Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13c19
(445 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212; Eukar... 217 9e-56
UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6; Eukar... 172 2e-42
UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorc... 142 2e-33
UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24, puta... 138 5e-32
UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6; Eukaryo... 135 5e-31
UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2; ... 132 2e-30
UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1; Ostreoc... 130 1e-29
UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3; ... 123 2e-27
UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4; Leishm... 120 1e-26
UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containin... 120 2e-26
UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3; Trichom... 114 7e-25
UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132, w... 113 2e-24
UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillar... 103 2e-21
UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal pr... 79 6e-14
UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1; Encepha... 75 9e-13
UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 68 1e-10
UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4; Pyroba... 65 6e-10
UniRef50_A3DMS7 Cluster: 30S ribosomal protein S24e; n=1; Staphy... 62 5e-09
UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1; Thermo... 58 6e-08
UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=... 55 8e-07
UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1; Methan... 54 1e-06
UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1; Caldiv... 53 2e-06
UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1; Archae... 53 2e-06
UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2; Desulf... 52 4e-06
UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1; Nanoar... 50 2e-05
UniRef50_O26367 Cluster: 30S ribosomal protein S24e; n=3; Methan... 50 2e-05
UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3; Sulfol... 47 2e-04
UniRef50_Q8PZ95 Cluster: 30S ribosomal protein S24e; n=5; Euryar... 46 3e-04
UniRef50_Q6L0P8 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 45 8e-04
UniRef50_P19953 Cluster: 30S ribosomal protein S24e; n=6; Haloba... 44 0.002
UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1; ... 42 0.005
UniRef50_A7I4V3 Cluster: SSU ribosomal protein S24E; n=1; Candid... 40 0.018
UniRef50_P54032 Cluster: 30S ribosomal protein S24e; n=1; Methan... 40 0.018
UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1; ... 40 0.024
UniRef50_Q2FS46 Cluster: 30S ribosomal protein S24e; n=1; Methan... 38 0.074
UniRef50_A2SR72 Cluster: Ribosomal protein S24e; n=2; Methanomic... 38 0.074
UniRef50_Q08FF6 Cluster: Putative uncharacterized protein; n=2; ... 34 1.6
UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gamb... 34 1.6
UniRef50_Q5CJF6 Cluster: Delta-COP; n=2; Cryptosporidium|Rep: De... 34 1.6
UniRef50_Q5KM71 Cluster: Expressed protein; n=2; Filobasidiella ... 33 2.1
UniRef50_UPI0000ECC867 Cluster: UPI0000ECC867 related cluster; n... 33 2.8
UniRef50_Q9VT48 Cluster: CG8177-PA, isoform A; n=13; Diptera|Rep... 33 2.8
