Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13d08
(652 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 258 2e-69
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 257 6e-69
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 257 6e-69
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 256 8e-69
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 254 3e-68
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 251 4e-67
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 249 1e-66
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 248 3e-66
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 241 3e-64
12_02_1282 + 27528159-27529148,27529549-27529614 181 4e-46
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 111 5e-25
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 102 2e-22
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 99 3e-21
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 83 2e-16
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 82 3e-16
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 77 1e-14
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 77 1e-14
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 75 7e-14
11_03_0057 + 9375083-9375088,9375904-9376031,9376107-9376166,937... 33 0.26
05_01_0311 + 2452230-2452232,2452401-2452809,2454136-2454263,245... 31 0.60
08_02_0238 + 14665813-14668798,14669088-14669125 29 3.2
01_06_1741 + 39581656-39581680,39582627-39582697,39582779-395828... 29 3.2
05_04_0437 + 21234261-21234592,21234929-21234997,21235506-212356... 28 7.4
03_05_1049 - 29956379-29956400,29957103-29957188,29957269-299574... 28 7.4
02_05_0615 - 30364956-30365729,30365813-30366286 28 7.4
12_01_0748 - 6728221-6728305,6728788-6728842,6729202-6729289,672... 27 9.8
09_02_0456 - 9525067-9525422,9525679-9528226 27 9.8
09_01_0014 + 357398-357583,360213-360323,360520-360676,361067-36... 27 9.8
03_02_0028 - 5118621-5119448 27 9.8
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 258 bits (633), Expect = 2e-69
Identities = 118/131 (90%), Positives = 124/131 (94%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVITIG ERFRCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTT
Sbjct: 247 GQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTT 306
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
M+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDE
Sbjct: 307 MFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDE 366
Query: 290 SGPSIVHRKCF 258
SGPSIVHRKCF
Sbjct: 367 SGPSIVHRKCF 377
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 257 bits (629), Expect = 6e-69
Identities = 118/131 (90%), Positives = 123/131 (93%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTT
Sbjct: 244 GQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTT 303
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
M+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct: 304 MFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 363
Query: 290 SGPSIVHRKCF 258
SGPSIVHRKCF
Sbjct: 364 SGPSIVHRKCF 374
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 257 bits (629), Expect = 6e-69
Identities = 116/131 (88%), Positives = 124/131 (94%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVITIG+ERFRCPE LFQPS +GME+ GIHETTYNSIMKCDVDIRKDLY N VLSGGTT
Sbjct: 247 GQVITIGSERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTT 306
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
M+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct: 307 MFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDE 366
Query: 290 SGPSIVHRKCF 258
SGP+IVHRKCF
Sbjct: 367 SGPAIVHRKCF 377
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 256 bits (628), Expect = 8e-69
Identities = 117/131 (89%), Positives = 123/131 (93%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTT
Sbjct: 247 GQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTT 306
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
M+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct: 307 MFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDE 366
Query: 290 SGPSIVHRKCF 258
SGP+IVHRKCF
Sbjct: 367 SGPAIVHRKCF 377
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 254 bits (623), Expect = 3e-68
