Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13d02
(757 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC125051-1|AAI25052.1| 320|Homo sapiens N-acetylneuraminate pyr... 111 3e-24
AY336748-1|AAQ82432.1| 301|Homo sapiens N-acetylneuraminate pyr... 111 3e-24
AL513344-1|CAI16502.1| 320|Homo sapiens N-acetylneuraminate pyr... 111 3e-24
AL355999-2|CAH71702.1| 320|Homo sapiens N-acetylneuraminate pyr... 111 3e-24
AF338436-1|AAK25795.1| 320|Homo sapiens C1orf13 protein. 111 3e-24
BC042003-1|AAH42003.1| 240|Homo sapiens NPL protein protein. 66 1e-10
BC058003-1|AAH58003.1| 240|Homo sapiens NPL protein protein. 62 3e-09
AL513344-2|CAI16503.1| 240|Homo sapiens N-acetylneuraminate pyr... 62 3e-09
AL355999-3|CAH71703.1| 240|Homo sapiens N-acetylneuraminate pyr... 62 3e-09
U45878-1|AAC50371.1| 604|Homo sapiens inhibitor of apoptosis pr... 31 4.5
U37546-1|AAC50507.1| 604|Homo sapiens MIHC protein. 31 4.5
L49432-1|AAC41943.1| 604|Homo sapiens TNFR2-TRAF signalling com... 31 4.5
BC037420-1|AAH37420.1| 604|Homo sapiens baculoviral IAP repeat-... 31 4.5
AY764389-1|AAU88144.1| 604|Homo sapiens baculoviral IAP repeat-... 31 4.5
AF123094-1|AAD46161.1| 1140|Homo sapiens API2-MLT fusion protein... 31 4.5
AF070674-1|AAC83232.1| 604|Homo sapiens inhibitor of apoptosis ... 31 4.5
>BC125051-1|AAI25052.1| 320|Homo sapiens N-acetylneuraminate
pyruvate lyase (dihydrodipicolinate synthase) protein.
Length = 320
Score = 111 bits (267), Expect = 3e-24
Identities = 64/187 (34%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
Frame = -3
Query: 755 PSNVDELVSYVALVAGAAPKLPVLYYHIPSMTRVEINMPAFVTEASKKIPNFAGIKFTSN 576
P D L++++ VA AAP LP YYHIP++T V+I + KIP F G+KF+
Sbjct: 118 PWTKDILINFLKEVAAAAPALPFYYYHIPALTGVKIRAEELLDGILDKIPTFQGLKFSDT 177
Query: 575 DLSEASQVLRAMSEKKALFL-GADTLLAPAALLGIKSSIGTSFNLFPKIAHAILSAVQNK 399
DL + Q + +++ FL G D L A ++G ++G+++N K + +L A + K
Sbjct: 178 DLLDFGQCVDQNRQQQFAFLFGVDEQLLSALVMGATGAVGSTYNYLGKKTNQMLEAFEQK 237
Query: 398 DVDTARALQHKLCLAIESLTKEGPWVPVMKAGMEIVTGIRVGPPSLPQKPLSSEAIERIR 219
D A Q + I + K G V KA M +V+GI +GPP LP + S E +
Sbjct: 238 DFSLALNYQFCIQRFINFVVKLGFGVSQTKAIMTLVSGIPMGPPRLPLQKASREFTDSAE 297
Query: 218 GRLRALD 198
+L++LD
Sbjct: 298 AKLKSLD 304
>AY336748-1|AAQ82432.1| 301|Homo sapiens N-acetylneuraminate
pyruvate lyase-like protein protein.
