Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc13d05
         (408 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   1.4  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   1.4  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   1.4  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   1.4  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   1.4  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    25   1.4  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    22   7.5  
DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.        22   9.9  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   9.9  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
 Frame = +1

Query: 16  NIRRHTMVN-AKTRFGERIR---KQSADKY*SEVDNTVLE---RDTRSVRDQL 153
           N+ +H + N  KT    ++R   + SAD+Y ++ D+ +     RD+R  RD L
Sbjct: 140 NVGQHNLQNFLKTAESLKVRGLTESSADRYSADTDSKLRSERIRDSRDERDSL 192


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
 Frame = +1

Query: 16  NIRRHTMVN-AKTRFGERIR---KQSADKY*SEVDNTVLE---RDTRSVRDQL 153
           N+ +H + N  KT    ++R   + SAD+Y ++ D+ +     RD+R  RD L
Sbjct: 140 NVGQHNLQNFLKTAESLKVRGLTESSADRYSADTDSKLRSERIRDSRDERDSL 192


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +2

Query: 290 KSTRSVTGMLAHTDNGPDKFYAKDLMIMSGNVSVH 394
           K T  +TG  A+   GPD     D  ++ G + +H
Sbjct: 697 KKTMEITGSEANVYYGPDYAVVVDANLIDGRLLLH 731


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
 Frame = +1

Query: 16  NIRRHTMVN-AKTRFGERIR---KQSADKY*SEVDNTVLE---RDTRSVRDQL 153
           N+ +H + N  KT    ++R   + SAD+Y ++ D+ +     RD+R  RD L
Sbjct: 92  NVGQHNLQNFLKTAESLKVRGLTESSADRYSADTDSKLRSERIRDSRDERDSL 144


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
 Frame = +1

Query: 16  NIRRHTMVN-AKTRFGERIR---KQSADKY*SEVDNTVLE---RDTRSVRDQL 153
           N+ +H + N  KT    ++R   + SAD+Y ++ D+ +     RD+R  RD L
Sbjct: 140 NVGQHNLQNFLKTAESLKVRGLTESSADRYSADTDSKLRSERIRDSRDERDSL 192


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 257 HILSVRKTFEAKSTRSVTG 313
           H++SV KT++ K+ RS+ G
Sbjct: 8   HVISVLKTYQDKAPRSLHG 26


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +2

Query: 197 KYTAPLGFVVTRTQAELQVWHILSVRKTFEAKSTRSVTGML 319
           K+TA  G   +  + E  + H+L      E   T S  GML
Sbjct: 27  KFTASPGLSTSDLKREATICHMLKHPHIVELLETYSSEGML 67


>DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 14  RTSADIQWLMQKHGLVSGYENSR 82
           RTS ++QW   K  +   Y+ +R
Sbjct: 102 RTSLNLQWADSKTTVYEAYDTAR 124


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 115  VLERDTRSVRDQLHSRAAPLSRFI 186
            VLER TR  +DQ+      L RF+
Sbjct: 1927 VLERLTRDHQDQMFKLLRHLIRFV 1950


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,186
Number of Sequences: 2352
Number of extensions: 9305
Number of successful extensions: 24
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32922351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)