Identities = 116/131 (88%), Positives = 123/131 (93%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+T
Sbjct: 250 GQVITIGAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGST 309
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
M+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct: 310 MFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDE 369
Query: 290 SGPSIVHRKCF 258
SGP+IVHRKCF
Sbjct: 370 SGPAIVHRKCF 380
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 251 bits (614), Expect = 4e-67
Identities = 113/131 (86%), Positives = 123/131 (93%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVITIG ERFRCPE +FQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+T
Sbjct: 247 GQVITIGAERFRCPEVMFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGST 306
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
M+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWIS+ EY+E
Sbjct: 307 MFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEE 366
Query: 290 SGPSIVHRKCF 258
SGP+IVHRKCF
Sbjct: 367 SGPAIVHRKCF 377
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 249 bits (610), Expect = 1e-66
Identities = 113/131 (86%), Positives = 119/131 (90%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVITIG ERFRCPE LFQPSF+GMEA GIHE TYNSIMKCDVDIRKDLY N VLSGG+T
Sbjct: 246 GQVITIGAERFRCPEVLFQPSFIGMEAPGIHEATYNSIMKCDVDIRKDLYGNVVLSGGST 305
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
M+PGI DRM KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct: 306 MFPGIGDRMSKEITALAPGSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDE 365
Query: 290 SGPSIVHRKCF 258
SGP IVH KCF
Sbjct: 366 SGPGIVHMKCF 376
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 248 bits (607), Expect = 3e-66
Identities = 112/131 (85%), Positives = 121/131 (92%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVITIG+ERFRCPE LFQPS +GME+ GIHE TYNSIMKCDVDIRKDLY N VLSGG+T
Sbjct: 246 GQVITIGSERFRCPEVLFQPSLVGMESPGIHEATYNSIMKCDVDIRKDLYGNVVLSGGST 305
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
M+PGIADRM KEIT+LAPS+MK+K+IAPPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct: 306 MFPGIADRMSKEITSLAPSSMKVKVIAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 365
Query: 290 SGPSIVHRKCF 258
SGP IVH KCF
Sbjct: 366 SGPGIVHMKCF 376
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 241 bits (591), Expect = 3e-64
Identities = 117/145 (80%), Positives = 124/145 (85%), Gaps = 14/145 (9%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVITIG ERFRCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+T
Sbjct: 247 GQVITIGAERFRCPEVLFQPSFIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGST 306
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ----------- 324
M+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQ
Sbjct: 307 MFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNLTPTLYEV 366
Query: 323 ---QMWISKQEYDESGPSIVHRKCF 258
QMWISK EYDESGP+IVHRKCF
Sbjct: 367 ARMQMWISKGEYDESGPAIVHRKCF 391
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 181 bits (441), Expect = 4e-46
Identities = 94/131 (71%), Positives = 98/131 (74%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVITIG ERFRCPE LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTT
Sbjct: 247 GQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTT 306
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
M+PGIADRM KEITALAPS+MKIK MWI+K EYDE
Sbjct: 307 MFPGIADRMSKEITALAPSSMKIK--------------------------MWIAKAEYDE 340
Query: 290 SGPSIVHRKCF 258
SGPSIVHRKCF
Sbjct: 341 SGPSIVHRKCF 351
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 111 bits (267), Expect = 5e-25
Identities = 59/137 (43%), Positives = 79/137 (57%), Gaps = 6/137 (4%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVITI ER+ EALFQP LG+E GI S+ + + L NT+L GGT
Sbjct: 263 GQVITIEKERYIVGEALFQPHILGLEDYGIVHQLVTSVSNVTPEYHRQLLENTMLCGGTA 322
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPE------RKYSVWIGGSILASLSTFQQMWIS 309
G DR Q+E L+ S + ++ PPE +YS W+GG+ILA + Q ++
Sbjct: 323 SMTGFEDRFQREAN-LSASAICPSLVKPPEYMPENLARYSAWLGGAILAKVVFPQNQHVT 381
Query: 308 KQEYDESGPSIVHRKCF 258
K +YDE+GPSIVH+KCF
Sbjct: 382 KGDYDETGPSIVHKKCF 398
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 102 bits (245), Expect = 2e-22