Length = 301
Score = 111 bits (267), Expect = 3e-24
Identities = 64/187 (34%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
Frame = -3
Query: 755 PSNVDELVSYVALVAGAAPKLPVLYYHIPSMTRVEINMPAFVTEASKKIPNFAGIKFTSN 576
P D L++++ VA AAP LP YYHIP++T V+I + KIP F G+KF+
Sbjct: 99 PWTKDILINFLKEVAAAAPALPFYYYHIPALTGVKIRAEELLDGILDKIPTFQGLKFSDT 158
Query: 575 DLSEASQVLRAMSEKKALFL-GADTLLAPAALLGIKSSIGTSFNLFPKIAHAILSAVQNK 399
DL + Q + +++ FL G D L A ++G ++G+++N K + +L A + K
Sbjct: 159 DLLDFGQCVDQNRQQQFAFLFGVDEQLLSALVMGATGAVGSTYNYLGKKTNQMLEAFEQK 218
Query: 398 DVDTARALQHKLCLAIESLTKEGPWVPVMKAGMEIVTGIRVGPPSLPQKPLSSEAIERIR 219
D A Q + I + K G V KA M +V+GI +GPP LP + S E +
Sbjct: 219 DFSLALNYQFCIQRFINFVVKLGFGVSQTKAIMTLVSGIPMGPPRLPLQKASREFTDSAE 278
Query: 218 GRLRALD 198
+L++LD
Sbjct: 279 AKLKSLD 285
>AL513344-1|CAI16502.1| 320|Homo sapiens N-acetylneuraminate
pyruvate lyase (dihydrodipicolinate synthase) protein.
Length = 320
Score = 111 bits (267), Expect = 3e-24
Identities = 64/187 (34%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
Frame = -3
Query: 755 PSNVDELVSYVALVAGAAPKLPVLYYHIPSMTRVEINMPAFVTEASKKIPNFAGIKFTSN 576
P D L++++ VA AAP LP YYHIP++T V+I + KIP F G+KF+
Sbjct: 118 PWTKDILINFLKEVAAAAPALPFYYYHIPALTGVKIRAEELLDGILDKIPTFQGLKFSDT 177
Query: 575 DLSEASQVLRAMSEKKALFL-GADTLLAPAALLGIKSSIGTSFNLFPKIAHAILSAVQNK 399
DL + Q + +++ FL G D L A ++G ++G+++N K + +L A + K
Sbjct: 178 DLLDFGQCVDQNRQQQFAFLFGVDEQLLSALVMGATGAVGSTYNYLGKKTNQMLEAFEQK 237
Query: 398 DVDTARALQHKLCLAIESLTKEGPWVPVMKAGMEIVTGIRVGPPSLPQKPLSSEAIERIR 219
D A Q + I + K G V KA M +V+GI +GPP LP + S E +
Sbjct: 238 DFSLALNYQFCIQRFINFVVKLGFGVSQTKAIMTLVSGIPMGPPRLPLQKASREFTDSAE 297
Query: 218 GRLRALD 198
+L++LD
Sbjct: 298 AKLKSLD 304
>AL355999-2|CAH71702.1| 320|Homo sapiens N-acetylneuraminate
pyruvate lyase (dihydrodipicolinate synthase) protein.
Length = 320
Score = 111 bits (267), Expect = 3e-24
Identities = 64/187 (34%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
Frame = -3
Query: 755 PSNVDELVSYVALVAGAAPKLPVLYYHIPSMTRVEINMPAFVTEASKKIPNFAGIKFTSN 576
P D L++++ VA AAP LP YYHIP++T V+I + KIP F G+KF+
Sbjct: 118 PWTKDILINFLKEVAAAAPALPFYYYHIPALTGVKIRAEELLDGILDKIPTFQGLKFSDT 177
Query: 575 DLSEASQVLRAMSEKKALFL-GADTLLAPAALLGIKSSIGTSFNLFPKIAHAILSAVQNK 399
DL + Q + +++ FL G D L A ++G ++G+++N K + +L A + K
Sbjct: 178 DLLDFGQCVDQNRQQQFAFLFGVDEQLLSALVMGATGAVGSTYNYLGKKTNQMLEAFEQK 237
Query: 398 DVDTARALQHKLCLAIESLTKEGPWVPVMKAGMEIVTGIRVGPPSLPQKPLSSEAIERIR 219
D A Q + I + K G V KA M +V+GI +GPP LP + S E +
Sbjct: 238 DFSLALNYQFCIQRFINFVVKLGFGVSQTKAIMTLVSGIPMGPPRLPLQKASREFTDSAE 297
Query: 218 GRLRALD 198
+L++LD
Sbjct: 298 AKLKSLD 304
>AF338436-1|AAK25795.1| 320|Homo sapiens C1orf13 protein.
