Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13d05
(408 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-798|AAF46084.1| 670|Drosophila melanogaster CG4064-PA ... 32 0.25
AF324425-1|AAG48327.1| 2618|Drosophila melanogaster transcriptio... 30 1.3
AF227215-1|AAF43172.1| 2618|Drosophila melanogaster jlkjlkj prot... 30 1.3
AF227214-1|AAF43021.1| 2618|Drosophila melanogaster Pap/DTRAP240... 30 1.3
AF226855-1|AAF36691.1| 2618|Drosophila melanogaster TRAP240 prot... 30 1.3
AE014296-3458|AAN12149.1| 2618|Drosophila melanogaster CG9936-PD... 30 1.3
AE014296-3457|AAN12148.1| 2618|Drosophila melanogaster CG9936-PC... 30 1.3
AE014297-1611|AAN14338.1| 2347|Drosophila melanogaster CG7518-PB... 29 1.8
AE014297-1610|AAF54888.2| 2451|Drosophila melanogaster CG7518-PA... 29 1.8
AE013599-2473|AAF57858.1| 816|Drosophila melanogaster CG6522-PA... 29 2.4
AE014134-1061|AAF52351.2| 471|Drosophila melanogaster CG13990-P... 29 3.1
X64735-1|CAA46001.1| 352|Drosophila melanogaster Wnt-2 protein ... 28 4.1
BT011485-1|AAR99143.1| 250|Drosophila melanogaster LD21093p pro... 28 4.1
BT003204-1|AAO24959.1| 352|Drosophila melanogaster RE36604p pro... 28 4.1
AE014134-1846|AAN10746.2| 305|Drosophila melanogaster CG5025-PB... 28 4.1
AE013599-871|AAF58933.1| 352|Drosophila melanogaster CG1916-PA ... 28 4.1
BT001286-1|AAN71042.1| 932|Drosophila melanogaster AT09001p pro... 27 7.2
AY094627-1|AAM10980.1| 787|Drosophila melanogaster AT01413p pro... 27 7.2
AE014297-3217|AAF56048.1| 919|Drosophila melanogaster CG4907-PA... 27 7.2
AE014134-3584|AAF57255.1| 485|Drosophila melanogaster CG5922-PA... 27 7.2
AY282465-1|AAQ22732.1| 2517|Drosophila melanogaster Mei-41 protein. 27 9.5
AY061373-1|AAL28921.1| 1205|Drosophila melanogaster LD29485p pro... 27 9.5
AY058405-1|AAL13634.1| 633|Drosophila melanogaster GH17657p pro... 27 9.5
AE014298-2397|AAF48604.2| 2517|Drosophila melanogaster CG4252-PA... 27 9.5
AE014297-4312|AAF56851.2| 771|Drosophila melanogaster CG11305-P... 27 9.5
AE014296-340|AAF47556.1| 1205|Drosophila melanogaster CG2069-PA ... 27 9.5
AE013599-2281|AAF57997.1| 633|Drosophila melanogaster CG7848-PA... 27 9.5
>AE014298-798|AAF46084.1| 670|Drosophila melanogaster CG4064-PA
protein.
Length = 670
Score = 32.3 bits (70), Expect = 0.25
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Frame = +1
Query: 16 NIRRHTMVNAKTRFGERIRKQSADKY*SEVDNTV-LERDTRSVRDQL-HSRAAPLSRFIY 189
N + + + ++ R +R ++ AD+Y + T LE D SV + H RA P+S
Sbjct: 297 NTKLNEQIESQVRTLDRYMQKRADRYYNNCTQTEPLEEDDVSVGGGVNHGRATPVSSNTM 356
Query: 190 IQQVHCAVGICGNAHTSRAASVAHFVCAQNL*SQKHKVRYGHASAHGQRT 339
Q A G ++ + VC Q Q H + HA + T
Sbjct: 357 GTQTQAANGTRDHSTNTIGCPSPALVCQQQHLHQAHGHLHPHAPSASSST 406
>AF324425-1|AAG48327.1| 2618|Drosophila melanogaster transcriptional
coactivator blindspot protein.
