Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc13d03
         (794 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341429-1|AAR03495.1|  193|Anopheles gambiae sulfakinin preprop...    24   4.7  
CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase ...    23   8.2  
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          23   8.2  

>AY341429-1|AAR03495.1|  193|Anopheles gambiae sulfakinin
           preproprotein protein.
          Length = 193

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 383 YMIHILLAWPIGSFV*IYKHNNELQ 309
           Y +HI  A PIGS V    H+ + Q
Sbjct: 19  YYVHIAEAQPIGSLVLAAPHSQQQQ 43


>CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase
           protein.
          Length = 562

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 409 IVNLEHSEVKQAARHARMFCSYIKFN 486
           I+N    +++       +FCSY  FN
Sbjct: 24  IINTSGGQIQGITASCGLFCSYFAFN 49


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 50  TQTYQKTKGEIKKNCTRSLHK 112
           T+ YQK KGE++K  ++ L K
Sbjct: 30  TEKYQKLKGEVEKQ-SKKLEK 49


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,776
Number of Sequences: 2352
Number of extensions: 15574
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)