Length = 320
Score = 111 bits (267), Expect = 3e-24
Identities = 64/187 (34%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
Frame = -3
Query: 755 PSNVDELVSYVALVAGAAPKLPVLYYHIPSMTRVEINMPAFVTEASKKIPNFAGIKFTSN 576
P D L++++ VA AAP LP YYHIP++T V+I + KIP F G+KF+
Sbjct: 118 PWTKDILINFLKEVAAAAPALPFYYYHIPALTGVKIRAEELLDGILDKIPTFQGLKFSDT 177
Query: 575 DLSEASQVLRAMSEKKALFL-GADTLLAPAALLGIKSSIGTSFNLFPKIAHAILSAVQNK 399
DL + Q + +++ FL G D L A ++G ++G+++N K + +L A + K
Sbjct: 178 DLLDFGQCVDQNRQQQFAFLFGVDEQLLSALVMGATGAVGSTYNYLGKKTNQMLEAFEQK 237
Query: 398 DVDTARALQHKLCLAIESLTKEGPWVPVMKAGMEIVTGIRVGPPSLPQKPLSSEAIERIR 219
D A Q + I + K G V KA M +V+GI +GPP LP + S E +
Sbjct: 238 DFSLALNYQFCIQRFINFVVKLGFGVSQTKAIMTLVSGIPMGPPRLPLQKASREFTDSAE 297
Query: 218 GRLRALD 198
+L++LD
Sbjct: 298 AKLKSLD 304
>BC042003-1|AAH42003.1| 240|Homo sapiens NPL protein protein.
Length = 240
Score = 66.1 bits (154), Expect = 1e-10
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Frame = -3
Query: 755 PSNVDELVSYVALVAGAAPKLPVLYYHIPSMTRVEINMPAFVTEASKKIPNFAGIKFTSN 576
P D L++++ VA AAP LP YYHIP++T V+I + KIP F G+KF+
Sbjct: 118 PWTKDILINFLKEVAAAAPALPFYYYHIPALTGVKIRAEELLDGILDKIPTFQGLKFSDT 177
Query: 575 DLSEASQVLRAMSEKKALFL-GADTLLAPAALLG 477
DL + Q + +++ FL G D L A ++G
Sbjct: 178 DLLDFGQCVDQNRQQQFAFLFGVDEQLLSALVMG 211
>BC058003-1|AAH58003.1| 240|Homo sapiens NPL protein protein.
Length = 240
Score = 61.7 bits (143), Expect = 3e-09
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = -3
Query: 755 PSNVDELVSYVALVAGAAPKLPVLYYHIPSMTRVEINMPAFVTEASKKIPNFAGIKFTSN 576
P D L++++ VA AAP LP YYHIP++T V+I + KIP F G+KF+
Sbjct: 118 PWTKDILINFLKEVAAAAPALPFYYYHIPALTGVKIRAEELLDGILDKIPTFQGLKFSDT 177
Query: 575 DLSEASQVLRAMSEKKALFL-GAD 507
DL + Q + +++ FL G D
Sbjct: 178 DLLDFGQCVDQNRQQQFAFLFGVD 201
>AL513344-2|CAI16503.1| 240|Homo sapiens N-acetylneuraminate
pyruvate lyase (dihydrodipicolinate synthase) protein.
Length = 240
Score = 61.7 bits (143), Expect = 3e-09
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = -3
Query: 755 PSNVDELVSYVALVAGAAPKLPVLYYHIPSMTRVEINMPAFVTEASKKIPNFAGIKFTSN 576
P D L++++ VA AAP LP YYHIP++T V+I + KIP F G+KF+
Sbjct: 118 PWTKDILINFLKEVAAAAPALPFYYYHIPALTGVKIRAEELLDGILDKIPTFQGLKFSDT 177
Query: 575 DLSEASQVLRAMSEKKALFL-GAD 507
DL + Q + +++ FL G D
Sbjct: 178 DLLDFGQCVDQNRQQQFAFLFGVD 201
>AL355999-3|CAH71703.1| 240|Homo sapiens N-acetylneuraminate
pyruvate lyase (dihydrodipicolinate synthase) protein.