Length = 2618
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 226 NAHTSRAASVAHFVCAQNL*SQKHKVRYGHASAHGQRTRQILRQ 357
++H SRAA++A AQ QKH+ H Q+ +Q+ Q
Sbjct: 1188 SSHKSRAATLAKAAAAQQQQHQKHQALQQRIQLHQQKLQQLQLQ 1231
>AF227215-1|AAF43172.1| 2618|Drosophila melanogaster jlkjlkj protein.
Length = 2618
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 226 NAHTSRAASVAHFVCAQNL*SQKHKVRYGHASAHGQRTRQILRQ 357
++H SRAA++A AQ QKH+ H Q+ +Q+ Q
Sbjct: 1188 SSHKSRAATLAKAAAAQQQQHQKHQALQQRIQLHQQKLQQLQLQ 1231
>AF227214-1|AAF43021.1| 2618|Drosophila melanogaster Pap/DTRAP240
protein.
Length = 2618
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 226 NAHTSRAASVAHFVCAQNL*SQKHKVRYGHASAHGQRTRQILRQ 357
++H SRAA++A AQ QKH+ H Q+ +Q+ Q
Sbjct: 1188 SSHKSRAATLAKAAAAQQQQHQKHQALQQRIQLHQQKLQQLQLQ 1231
>AF226855-1|AAF36691.1| 2618|Drosophila melanogaster TRAP240 protein.
Length = 2618
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 226 NAHTSRAASVAHFVCAQNL*SQKHKVRYGHASAHGQRTRQILRQ 357
++H SRAA++A AQ QKH+ H Q+ +Q+ Q
Sbjct: 1188 SSHKSRAATLAKAAAAQQQQHQKHQALQQRIQLHQQKLQQLQLQ 1231
>AE014296-3458|AAN12149.1| 2618|Drosophila melanogaster CG9936-PD,
isoform D protein.
Length = 2618
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 226 NAHTSRAASVAHFVCAQNL*SQKHKVRYGHASAHGQRTRQILRQ 357
++H SRAA++A AQ QKH+ H Q+ +Q+ Q
Sbjct: 1188 SSHKSRAATLAKAAAAQQQQHQKHQALQQRIQLHQQKLQQLQLQ 1231
>AE014296-3457|AAN12148.1| 2618|Drosophila melanogaster CG9936-PC,
isoform C protein.
Length = 2618
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 226 NAHTSRAASVAHFVCAQNL*SQKHKVRYGHASAHGQRTRQILRQ 357
++H SRAA++A AQ QKH+ H Q+ +Q+ Q
Sbjct: 1188 SSHKSRAATLAKAAAAQQQQHQKHQALQQRIQLHQQKLQQLQLQ 1231
>AE014297-1611|AAN14338.1| 2347|Drosophila melanogaster CG7518-PB,
isoform B protein.
Length = 2347
Score = 29.5 bits (63), Expect = 1.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 234 HKQSCKCGTFCLCAKPLKPKAQGPLRAC 317
H ++CKC T + PL+P+ G C
Sbjct: 555 HNENCKCITCSIAGTPLRPRQAGHCAKC 582
>AE014297-1610|AAF54888.2| 2451|Drosophila melanogaster CG7518-PA,
isoform A protein.
Length = 2451
Score = 29.5 bits (63), Expect = 1.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 234 HKQSCKCGTFCLCAKPLKPKAQGPLRAC 317
H ++CKC T + PL+P+ G C
Sbjct: 555 HNENCKCITCSIAGTPLRPRQAGHCAKC 582
>AE013599-2473|AAF57858.1| 816|Drosophila melanogaster CG6522-PA
protein.
Length = 816
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/20 (50%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = -2
Query: 383 RCPTLSLNPWRRICR-VRCP 327
+CP L L+ WR++CR +CP
Sbjct: 50 KCPGLDLHFWRKVCRNCKCP 69
>AE014134-1061|AAF52351.2| 471|Drosophila melanogaster CG13990-PA
protein.