UniRef50_UPI000155D0A9 Cluster: PREDICTED: hypothetical protein;... 32 4.8
UniRef50_Q14QN3 Cluster: Hypothetical abc transporter permease c... 32 4.8
UniRef50_A7SJD3 Cluster: Predicted protein; n=1; Nematostella ve... 32 6.4
UniRef50_Q96RT9 Cluster: HBV preS1(21-47) binding protein; n=9; ... 32 6.4
UniRef50_UPI0001552B5E Cluster: PREDICTED: hypothetical protein;... 31 8.5
UniRef50_UPI0000D996D8 Cluster: PREDICTED: similar to transmembr... 31 8.5
UniRef50_Q6R7H7 Cluster: ORF47; n=1; Ostreid herpesvirus 1|Rep: ... 31 8.5
UniRef50_A5B7S2 Cluster: Putative uncharacterized protein; n=1; ... 31 8.5
UniRef50_Q6IDD5 Cluster: AT17982p; n=1; Drosophila melanogaster|... 31 8.5
UniRef50_A0EH21 Cluster: Chromosome undetermined scaffold_96, wh... 31 8.5
UniRef50_Q6ZRT7 Cluster: CDNA FLJ46115 fis, clone TESTI2037085; ... 31 8.5
UniRef50_Q9UKB5 Cluster: Adherens junction-associated protein 1;... 31 8.5
>UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212;
Eukaryota|Rep: 40S ribosomal protein S24 - Homo sapiens
(Human)
Length = 133
Score = 217 bits (530), Expect = 9e-56
Identities = 101/122 (82%), Positives = 110/122 (90%)
Frame = -3
Query: 368 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 189
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 188 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKS 9
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT K+
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 8 KV 3
V
Sbjct: 124 NV 125
>UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6;
Eukaryota|Rep: 40S ribosomal protein S24-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 172 bits (419), Expect = 2e-42
Identities = 82/126 (65%), Positives = 101/126 (80%), Gaps = 1/126 (0%)
Frame = -3
Query: 380 MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVT-PDVVFVF 204
M+E TIRTR FMTNRLLARKQ V DVLHPG+ VSK E++EKLA+MY+V P+ +F F
Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60
Query: 203 GFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 24
F+T+FGGGKS+G+ LIYDT++ AKKFEPK+RL R+GL K +RKQ KERKNR KK+R
Sbjct: 61 KFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120
Query: 23 GTKKSK 6
G KK+K
Sbjct: 121 GVKKTK 126
>UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorchis
sinensis|Rep: 40S ribosomal protein S24 - Clonorchis
sinensis
Length = 139
Score = 142 bits (345), Expect = 2e-33
Identities = 65/107 (60%), Positives = 85/107 (79%)
Frame = -3
Query: 359 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 180
IRTRKFM+NRLL R+QMV D+LHPG+ +S +IRE+LAK YK +PD+VF FGF+T+FGG
Sbjct: 7 IRTRKFMSNRLLFRRQMVVDILHPGRCVLSLKDIRERLAKTYKTSPDMVFAFGFRTHFGG 66
Query: 179 GKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 39
GKSTGFAL+YD+LD AKKFEP++RL R + P R++ +ER +
Sbjct: 67 GKSTGFALVYDSLDHAKKFEPRYRLIRVKWVAGRHPQRQKVEERTQK 113
>UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24,
putative; n=1; Plasmodium falciparum 3D7|Rep: 40S
ribosomal subunit protein S24, putative - Plasmodium
falciparum (isolate 3D7)
Length = 133
Score = 138 bits (334), Expect = 5e-32
Identities = 66/122 (54%), Positives = 90/122 (73%), Gaps = 2/122 (1%)
Frame = -3
Query: 362 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNF 186
TIR +K+M+N LL RKQ ++LHP K +V+K E++E+LAKMYK+ + + +FGFKT F
