Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13d08
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 274 3e-74
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 274 3e-74
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 274 3e-74
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 274 3e-74
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 274 3e-74
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 274 3e-74
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 273 6e-74
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 273 6e-74
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 273 6e-74
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 267 4e-72
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 262 2e-70
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 142 3e-34
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 118 4e-27
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 115 3e-26
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 99 1e-21
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 92 4e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 71 5e-13
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 71 5e-13
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 8e-06
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.54
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.54
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.54
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 274 bits (672), Expect = 3e-74
Identities = 126/131 (96%), Positives = 130/131 (99%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTT
Sbjct: 246 GQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 290 SGPSIVHRKCF 258
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 274 bits (672), Expect = 3e-74
Identities = 126/131 (96%), Positives = 130/131 (99%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTT
Sbjct: 246 GQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 290 SGPSIVHRKCF 258
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 274 bits (672), Expect = 3e-74
Identities = 126/131 (96%), Positives = 130/131 (99%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTT
Sbjct: 246 GQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 290 SGPSIVHRKCF 258
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 274 bits (672), Expect = 3e-74
Identities = 126/131 (96%), Positives = 130/131 (99%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTT
Sbjct: 202 GQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 261
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 262 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 321
Query: 290 SGPSIVHRKCF 258
SGPSIVHRKCF
Sbjct: 322 SGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 274 bits (672), Expect = 3e-74
Identities = 126/131 (96%), Positives = 130/131 (99%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTT
Sbjct: 232 GQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 291
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 292 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 351
Query: 290 SGPSIVHRKCF 258
SGPSIVHRKCF
Sbjct: 352 SGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 274 bits (672), Expect = 3e-74
Identities = 126/131 (96%), Positives = 130/131 (99%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTT
Sbjct: 246 GQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 290 SGPSIVHRKCF 258
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 273 bits (670), Expect = 6e-74
Identities = 125/131 (95%), Positives = 130/131 (99%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTT
Sbjct: 246 GQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 290 SGPSIVHRKCF 258
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 273 bits (670), Expect = 6e-74
Identities = 125/131 (95%), Positives = 130/131 (99%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTT
Sbjct: 246 GQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 290 SGPSIVHRKCF 258
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 273 bits (670), Expect = 6e-74
Identities = 125/131 (95%), Positives = 130/131 (99%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTT
Sbjct: 246 GQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 290 SGPSIVHRKCF 258
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 267 bits (655), Expect = 4e-72
Identities = 124/131 (94%), Positives = 129/131 (98%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTT
Sbjct: 246 GQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 305
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
MYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 364
Query: 290 SGPSIVHRKCF 258
SGPSIVHRKCF
Sbjct: 365 SGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 262 bits (642), Expect = 2e-70
Identities = 121/131 (92%), Positives = 125/131 (95%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
GQVITIGNERFRCPE LFQP+F+GME GIHETTY SIMKCDVDIRKDLYANTVLSGGT+
Sbjct: 245 GQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTS 304
Query: 470 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 305 MFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 364
Query: 290 SGPSIVHRKCF 258
SGPSIVHRKCF
Sbjct: 365 SGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 142 bits (343), Expect = 3e-34
Identities = 64/128 (50%), Positives = 87/128 (67%)
Frame = -3
Query: 641 ITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 462
I I N FR PE LF+P +G E G+ SIMKCDVD+R+ LY+N VLSGGTT++
Sbjct: 247 IEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFK 306
Query: 461 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 282
G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G
Sbjct: 307 GFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGA 366
Query: 281 SIVHRKCF 258
S +H++ F
Sbjct: 367 SAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 118 bits (284), Expect = 4e-27
Identities = 60/135 (44%), Positives = 82/135 (60%), Gaps = 13/135 (9%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 471
G+VI +G ERF PE LFQP + +E G+ E + I D+D R D Y + VLSGGTT
Sbjct: 249 GRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTT 308
Query: 470 MYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL--ST 330
MYPG+ R++KE+ L A KI+I APP RK+ V++GG++LA+L
Sbjct: 309 MYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDR 368
Query: 329 FQQMWISKQEYDESG 285
Q W+SK+EY+E G
Sbjct: 369 DQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 115 bits (276), Expect = 3e-26
Identities = 58/138 (42%), Positives = 78/138 (56%), Gaps = 8/138 (5%)
Frame = -3
Query: 650 GQVITIGNERFRCPEALFQPSFLGMEAXG-----IHETTYNSIMKCDVDIRKDLYANTVL 486
G G ER + PE LF +L E + + S D+DIR L++N +
Sbjct: 298 GYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSNVTV 357
Query: 485 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMW 315
+GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL TFQQMW
Sbjct: 358 TGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMW 417
Query: 314 ISKQEYDESGPSIVHRKC 261
+SK EYDESG SIV +KC
Sbjct: 418 VSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 99 bits (238), Expect = 1e-21
Identities = 41/112 (36%), Positives = 73/112 (65%)
Frame = -3
Query: 635 IGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 456
I N RF C E LF+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 455 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 300
A+++++E++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 91.9 bits (218), Expect = 4e-19
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 17/139 (12%)
Frame = -3
Query: 641 ITIGNERFRCPEALFQPSFLGME-AXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 465
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 464 PGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLS 333
A ++Q+++ L+ P + +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 332 TFQQMWISKQEYDESGPSI 276
F Q+ +K EY E GPSI
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 71.3 bits (167), Expect = 5e-13
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Frame = -3
Query: 641 ITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 462
I +G ERF PE LF PS + ++ G+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 461 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 290 SGPSIVHRKCF*T 252
G S+ F T
Sbjct: 379 RGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 71.3 bits (167), Expect = 5e-13
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Frame = -3
Query: 641 ITIGNERFRCPEALFQPSFLGMEAXGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 462
I +G ERF PE LF PS + ++ G+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 461 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 291
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 290 SGPSIVHRKCF*T 252
G S+ F T
Sbjct: 379 RGDSLEFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -3
Query: 539 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 375
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 374 ----YSVWIGGSILASL-STFQQMWISKQEY 297
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 363 PYGVLPLWRSNDLNLHCRWGESCD 434
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 363 PYGVLPLWRSNDLNLHCRWGESCD 434
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 363 PYGVLPLWRSNDLNLHCRWGESCD 434
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,293,714
Number of Sequences: 27780
Number of extensions: 286649
Number of successful extensions: 898
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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