Identities = 52/131 (39%), Positives = 80/131 (61%), Gaps = 14/131 (10%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFL-----------GMEAXGIHETTYNSIMKCDVDIRKDL 504
GQ I +G +RF+ P+ LF PS M G+ +S+ +CDVDIRK+L
Sbjct: 339 GQTIEVGADRFKIPDILFNPSLSQTIPGVDGFADSMSVRGLPRMVIDSVNRCDVDIRKEL 398
Query: 503 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLS 333
++ +LSGG++ + +R++KE+ + ++K++A ER++SVWIGGSILASL
Sbjct: 399 LSSILLSGGSSSILQLKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGSILASLG 458
Query: 332 TFQQMWISKQE 300
+FQQMW SK +
Sbjct: 459 SFQQMWFSKAD 469
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 99.1 bits (236), Expect = 3e-21
Identities = 47/124 (37%), Positives = 69/124 (55%)
Frame = -3
Query: 629 NERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 450
NERF PE LF P LGM G+ E +I C ++ L+ +L+GG+T++P +
Sbjct: 305 NERFLVPEMLFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTE 364
Query: 449 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 270
R++KE+ L P ++KIIA + W GGS+LA F+ M I+K EY+E G
Sbjct: 365 RLEKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCR 424
Query: 269 RKCF 258
R+ F
Sbjct: 425 RRFF 428
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 83.0 bits (196), Expect = 2e-16
Identities = 45/133 (33%), Positives = 77/133 (57%), Gaps = 10/133 (7%)
Frame = -3
Query: 638 TIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKC---DVDIRKDLYANTVLSGGTTM 468
T+ ERF+ E LFQP G+ A G+H+ + C +V + Y VLSGG++
Sbjct: 350 TLSEERFKTAEILFQPQIGGVRAMGLHKAVSLCMDHCYNSEVFGDDNWYKTVVLSGGSSC 409
Query: 467 YPGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKQEY 297
PG+++R++KE+ L P+ + I++I PP S W G +++++STF + W I K+++
Sbjct: 410 LPGLSERLEKELRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVSTFTEAWCIKKKQF 469
Query: 296 DE----SGPSIVH 270
+ +GPS V+
Sbjct: 470 RQKTRRNGPSFVN 482
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 82.2 bits (194), Expect = 3e-16
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 2/128 (1%)
Frame = -3
Query: 641 ITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKC--DVDIRKDLYANTVLSGGTTM 468
I+IG ERFRCPE LFQP +G++ GI E S+ + D +++ L + +++GG ++
Sbjct: 575 ISIGIERFRCPEILFQPGMIGIDQAGIDEMVSISLRRLMEDEAVKERLCQSILVTGGCSL 634
Query: 467 YPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 288
PG+ R++ I P +K++ + W G + A+ S F + S +Y E
Sbjct: 635 IPGMIPRLESGIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKFGRHTFSLADYREH 694
Query: 287 GPSIVHRK 264
G ++ HRK
Sbjct: 695 GENLFHRK 702
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 77.0 bits (181), Expect = 1e-14
Identities = 45/130 (34%), Positives = 72/130 (55%), Gaps = 25/130 (19%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPS--------------FLGMEAXGIHETTYNSIMKCDVDIR 513
G+VI +G ERF+ PEALF P + +E G+ + + I + D+D R
Sbjct: 261 GRVIKVGTERFQAPEALFTPDQYQHNIDKTFVEQELIDVEGDGMADMAFRCIQEMDIDNR 320
Query: 512 KDLYANTVLSGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPPERKYSV 366
LY + VLSGG+TMYPG+ R++KE+ L + ++++I PP RK+ V
Sbjct: 321 MTLYQHIVLSGGSTMYPGLPSRLEKEMLDRYLDVVLKGNKDGLKKLRLRIEDPPRRKHMV 380
Query: 365 WIGGSILASL 336
++GG++LA +
Sbjct: 381 YLGGAVLAGI 390
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 77.0 bits (181), Expect = 1e-14
Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Frame = -3
Query: 641 ITIGNERFRCPEALFQPSFLGME-AXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 465
I IG ERF PE F P + + + E + + +D R+DLY N VLSGG+TM+
Sbjct: 293 IDIGYERFLGPEIFFHPEIYSADFSTPLPELIDSCVQSAPIDTRRDLYKNIVLSGGSTMF 352
Query: 464 PGIADRMQKEITALAP--------------STMKIKIIAPPERKYSVWIGGSILASLSTF 327
R+Q +I + +++ ++A P + Y+ W GGS+ AS F
Sbjct: 353 KDFHKRLQNDIKKIVDERVAATNARHHVEVKPVEVNVVAHPIQSYAAWFGGSVAASNPEF 412
Query: 326 QQMWISKQEYDESGPSI 276
+ +K+EY+E G SI
Sbjct: 413 YESCHTKEEYEEHGASI 429
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 74.5 bits (175), Expect = 7e-14
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 17/137 (12%)
Frame = -3
Query: 635 IGNERFRCPEALFQPSFLGME-AXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPG 459
IG ERF PE F P + +H I +D R+ LY N VLSGG+TM+
Sbjct: 326 IGYERFLGPEIFFHPEIYNNDFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKD 385
Query: 458 IADRMQKEITALAPS----------------TMKIKIIAPPERKYSVWIGGSILASLSTF 327