Sbjct: 6 TIRVKKYMSNPLLRRKQFALEILHPNKGSVAKKEVKERLAKMYKLNNVNTIVLFGFKTLF 65
Query: 185 GGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK-RPTRKQRKERKNRMKKVRGTKKS 9
GGG++ GF LIY +D KKFE K+RL R GL +K+ + R+ KE KNR KKVRGT+K+
Sbjct: 66 GGGRTKGFGLIYKNVDAVKKFEKKYRLVREGLIDKETKAGRRASKELKNRRKKVRGTEKT 125
Query: 8 KV 3
KV
Sbjct: 126 KV 127
>UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6;
Eukaryota|Rep: 40s ribosomal protein s24 -
Cryptosporidium parvum Iowa II
Length = 159
Score = 135 bits (326), Expect = 5e-31
Identities = 66/122 (54%), Positives = 89/122 (72%), Gaps = 2/122 (1%)
Frame = -3
Query: 362 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNF 186
T+R R+F+ N LLARKQ V DV+HP VSK++++ KLAK+YKV + + +FGFKT F
Sbjct: 33 TVRVRQFLNNPLLARKQFVVDVIHPSLGGVSKSDLKAKLAKLYKVQDANCIVLFGFKTAF 92
Query: 185 GGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPT-RKQRKERKNRMKKVRGTKKS 9
GGG+S+GF +IY+ + KKFE ++R R G+ EK T RK RKE KNR KKVRGT+K+
Sbjct: 93 GGGRSSGFCVIYNNISALKKFEHRYRQVRMGIAEKVTATGRKGRKETKNRRKKVRGTEKA 152
Query: 8 KV 3
K+
Sbjct: 153 KI 154
>UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 132 bits (320), Expect = 2e-30
Identities = 76/148 (51%), Positives = 96/148 (64%), Gaps = 29/148 (19%)
Frame = -3
Query: 362 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 186
T+RTRKFMTNRLL+RKQ V +VLHPG+ VSK +++EKLAK+Y+V + +FVF F+T+F
Sbjct: 11 TLRTRKFMTNRLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRTHF 70
Query: 185 GGGKSTGFALIYDTLDLAKKFEPKHRLAR-------HGLYEKK----------------- 78
GGGKSTGF LIYD LD AKK+EPK+RL R +G + +
Sbjct: 71 GGGKSTGFGLIYDNLDAAKKYEPKYRLIRVQLLSVGNGCFVSRGVLGIPCEVRFGNLNGL 130
Query: 77 -RPTRKQRK---ERKNRMKKVRGTKKSK 6
K RK ERKNR KK+RG KK+K
Sbjct: 131 ATKVEKSRKQMKERKNRAKKIRGVKKTK 158
>UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S24 -
Ostreococcus tauri
Length = 134
Score = 130 bits (315), Expect = 1e-29
Identities = 72/133 (54%), Positives = 89/133 (66%), Gaps = 20/133 (15%)
Frame = -3
Query: 341 MTNRLLARKQMV-----------CDVLHPGKPTVSK--------TEIREKLAKMYKVTPD 219
MTNRLL R+Q V CDVLHPG+ VSK E++EK+AKMY V+ +
Sbjct: 1 MTNRLLQRRQFVRLTNVFHQSQICDVLHPGRANVSKVRYIRGAGAELQEKIAKMYNVSDE 60
Query: 218 -VVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKN 42
V +FGF+T FGGGKSTGF LIYD +D KKFEPKHRL R GL + + +RK KE+KN
Sbjct: 61 KCVSIFGFRTAFGGGKSTGFGLIYDNIDAFKKFEPKHRLIRAGLKDAVQKSRKNIKEKKN 120
Query: 41 RMKKVRGTKKSKV 3
R+KK+RG K+KV
Sbjct: 121 RVKKLRGGAKNKV 133
>UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S24 - Entamoeba histolytica HM-1:IMSS
Length = 140
Score = 123 bits (296), Expect = 2e-27
Identities = 63/120 (52%), Positives = 77/120 (64%), Gaps = 1/120 (0%)
Frame = -3
Query: 362 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNF 186
TIRTR + N LL RKQ+V D+ HPG TEI+EKLAKMYKV + + GF T +
Sbjct: 9 TIRTRNLIVNPLLCRKQVVVDIYHPGIVQPKFTEIKEKLAKMYKVKDVQTIVLNGFVTKY 68
Query: 185 GGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 6
GGGK++GFALIYDTL KKF PKH+L R GL +K + RK RKE K + + K K
Sbjct: 69 GGGKTSGFALIYDTLSALKKFVPKHQLIRAGLDKKTKAPRKARKEHKKKWRMCHSFKDYK 128
>UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4;
Leishmania|Rep: 40S ribosomal protein S24e - Leishmania
major
Length = 137
Score = 120 bits (290), Expect = 1e-26
