Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13d10
(725 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC014010-1|AAH14010.1| 352|Homo sapiens chromosome 1 open readi... 35 0.26
BC010101-1|AAH10101.1| 352|Homo sapiens chromosome 1 open readi... 35 0.26
AL391357-2|CAH73470.1| 352|Homo sapiens chromosome 1 open readi... 35 0.26
AK022937-1|BAB14317.1| 352|Homo sapiens protein ( Homo sapiens ... 35 0.26
AB097015-1|BAC77368.1| 352|Homo sapiens putative NFkB activatin... 35 0.26
BC071665-1|AAH71665.2| 236|Homo sapiens baculoviral IAP repeat-... 32 2.4
AF420440-1|AAL30369.1| 236|Homo sapiens testis-specific inhibit... 32 2.4
AJ628245-1|CAF31637.1| 177|Homo sapiens keratin associated prot... 31 4.2
AB126071-1|BAD20198.1| 177|Homo sapiens keratin associated prot... 31 4.2
BC039318-1|AAH39318.1| 236|Homo sapiens baculoviral IAP repeat-... 30 9.7
AF164682-1|AAK81892.1| 236|Homo sapiens IAP-like protein 2 prot... 30 9.7
>BC014010-1|AAH14010.1| 352|Homo sapiens chromosome 1 open reading
frame 166 protein.
Length = 352
Score = 35.1 bits (77), Expect = 0.26
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 154 KAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDC 53
+++ SAC+ C SF + +L CGH C CT+C
Sbjct: 296 ESLKSACVVCLSSFK---SCVFLECGHVCSCTEC 326
>BC010101-1|AAH10101.1| 352|Homo sapiens chromosome 1 open reading
frame 166 protein.
Length = 352
Score = 35.1 bits (77), Expect = 0.26
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 154 KAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDC 53
+++ SAC+ C SF + +L CGH C CT+C
Sbjct: 296 ESLKSACVVCLSSFK---SCVFLECGHVCSCTEC 326
>AL391357-2|CAH73470.1| 352|Homo sapiens chromosome 1 open reading
frame 166 protein.
Length = 352
Score = 35.1 bits (77), Expect = 0.26
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 154 KAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDC 53
+++ SAC+ C SF + +L CGH C CT+C
Sbjct: 296 ESLKSACVVCLSSFK---SCVFLECGHVCSCTEC 326
>AK022937-1|BAB14317.1| 352|Homo sapiens protein ( Homo sapiens
cDNA FLJ12875 fis, clone NT2RP2003777. ).
Length = 352
Score = 35.1 bits (77), Expect = 0.26
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 154 KAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDC 53
+++ SAC+ C SF + +L CGH C CT+C
Sbjct: 296 ESLKSACVVCLSSFK---SCVFLECGHVCSCTEC 326
>AB097015-1|BAC77368.1| 352|Homo sapiens putative NFkB activating
protein protein.
Length = 352
Score = 35.1 bits (77), Expect = 0.26
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 154 KAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDC 53
+++ SAC+ C SF + +L CGH C CT+C
Sbjct: 296 ESLKSACVVCLSSFK---SCVFLECGHVCSCTEC 326
>BC071665-1|AAH71665.2| 236|Homo sapiens baculoviral IAP
repeat-containing 8 protein.
Length = 236
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 127 CRRSFAVYPAVTYLHCGHSCLCTDCDETVXRGPI 26
C+ Y AV ++ CGH C C E V R P+
Sbjct: 189 CKICMDRYIAVVFIPCGHLVTCKQCAEAVDRCPM 222
>AF420440-1|AAL30369.1| 236|Homo sapiens testis-specific inhibitor
of apoptosis protein.
Length = 236
Score = 31.9 bits (69), Expect = 2.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 127 CRRSFAVYPAVTYLHCGHSCLCTDCDETVXRGPI 26
C+ Y AV ++ CGH C C E V R P+
Sbjct: 189 CKICMDRYIAVVFIPCGHLVTCKQCAEAVDRCPM 222
>AJ628245-1|CAF31637.1| 177|Homo sapiens keratin associated protein
5-8 protein.
Length = 177
Score = 31.1 bits (67), Expect = 4.2
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +1
Query: 124 CNACMHCRQPSHCILC*AASFCRS**FPAFCCE--CPQSQ--LHVCCSAAP*TPC 276
C +C C Q S C C +S C S + CC+ C QS + VCC ++ PC
Sbjct: 108 CGSC-GCSQSSCCKPCCCSSGCGSSCCQSSCCKPCCCQSSCCVPVCCQSSCCKPC 161
>AB126071-1|BAD20198.1| 177|Homo sapiens keratin associated protein
protein.
Length = 177
Score = 31.1 bits (67), Expect = 4.2
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +1
Query: 124 CNACMHCRQPSHCILC*AASFCRS**FPAFCCE--CPQSQ--LHVCCSAAP*TPC 276
C +C C Q S C C +S C S + CC+ C QS + VCC ++ PC
Sbjct: 108 CGSC-GCSQSSCCKPCCCSSGCGSSCCQSSCCKPCCCQSSCCVPVCCQSSCCKPC 161
>BC039318-1|AAH39318.1| 236|Homo sapiens baculoviral IAP
repeat-containing 8 protein.
Length = 236
Score = 29.9 bits (64), Expect = 9.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 127 CRRSFAVYPAVTYLHCGHSCLCTDCDETVXRGPI 26
C+ + AV ++ CGH C C E V R P+
Sbjct: 189 CKICMDRHIAVVFIPCGHLVTCKQCAEAVDRCPM 222
>AF164682-1|AAK81892.1| 236|Homo sapiens IAP-like protein 2
protein.
Length = 236
Score = 29.9 bits (64), Expect = 9.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 127 CRRSFAVYPAVTYLHCGHSCLCTDCDETVXRGPI 26
C+ + AV ++ CGH C C E V R P+
Sbjct: 189 CKICMDRHIAVVFIPCGHLVTCKQCAEAVDRCPM 222
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,999,566
Number of Sequences: 237096
Number of extensions: 1880991
Number of successful extensions: 4665
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4665
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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