Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc13d02
         (757 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   3.3  
EF588657-1|ABQ96843.1|  176|Anopheles gambiae transposase protein.     24   5.8  
EF588625-1|ABQ96815.1|  177|Anopheles gambiae transposase protein.     24   5.8  
EF588618-1|ABQ96809.1|  176|Anopheles gambiae transposase protein.     24   5.8  
EF588615-1|ABQ96806.1|  176|Anopheles gambiae transposase protein.     24   5.8  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   5.8  
AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    23   7.7  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   7.7  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -3

Query: 428 HAILSAVQNKDVDTARALQHKLCLAIESLTKEG 330
           HA+ SAV++  ++ AR +     + + SL  +G
Sbjct: 429 HALFSAVEHGHLEKARTILESTDVDVNSLNSDG 461


>EF588657-1|ABQ96843.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -2

Query: 207 GAGCSLDFRVLE*LKIGTE-ITRQYKI*YNTLLYLKEKKPL 88
           GA C    +V +  K  T  + R   + + T+ YLK+K+P+
Sbjct: 21  GAKCLYGLKVFKYTKGTTSNLKRHLNLVHKTVPYLKQKQPI 61


>EF588625-1|ABQ96815.1|  177|Anopheles gambiae transposase protein.
          Length = 177

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -2

Query: 207 GAGCSLDFRVLE*LKIGTE-ITRQYKI*YNTLLYLKEKKPL 88
           GA C    +V +  K  T  + R   + + T+ YLK+K+P+
Sbjct: 22  GAKCLYGLKVFKYTKGTTSNLKRHLNLVHKTVPYLKQKQPI 62


>EF588618-1|ABQ96809.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -2

Query: 207 GAGCSLDFRVLE*LKIGTE-ITRQYKI*YNTLLYLKEKKPL 88
           GA C    +V +  K  T  + R   + + T+ YLK+K+P+
Sbjct: 21  GAKCLYGLKVFKYTKGTTSNLKRHLNLVHKTVPYLKQKQPI 61


>EF588615-1|ABQ96806.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -2

Query: 207 GAGCSLDFRVLE*LKIGTE-ITRQYKI*YNTLLYLKEKKPL 88
           GA C    +V +  K  T  + R   + + T+ YLK+K+P+
Sbjct: 21  GAKCLYGLKVFKYTKGTTSNLKRHLNLVHKTVPYLKQKQPI 61


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 362 CLAIESLTKEGPWVPVMKAGMEI 294
           C+ I SL +  P +P+   G+EI
Sbjct: 706 CVMISSLRRGHPEIPIRVGGLEI 728


>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = +3

Query: 333 FLG**FDRQTQLVLEGP---RRIHVLILNSTQDSVSYFREEIERRSDARFYAEQGRWC*K 503
           ++G  F R   L++  P   R + V   N   D   Y  EE++  S   F+ E  RW   
Sbjct: 71  YVGIYFFRDPVLLVLSPEFARTVLVKDFNYFVDRGVYSNEEVDPLSANLFFLEGNRW--G 128

Query: 504 RVRSK 518
           ++RSK
Sbjct: 129 KLRSK 133


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 430 AIFGKRLKDVPMLDFMPSRAAGAKSVSAPRNSA 528
           A FG R+KD  MLD+   R      V++   SA
Sbjct: 460 ATFGLRVKDPSMLDYERVRELSLTVVASEVESA 492


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 832,931
Number of Sequences: 2352
Number of extensions: 17895
Number of successful extensions: 278
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 278
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)