Identities = 66/130 (50%), Positives = 82/130 (63%), Gaps = 3/130 (2%)
Frame = -3
Query: 386 FKMSEGTATIRTRKFMTNRLLARKQMVCDVLHPGK-PTVSKTEIREKLAKMYKVTPDV-- 216
F+ + IRT +F N+LL RKQ + +V HP TV IR+KLA +YKV PD
Sbjct: 3 FQKKKAEVCIRTSQFKVNKLLNRKQFIVEVNHPHWCGTVPTQLIRKKLATLYKV-PDASQ 61
Query: 215 VFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRM 36
V +FGFKT FGGGK+TGF LIYD L K+FEP +R R G + + P RK KER+NR
Sbjct: 62 VSLFGFKTKFGGGKTTGFGLIYDDLASLKRFEPNYRKTRMGFGKARLPARKSVKERRNRN 121
Query: 35 KKVRGTKKSK 6
KK+RG K K
Sbjct: 122 KKLRGKAKGK 131
>UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S24e containing protein - Tetrahymena
thermophila SB210
Length = 149
Score = 120 bits (288), Expect = 2e-26
Identities = 58/122 (47%), Positives = 79/122 (64%)
Frame = -3
Query: 368 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 189
T IRT+K + N LL+R+Q+ DVLHP PT SK +IRE+LAK KV V V+GF T
Sbjct: 2 TIVIRTKKILVNPLLSRRQLSLDVLHPDSPTASKEKIREELAKQLKVDARNVVVYGFSTQ 61
Query: 188 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKS 9
+GGGKSTGFAL+YD K+EP +RL + + +K TR+ KE K ++K+ G +
Sbjct: 62 YGGGKSTGFALVYDNQQYLLKYEPNYRLRKVKILGEKPNTRRSFKELKRKIKRTSGKAIT 121
Query: 8 KV 3
K+
Sbjct: 122 KL 123
>UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S24
- Trichomonas vaginalis G3
Length = 140
Score = 114 bits (275), Expect = 7e-25
Identities = 52/117 (44%), Positives = 76/117 (64%)
Frame = -3
Query: 362 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 183
++ RK++ N+LL RKQ V D+ H G ++ EI++++A K D+V +FG +T FG
Sbjct: 5 SVHIRKYIVNKLLDRKQFVIDMQHLGAKAPTRDEIKDEVASRLKANKDLVVIFGLETKFG 64
Query: 182 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKK 12
GG +TGF +YD+LD KK EPKHRL + GL EK + TR+ RK + + KV G+ K
Sbjct: 65 GGHTTGFGFVYDSLDALKKTEPKHRLIKAGLAEKGKVTRRMRKNARRQKVKVWGSGK 121
>UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 182
Score = 113 bits (272), Expect = 2e-24
Identities = 55/123 (44%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Frame = -3
Query: 368 TATIRTRKFMTNRLLA-RKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKT 192
T ++TRK + + L R+Q+ ++LHP KPT S+ + ++LA YK V V+G +T
Sbjct: 34 TFIVKTRKVLLKQSLEIRRQLSVELLHPNKPTPSQESVVKELASKYKADERNVVVYGLRT 93
Query: 191 NFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKK 12
FGG ++TGFALIYDT KFEPK RL R G+ K+ +RK KE K+++KK RG +K
Sbjct: 94 TFGGNRTTGFALIYDTQQYLLKFEPKFRLRRRGIIPKRDGSRKGWKEVKSKLKKTRGAEK 153
Query: 11 SKV 3
+K+
Sbjct: 154 TKI 156
>UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillardia
theta|Rep: 40S ribosomal protein S24 - Guillardia theta
(Cryptomonas phi)
Length = 129
Score = 103 bits (246), Expect = 2e-21
Identities = 50/116 (43%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
Frame = -3
Query: 359 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVT-PDVVFVFGFKTNFG 183
++T+KF N LL RKQ + + K +SK +R +L+K Y++ P ++F+FG K NFG
Sbjct: 10 LKTKKFKNNPLLKRKQFLLSIDRKKKFNISKEWLRIELSKYYRIKDPSLIFIFGLKNNFG 69
Query: 182 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTK 15
G K + F IY L+ A+ EPKHRL ++ L + + + KQRKE+KN+MKK G K
Sbjct: 70 GFKCSAFVYIYYNLEAARVNEPKHRLIKNNLMKLELQSSKQRKEKKNKMKKYFGNK 125
>UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal
protein S19; n=1; Xenopus laevis|Rep: Fragment of