R+Q+++ + + +++ +++ P ++Y+VW GGS+LAS + F
Sbjct: 386 FHRRLQRDLKKIVDARVLASNARLGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEF 445
Query: 326 QQMWISKQEYDESGPSI 276
+ +K EY+E G SI
Sbjct: 446 YEACHTKAEYEEYGASI 462
>11_03_0057 +
9375083-9375088,9375904-9376031,9376107-9376166,
9376832-9376892,9377434-9377583,9377667-9377822,
9377905-9378116,9378572-9378673,9378785-9378924,
9379781-9379932
Length = 388
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = -3
Query: 563 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 384
I E Y I++ ++ ++ T +G MYP D +K+ L K APP
Sbjct: 226 IRELIYRDILEYHPNMLREYLEGTESAG--FMYPSAVDHFKKQFAYLEEHYAKGSTAAPP 283
Query: 383 ERKYSVWIGGSILAS 339
ER+++ S+L S
Sbjct: 284 ERQHNSLPRPSVLYS 298
>05_01_0311 +
2452230-2452232,2452401-2452809,2454136-2454263,
2455287-2455436,2455526-2455681,2455775-2455986,
2456306-2456407,2456517-2456653,2456769-2457055
Length = 527
Score = 31.5 bits (68), Expect = 0.60
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = -3
Query: 563 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 384
I E Y I++ + ++ T +G MYP D +K+ L K APP
Sbjct: 321 IRELIYREILEYHPKMLREFLEGTESTG--FMYPSAVDHFKKQFAYLEEHYAKGSTAAPP 378
Query: 383 ERKYS 369
ER+++
Sbjct: 379 ERQHN 383
>08_02_0238 + 14665813-14668798,14669088-14669125
Length = 1007
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 354 STDPYGVLPLWRSNDLNLHCRW-GESC 431
S DP G L W+ ND CRW G +C
Sbjct: 62 SNDPGGFLGSWKQNDSIGFCRWPGVTC 88
>01_06_1741 +
39581656-39581680,39582627-39582697,39582779-39582898,
39583034-39583094,39583186-39583242,39583413-39583600,
39583747-39583818,39583953-39584180
Length = 273
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = -1
Query: 376 STPYGSVDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSASKRTARRCLQQPAAGCSIQAC 197
+TPY + P +N ++ +A P A KRTA + + +AG + + C
Sbjct: 214 ATPYPAKQAKKTPV--NNDMAKQSSGYVHVATPYPAKQAKKRTANNDMSEHSAGYACKPC 271
Query: 196 N 194
N
Sbjct: 272 N 272
>05_04_0437 +
21234261-21234592,21234929-21234997,21235506-21235629,
21235740-21235745
Length = 176
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = -1
Query: 364 GSVDRSSPPSLPSNKC----GSRNKSTTSLAPPLYTGSASKRTARRCLQQPAAGCS 209
G R PP PS+ G ++ + S A P+ S SKR RR ++ +GCS
Sbjct: 68 GEARRRIPPKAPSSDASLSDGGGSEGSDSGAAPIE--SPSKRPRRRLVEHGHSGCS 121
>03_05_1049 -
29956379-29956400,29957103-29957188,29957269-29957413,
29958518-29958813,29959242-29959253
Length = 186
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 370 PYGSVDRSSPPSLPSNKCGS 311
P+ V SSPP+LP KCG+
Sbjct: 72 PFVGVPPSSPPALPPIKCGA 91
>02_05_0615 - 30364956-30365729,30365813-30366286
Length = 415
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 328 SNKC-GSRNKSTTSLAPPLYTGSASKRTARRCLQQ 227
+N C G +T + APP Y AS RTA R L++
Sbjct: 256 NNDCHGGDPNATAATAPPEYAVRASFRTALRALRE 290
>12_01_0748 -
6728221-6728305,6728788-6728842,6729202-6729289,
6729681-6729818,6729978-6730142,6730235-6730354,
6730555-6730631,6730738-6731113,6731523-6732617
Length = 732
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 321 LLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWG 422
+L+ E S P +LPL NDL+ RWG
Sbjct: 402 VLDAIEKQNYESPPPVSILPLGTGNDLSRVMRWG 435
>09_02_0456 - 9525067-9525422,9525679-9528226
Length = 967
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 357 TDPYGVLPLWRSNDLNLHCRWGE-SCD 434
TDP L WR +DL CRW +CD
Sbjct: 46 TDPTAALSAWRGDDL---CRWPHVACD 69
>09_01_0014 +
357398-357583,360213-360323,360520-360676,361067-361233,
362012-362122,362206-362349,362436-362476,364134-364174,
364175-364261,365402-365724
Length = 455
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +2
Query: 455 RFQGTWWYHRTIR----CWRTSPYGCPRRTS*WSYMW 553
R +G WW + +R + P+ CP R W + W
Sbjct: 178 RIRGKWWQAQGVRQEAGAVKGKPHLCPARKLFWDWSW 214
>03_02_0028 - 5118621-5119448
Length = 275
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = -1
Query: 301 STTSLA---PPLYTGSASKRTARRCLQQPAAG 215
+TT LA PP + GS +R RR QQP G
Sbjct: 22 TTTLLATDHPPFFPGSCPRRVPRRRPQQPPPG 53
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,780,726
Number of Sequences: 37544
Number of extensions: 379162
Number of successful extensions: 1207
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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