cluster: T7N9.7; n=1; Arabidopsis thaliana|Rep:
T7N9.7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 125
Score = 37.5 bits (83), Expect = 0.33
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Frame = -2
Query: 241 VIDFAGIRNKTL----EIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYL-HCG 77
++ F R KT EI+K+ L + EC V+ +S C+ C + V V L HCG
Sbjct: 28 IVGFLKFRQKTKPLKKEILKSLPKLTFSQECGVRLCNSRCVICLEDYMVSDIVRVLPHCG 87
Query: 76 HS--CLCTD 56
H C D
Sbjct: 88 HQFHAFCID 96
>UniRef50_A0CS68 Cluster: Chromosome undetermined scaffold_26, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_26,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 247
Score = 37.1 bits (82), Expect = 0.44
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = -2
Query: 235 DFAGIRNKTLEIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTD 56
+F I+ +++KT + + L + ++ + CM+ S + P CGH C+C D
Sbjct: 170 NFEDIKKIENQLVKTLKQISLYKDSMIQKICVICMQKEYSMIMSP------CGHICVCED 223
Query: 55 CDETVXRGPI 26
C + + PI
Sbjct: 224 CSKQINHCPI 233
>UniRef50_A7PCG7 Cluster: Chromosome chr2 scaffold_11, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_11, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 221
Score = 36.3 bits (80), Expect = 0.77
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2
Query: 157 VKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVXRGPI 26
VK+ C CR+ A +V L C H C+CT CD V P+
Sbjct: 167 VKSSGPMCKACRKRVA---SVVLLPCRHFCICTQCDGVVQACPL 207
>UniRef50_A1SBG7 Cluster: Putative uncharacterized protein; n=1;
Shewanella amazonensis SB2B|Rep: Putative
uncharacterized protein - Shewanella amazonensis (strain
ATCC BAA-1098 / SB2B)
Length = 125
Score = 35.9 bits (79), Expect = 1.0
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +3
Query: 426 FRRTTYAQHNTVFNNGHTLLVKRSGRRRHVTKRFFK---QVHQLVANIASSVSGVHGDLP 596
F A N NG LL+ R HV+ FF V ++ +A S+ GV GDLP
Sbjct: 47 FEALDEALANQEIENGWDLLIAYYNDRYHVSVSFFSGQGSVAEVANTVAESIRGVFGDLP 106
Query: 597 AT 602
T
Sbjct: 107 LT 108
>UniRef50_Q06VJ9 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni ascovirus 2c|Rep: Putative
uncharacterized protein - Trichoplusia ni ascovirus 2c
Length = 565
Score = 35.5 bits (78), Expect = 1.3
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -2
Query: 205 EIIKTDRNLPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDC 53
E I+TD LPL+ N+ +C+ C+++ Y + + CGH C C DC
Sbjct: 487 ERIQTDL-LPLSCSQNIITNMGSCILCKQN---YISCCCVPCGHMCFCIDC 533
>UniRef50_Q969V5 Cluster: RING finger protein C1orf166; n=22;
Euteleostomi|Rep: RING finger protein C1orf166 - Homo
sapiens (Human)
Length = 352
Score = 35.1 bits (77), Expect = 1.8
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 154 KAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDC 53
+++ SAC+ C SF + +L CGH C CT+C
Sbjct: 296 ESLKSACVVCLSSFK---SCVFLECGHVCSCTEC 326
>UniRef50_A2G3U3 Cluster: Ankyrin repeat protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ankyrin repeat protein,
putative - Trichomonas vaginalis G3
Length = 703
Score = 34.7 bits (76), Expect = 2.4
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -2
Query: 178 PLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDC 53
PLNT+ +++ +S C+ C+R AV + CGH C+C C
Sbjct: 641 PLNTQADMR--ESFCLYCKRRPAV---AAMMPCGHLCVCEVC 677
>UniRef50_Q0EZJ0 Cluster: Histidyl-tRNA synthetase; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Histidyl-tRNA
synthetase - Mariprofundus ferrooxydans PV-1
Length = 412
Score = 34.3 bits (75), Expect = 3.1
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -2
Query: 136 CMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVXRGPIRVLNVKAA 2
C CR + VTYL LC C E + R P+RVL+ K A
Sbjct: 170 CNSCRPGYRD-KLVTYLQARADRLCETCVERITRNPMRVLDCKVA 213
>UniRef50_Q1RPW2 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 879
Score = 33.9 bits (74), Expect = 4.1
Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = -2
Query: 214 KTLEIIKTDRNLPLNT----ECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDE 47
+T E ++T+ ++P + E ++ + +C+ + ++ CGH C CT+C E
Sbjct: 800 RTNESMETEISIPPDVTPSMEARIRELQEE-RKCKICLDKVADIVFVPCGHLCTCTECAE 858
Query: 46 TVXRGPI 26
+ + PI
Sbjct: 859 ALRKCPI 865
>UniRef50_Q2II02 Cluster: Histidyl-tRNA synthetase; n=1;
Anaeromyxobacter dehalogenans 2CP-C|Rep: Histidyl-tRNA
synthetase - Anaeromyxobacter dehalogenans (strain
2CP-C)
Length = 426
Score = 33.5 bits (73), Expect = 5.4
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -2
Query: 181 LPLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVXRGPIRVLNVK 8
L + E + +V A +CR ++ YL LC DC + + R P+RVL+ K
Sbjct: 165 LGVTAELKLNSVGDA--QCRPAYLA-DLKAYLVSNQGALCADCKDRIERNPLRVLDCK 219
>UniRef50_A5C2T9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 884
Score = 33.5 bits (73), Expect = 5.4
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -3
Query: 426 TKNYQRNFDSNLPQPPRSTTCTTVALRRKRFEFWLARY--LRCTTRPSIGTAARCSRC 259
T + ++FD LPQPP S+T ++L ++ +L RY + T+ SI S C
Sbjct: 143 TAHVAQSFDPQLPQPPSSSTSQGISLTDSEYDDYL-RYQATKSTSIASIAQTGNASAC 199
>UniRef50_Q54HN7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 687
Score = 33.1 bits (72), Expect = 7.2
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 399 NRNSVGNF*FRRTTYAQHNTVFNNGHTLLVKRSGRRRHVTKRFFKQVHQ 545
N N+ G F FR ++QHN N H+ RS H +R++ + ++
Sbjct: 103 NNNNTGGFRFRDYWFSQHNNFHNKSHSYF--RSHFYNHSNRRYYNRANK 149
>UniRef50_A2X0I0 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 343
Score = 32.7 bits (71), Expect = 9.5
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 139 ACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVXRGPI 26
AC CR A AV + C H CLC DC++ P+
Sbjct: 295 ACRLCRMKEA---AVLVMPCRHLCLCADCEKNADVCPV 329
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,763,723
Number of Sequences: 1657284
Number of extensions: 12875927
Number of successful extensions: 38839
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 37289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38816
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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