Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13c22
(219 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 19 5.3
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 19 5.3
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 19 6.9
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 19 9.2
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 19 9.2
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 19 9.2
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 19 9.2
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 19 9.2
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 19 9.2
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 19 9.2
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 19 9.2
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 19 9.2
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 19 9.2
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 19 9.2
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 19 9.2
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 19 9.2
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 19 9.2
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 19 9.2
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 19 9.2
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 19 9.2
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 19 9.2
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 19 9.2
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 19 9.2
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 19 9.2
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 19 9.2
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 19 9.2
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 19 9.2
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 19 9.2
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 19 9.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 19 9.2
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 19 9.2
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 19 9.2
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 19 9.2
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 19.4 bits (38), Expect = 5.3
Identities = 6/20 (30%), Positives = 9/20 (45%)
Frame = -3
Query: 112 VSRHIISRFLTKTSYVKMQW 53
+ H+I F T V + W
Sbjct: 199 IGHHLIQTFAPSTLVVMLSW 218
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 19.4 bits (38), Expect = 5.3
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -3
Query: 169 HYLNKYKNKNSYIPVFIAI 113
+Y N Y N N+Y ++ I
Sbjct: 312 NYSNNYYNNNNYKKLYYNI 330
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 19.0 bits (37), Expect = 6.9
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 140 FLHPSFHSH 114
FL PS+H H
Sbjct: 311 FLPPSYHPH 319
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 50 YKNENSY 56
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 50 YKNENSY 56
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 50 YKNENSY 56
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 50 YKNENSY 56
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 50 YKNENSY 56
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 50 YKNENSY 56
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 50 YKNENSY 56
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 50 YKNENSY 56
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 50 YKNENSY 56
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 50 YKNENSY 56
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 50 YKNENSY 56
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 50 YKNENSY 56
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 50 YKNENSY 56
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 50 YKNENSY 56
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 50 YKNENSY 56
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 50 YKNENSY 56
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 283 YKNENSY 289
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 283 YKNENSY 289
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 272 YKNENSY 278
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 283 YKNENSY 289
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 283 YKNENSY 289
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 272 YKNENSY 278
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 283 YKNENSY 289
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 288 YKNENSY 294
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 283 YKNENSY 289
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -3
Query: 169 HYLNKYKNKNSY 134
+Y N Y N N+Y
Sbjct: 329 NYNNNYNNYNNY 340
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 283 YKNENSY 289
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 18.6 bits (36), Expect = 9.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 154 YKNKNSY 134
YKN+NSY
Sbjct: 283 YKNENSY 289
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 18.6 bits (36), Expect = 9.2
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = +1
Query: 133 CKNFYFCIY 159
C+NF++ IY
Sbjct: 197 CQNFFYQIY 205
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 18.6 bits (36), Expect = 9.2
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 151 KNKNSYIPVFIA 116
K KN +PVF+A
Sbjct: 549 KFKNKKLPVFLA 560
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,532
Number of Sequences: 438
Number of extensions: 1022
Number of successful extensions: 33
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used: 3281070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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