Xenopus laevis ribosomal protein S19 - Xenopus laevis
(African clawed frog)
Length = 142
Score = 78.6 bits (185), Expect = 6e-14
Identities = 44/116 (37%), Positives = 68/116 (58%)
Frame = +3
Query: 21 TTDLLHSVLTFFTLFARGPLLLVQAVAS*PVLGFELLGQIECVVDQSESS*LATSEVCLE 200
T LHSVL FFTL + LL++ + V L ++ VVD +++ ATS+V +
Sbjct: 17 TPYFLHSVLAFFTLLSGSLFLLIKPMLGKSVFRLILFCIVKRVVDHAKACSFATSKVSPK 76
Query: 201 TEYEHYIGSNLVHFGELLTDLGLADGWFSWM*DIANHLLARQQSVGHEFASANSRC 368
T++++ I LVH +L +D L D F+WM I +HLLA Q+SV H+ + ++S C
Sbjct: 77 TKHKNNIWGCLVHLCQLFSDFSLGDSSFAWMKYINDHLLALQKSVCHKLSCSDSHC 132
>UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S24
- Encephalitozoon cuniculi
Length = 126
Score = 74.5 bits (175), Expect = 9e-13
Identities = 39/108 (36%), Positives = 61/108 (56%)
Frame = -3
Query: 335 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 156
NRLL+RK++ HPG P SK EIREK++++Y+ D V V K +G ++T A
Sbjct: 8 NRLLSRKELDVVAYHPGMPIPSKEEIREKISELYQTKKDNVVVMDLKNRYGTHRTTLKAK 67
Query: 155 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKK 12
IY ++++ E KH +A+ E R+ RK+ + + K+ GT K
Sbjct: 68 IYSSIEVLSNIEKKHIVAKLTGKEFHVTPRRVRKDERKKRYKIFGTLK 115
>UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4;
Thermococcaceae|Rep: 30S ribosomal protein S24e -
Pyrococcus abyssi
Length = 99
Score = 67.7 bits (158), Expect = 1e-10
Identities = 31/94 (32%), Positives = 53/94 (56%)
Frame = -3
Query: 359 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 180
I+ + N+L+ RK++ ++ HPG+PT S+ +++ KL M + P+ + ++ FG
Sbjct: 3 IKITEVKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDLNPETTVIQYIRSYFGS 62
Query: 179 GKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK 78
KS G+A Y D EP++ L R G+ EKK
Sbjct: 63 YKSKGYAKYYYDKDRMLYIEPEYILIRDGIIEKK 96
>UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S24e -
Pyrobaculum aerophilum
Length = 121
Score = 65.3 bits (152), Expect = 6e-10
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Frame = -3
Query: 335 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 156
N+LLAR++++ + +H T ++ +RE +AK + VFV KT FG G+S
Sbjct: 14 NKLLARRELLVEAVHQNASTPTRQSVREWVAKQLGIDISNVFVRRIKTEFGRGRSLAEVH 73
Query: 155 IYDTLDLAKKFEPKHRLARH------GLYEKKRPTRKQRKERKNRMKK 30
+Y+ +A+ EP + LAR+ L E+ + R +R+E+K R KK
Sbjct: 74 VYNDSKIARVIEPLYILARNLGEEGKKLLEEAKKRRNERREKKKRKKK 121
>UniRef50_A3DMS7 Cluster: 30S ribosomal protein S24e; n=1;
Staphylothermus marinus F1|Rep: 30S ribosomal protein
S24e - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 118
Score = 62.1 bits (144), Expect = 5e-09
Identities = 37/112 (33%), Positives = 60/112 (53%)
Frame = -3
Query: 383 KMSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVF 204
K+ E T I K+ N L+ R+++V + H GK T S+ IR + AK+Y V + V+V
Sbjct: 6 KIGEFTGEIVVDKY--NPLVKRREVVIRIAHIGKSTPSRGLIRHETAKIYGVEVEKVYVR 63
Query: 203 GFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKER 48
T +G G S IYD+++ AK+FEP + + R+ + + KE+
Sbjct: 64 EINTEYGLGVSNATIHIYDSVERAKQFEPPYVIKRNEYASQSYQLEQMMKEQ 115
>UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein
S24e - Thermofilum pendens (strain Hrk 5)
Length = 106
Score = 58.4 bits (135), Expect = 6e-08
Identities = 29/102 (28%), Positives = 54/102 (52%)
Frame = -3
Query: 365 ATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNF 186