Length = 240
Score = 61.7 bits (143), Expect = 3e-09
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = -3
Query: 755 PSNVDELVSYVALVAGAAPKLPVLYYHIPSMTRVEINMPAFVTEASKKIPNFAGIKFTSN 576
P D L++++ VA AAP LP YYHIP++T V+I + KIP F G+KF+
Sbjct: 118 PWTKDILINFLKEVAAAAPALPFYYYHIPALTGVKIRAEELLDGILDKIPTFQGLKFSDT 177
Query: 575 DLSEASQVLRAMSEKKALFL-GAD 507
DL + Q + +++ FL G D
Sbjct: 178 DLLDFGQCVDQNRQQQFAFLFGVD 201
>U45878-1|AAC50371.1| 604|Homo sapiens inhibitor of apoptosis
protein 1 protein.
Length = 604
Score = 31.1 bits (67), Expect = 4.5
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 57 QKIKPATKFVLTVFFLSNIEAYCIIFYTVSLFQSRFLAIPGPENLGYIQ 203
+K+ P+ +FV ++ ++N+EA + S+ S +PG EN GY +
Sbjct: 87 KKLYPSCRFVQSLNSVNNLEATSQPTFPSSVTHSTHSLLPGTENSGYFR 135
>U37546-1|AAC50507.1| 604|Homo sapiens MIHC protein.
Length = 604
Score = 31.1 bits (67), Expect = 4.5
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 57 QKIKPATKFVLTVFFLSNIEAYCIIFYTVSLFQSRFLAIPGPENLGYIQ 203
+K+ P+ +FV ++ ++N+EA + S+ S +PG EN GY +
Sbjct: 87 KKLYPSCRFVQSLNSVNNLEATSQPTFPSSVTNSTHSLLPGTENSGYFR 135
>L49432-1|AAC41943.1| 604|Homo sapiens TNFR2-TRAF signalling
complex protein protein.
Length = 604
Score = 31.1 bits (67), Expect = 4.5
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 57 QKIKPATKFVLTVFFLSNIEAYCIIFYTVSLFQSRFLAIPGPENLGYIQ 203
+K+ P+ +FV ++ ++N+EA + S+ S +PG EN GY +
Sbjct: 87 KKLYPSCRFVQSLNSVNNLEATSQPTFPSSVTNSTHSLLPGTENSGYFR 135
>BC037420-1|AAH37420.1| 604|Homo sapiens baculoviral IAP
repeat-containing 3 protein.
Length = 604
Score = 31.1 bits (67), Expect = 4.5
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 57 QKIKPATKFVLTVFFLSNIEAYCIIFYTVSLFQSRFLAIPGPENLGYIQ 203
+K+ P+ +FV ++ ++N+EA + S+ S +PG EN GY +
Sbjct: 87 KKLYPSCRFVQSLNSVNNLEATSQPTFPSSVTNSTHSLLPGTENSGYFR 135
>AY764389-1|AAU88144.1| 604|Homo sapiens baculoviral IAP
repeat-containing 3 protein.
Length = 604
Score = 31.1 bits (67), Expect = 4.5
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 57 QKIKPATKFVLTVFFLSNIEAYCIIFYTVSLFQSRFLAIPGPENLGYIQ 203
+K+ P+ +FV ++ ++N+EA + S+ S +PG EN GY +
Sbjct: 87 KKLYPSCRFVQSLNSVNNLEATSQPTFPSSVTNSTHSLLPGTENSGYFR 135
>AF123094-1|AAD46161.1| 1140|Homo sapiens API2-MLT fusion protein
protein.
Length = 1140
Score = 31.1 bits (67), Expect = 4.5
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 57 QKIKPATKFVLTVFFLSNIEAYCIIFYTVSLFQSRFLAIPGPENLGYIQ 203
+K+ P+ +FV ++ ++N+EA + S+ S +PG EN GY +
Sbjct: 87 KKLYPSCRFVQSLNSVNNLEATSQPTFPSSVTNSTHSLLPGTENSGYFR 135
>AF070674-1|AAC83232.1| 604|Homo sapiens inhibitor of apoptosis
protein-1 protein.
Length = 604
Score = 31.1 bits (67), Expect = 4.5
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 57 QKIKPATKFVLTVFFLSNIEAYCIIFYTVSLFQSRFLAIPGPENLGYIQ 203
+K+ P+ +FV ++ ++N+EA + S+ S +PG EN GY +
Sbjct: 87 KKLYPSCRFVQSLNSVNNLEATSQPTFPSSVTNSTHSLLPGTENSGYFR 135
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,558,218
Number of Sequences: 237096
Number of extensions: 2654123
Number of successful extensions: 5947
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5947
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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