Length = 471
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +2
Query: 59 VSGYENSRPININLRSITPSLNGTRGAYVISCIRAPRLYR-DLFTYNKYTA---PLGFVV 226
VSG +RP ++ +R P R A I + AP+ + TY KY P GF++
Sbjct: 365 VSGSSKARPSSVKVRPARPVRPAVRPALEIDELSAPKAQELTMSTYTKYVCRNKPDGFML 424
>X64735-1|CAA46001.1| 352|Drosophila melanogaster Wnt-2 protein
protein.
Length = 352
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 291 LASKVLRTDKMCHTCSSACVRVT 223
L K+LRTD CH S +CV T
Sbjct: 187 LVKKMLRTDCKCHGVSGSCVMKT 209
>BT011485-1|AAR99143.1| 250|Drosophila melanogaster LD21093p
protein.
Length = 250
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 196 QVHCAVGICGNAHTSRAASVAHFVCAQNL*SQKHKVRY 309
Q HCA I G A ++A F ++L KHKV +
Sbjct: 197 QAHCATDITGFGLLGHANNLAQFQKEKHLGGPKHKVSF 234
>BT003204-1|AAO24959.1| 352|Drosophila melanogaster RE36604p
protein.
Length = 352
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 291 LASKVLRTDKMCHTCSSACVRVT 223
L K+LRTD CH S +CV T
Sbjct: 187 LVKKMLRTDCKCHGVSGSCVMKT 209
>AE014134-1846|AAN10746.2| 305|Drosophila melanogaster CG5025-PB,
isoform B protein.
Length = 305
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 196 QVHCAVGICGNAHTSRAASVAHFVCAQNL*SQKHKVRY 309
Q HCA I G A ++A F ++L KHKV +
Sbjct: 252 QAHCATDITGFGLLGHANNLAQFQKEKHLGGPKHKVSF 289
>AE013599-871|AAF58933.1| 352|Drosophila melanogaster CG1916-PA
protein.
Length = 352
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 291 LASKVLRTDKMCHTCSSACVRVT 223
L K+LRTD CH S +CV T
Sbjct: 187 LVKKMLRTDCKCHGVSGSCVMKT 209
>BT001286-1|AAN71042.1| 932|Drosophila melanogaster AT09001p
protein.
Length = 932
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 194 NKYTAPLGFVVTRTQAELQVWHILSVRKTFEAK 292
N PLGF+ T Q ELQV H+ +++ +A+
Sbjct: 335 NMALMPLGFLNTSVQYELQVLHLNAMQLLAQAR 367
>AY094627-1|AAM10980.1| 787|Drosophila melanogaster AT01413p
protein.
Length = 787
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 194 NKYTAPLGFVVTRTQAELQVWHILSVRKTFEAK 292
N PLGF+ T Q ELQV H+ +++ +A+
Sbjct: 190 NMALMPLGFLNTSVQYELQVLHLNAMQLLAQAR 222
>AE014297-3217|AAF56048.1| 919|Drosophila melanogaster CG4907-PA
protein.
Length = 919
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 194 NKYTAPLGFVVTRTQAELQVWHILSVRKTFEAK 292
N PLGF+ T Q ELQV H+ +++ +A+
Sbjct: 322 NMALMPLGFLNTSVQYELQVLHLNAMQLLAQAR 354
>AE014134-3584|AAF57255.1| 485|Drosophila melanogaster CG5922-PA
protein.
Length = 485
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Frame = -1
Query: 234 VRVTTNPNGAVYLLYVNKSR*RRGARMQLITY-------APRVPFKDGVIDLRLIFIGRL 76
V V T P + +Y N++R +++QL+ + R+P + + F GR
Sbjct: 158 VVVVTRPRKKAFRIYYNQARPCSDSQLQLVNWYDGDNLGLQRIPLLPTALSVYANFKGRT 217
Query: 75 FSYPLTKPCFCINHC 31
F P P F + +C
Sbjct: 218 FRSP---PWFWVTYC 229
>AY282465-1|AAQ22732.1| 2517|Drosophila melanogaster Mei-41 protein.
Length = 2517
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 100 EVDNTVLERDTRSVRDQLHSRAAPLSRFIYIQQVHCAVGICGNAH 234
E+D+ +LE + ++ QL PL + +++QQ+ + C H
Sbjct: 304 ELDDGLLETLSSYIQGQLEHSVVPLEQLVHLQQLMLSHWHCHPTH 348
>AY061373-1|AAL28921.1| 1205|Drosophila melanogaster LD29485p
protein.
Length = 1205
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 218 FVVTRTQAELQVWHILSVRKTFEAKSTRSVTGMLAHTDNGPDKF-YAKDLMIMSGNVSVH 394
+V +Q E+ +WH + + + ++ H D+ P AKDLM+ S + H
Sbjct: 457 YVAIASQEEILIWHYHTPKSASTLHNVKARKEKRFHIDDTPTGVEMAKDLMLSSSSGDGH 516
>AY058405-1|AAL13634.1| 633|Drosophila melanogaster GH17657p
protein.
Length = 633
Score = 27.1 bits (57), Expect = 9.5
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -1
Query: 294 LLASKVLRTDKMCHTCSSACVRVTTNPNGAVYLLYVNKSR*RRGARMQLITYAPR-VPFK 118
LL V D+ CS+ T N +YL Y+++ R RR L++ R VP
Sbjct: 100 LLPVAVRTIDEQAEICSNLLESFTNNVQQYIYLTYLSR-RNRRLFYYLLLSNPDRFVPMT 158
Query: 117 D--GVIDLRLI 91
D G IDL ++
Sbjct: 159 DASGSIDLLMV 169
>AE014298-2397|AAF48604.2| 2517|Drosophila melanogaster CG4252-PA
protein.
Length = 2517
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 100 EVDNTVLERDTRSVRDQLHSRAAPLSRFIYIQQVHCAVGICGNAH 234
E+D+ +LE + ++ QL PL + +++QQ+ + C H
Sbjct: 304 ELDDGLLETLSSYIQGQLEHSVVPLEQLVHLQQLMLSHWHCHPTH 348
>AE014297-4312|AAF56851.2| 771|Drosophila melanogaster CG11305-PA
protein.
Length = 771
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 207 RRWDLW*RAHKQSCKCGTFCLC 272
RRW+L R HK+ + G F +C
Sbjct: 690 RRWNLSQRKHKKRARSGRFVVC 711
>AE014296-340|AAF47556.1| 1205|Drosophila melanogaster CG2069-PA
protein.
Length = 1205
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 218 FVVTRTQAELQVWHILSVRKTFEAKSTRSVTGMLAHTDNGPDKF-YAKDLMIMSGNVSVH 394
+V +Q E+ +WH + + + ++ H D+ P AKDLM+ S + H
Sbjct: 457 YVAIASQEEILIWHYHTPKSASTLHNVKARKEKRFHIDDTPTGVEMAKDLMLSSSSGDGH 516
>AE013599-2281|AAF57997.1| 633|Drosophila melanogaster CG7848-PA
protein.
Length = 633
Score = 27.1 bits (57), Expect = 9.5
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -1
Query: 294 LLASKVLRTDKMCHTCSSACVRVTTNPNGAVYLLYVNKSR*RRGARMQLITYAPR-VPFK 118
LL V D+ CS+ T N +YL Y+++ R RR L++ R VP
Sbjct: 100 LLPVAVRTIDEQAEICSNLLESFTNNVQQYIYLTYLSR-RNRRLFYYLLLSNPDRFVPMT 158
Query: 117 D--GVIDLRLI 91
D G IDL ++
Sbjct: 159 DASGSIDLLMV 169
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,031,344
Number of Sequences: 53049
Number of extensions: 387506
Number of successful extensions: 1217
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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