+++R + N+L+ R++++ ++ H G T S+ ++ E L M + V T +
Sbjct: 4 SSLRIIQEKVNKLVGRRELLVEIHHQGSGTPSRRDVAEALRNMLGTGGSAIVVRKLVTRY 63
Query: 185 GGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQ 60
G G S IYD+ K FEPKH L R+GL +++ +++
Sbjct: 64 GQGVSEALIHIYDSDVKMKMFEPKHILRRNGLIQEQEAKKQE 105
>UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S24E-like protein - Metallosphaera sedula DSM 5348
Length = 113
Score = 54.8 bits (126), Expect = 8e-07
Identities = 25/79 (31%), Positives = 41/79 (51%)
Frame = -3
Query: 335 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 156
N+++ RK++ V H G PT S+ +IR+ ++ D+V + T +G G S
Sbjct: 23 NKVIGRKEIKIKVYHIGSPTPSRADIRKAISSFIGAKEDLVVIRKINTGYGAGISEATIH 82
Query: 155 IYDTLDLAKKFEPKHRLAR 99
+Y D+ KFEP H + R
Sbjct: 83 VYSEKDVLSKFEPAHLVNR 101
>UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S24e -
Methanopyrus kandleri
Length = 116
Score = 54.0 bits (124), Expect = 1e-06
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = -3
Query: 335 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 156
N LL RK++ V H T K+E+ KLA + V +VV + ++ FG ++ G+A
Sbjct: 11 NPLLYRKEVKFVVRHEDSGTPQKSEVLRKLAAILDVDKEVVLIDRMESEFGKRETKGYAK 70
Query: 155 IYDTLDLAKKFEPKHRLARH 96
IY +++ + EP+H + RH
Sbjct: 71 IYKSMEHLEDIEPEHMVERH 90
>UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1;
Caldivirga maquilingensis IC-167|Rep: 30S ribosomal
protein S24e - Caldivirga maquilingensis IC-167
Length = 155
Score = 53.2 bits (122), Expect = 2e-06
Identities = 32/114 (28%), Positives = 55/114 (48%)
Frame = -3
Query: 371 GTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKT 192
G ++ + N LL RK++ V H G PT + ++RE+LAK P++ +V T
Sbjct: 36 GKVQVKVIEQFNNPLLQRKEVKAIVYHVGLPTPQRLQLREELAKALGSNPELTYVTHVYT 95
Query: 191 NFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 30
+G G S +Y + A+ EP + R+ ++ + R + K R+ KK
Sbjct: 96 QYGVGVSRIEVHVYFDKNTAELVEPLYVRLRNMPKDQAKKIRDELKSRRKSEKK 149
>UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S24e -
Archaeoglobus fulgidus
Length = 110
Score = 53.2 bits (122), Expect = 2e-06
Identities = 29/85 (34%), Positives = 49/85 (57%)
Frame = -3
Query: 335 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 156
N LL R+++ C + GK T S+ E+R K+A + P+ V V KT FG ++ +
Sbjct: 14 NPLLRRREVYCRLSFEGK-TPSRKEVRGKIAGLMNAEPERVVVDYIKTEFGKTEAKCYVK 72
Query: 155 IYDTLDLAKKFEPKHRLARHGLYEK 81
IYDT++ +K E +H + R+ + E+
Sbjct: 73 IYDTVEDLQKIEEEHIIERNKVEEQ 97
>UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S24e -
Aeropyrum pernix
Length = 118
Score = 52.4 bits (120), Expect = 4e-06
Identities = 27/81 (33%), Positives = 47/81 (58%)
Frame = -3
Query: 335 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 156
N L+ R+++V + H KPT + +R+KLA++ V +++ KT +G G S
Sbjct: 28 NPLVKRREIVMILHHELKPTPMRIMLRQKLAEVLGVDIKRIYIRYIKTGYGAGLSKVRVH 87
Query: 155 IYDTLDLAKKFEPKHRLARHG 93
+YD+ + A FEPK+ + R+G
Sbjct: 88 VYDSPERALSFEPKYIIERNG 108
>UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S24e -
Nanoarchaeum equitans
Length = 94
Score = 50.4 bits (115), Expect = 2e-05
Identities = 26/82 (31%), Positives = 45/82 (54%)
Frame = -3
Query: 335 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 156
N+L R + + V HP + T ++ E +EK+A+M V + + + + +G S +A
Sbjct: 12 NKLFDRTEYIIQVEHPKEKTPTREEAKEKIAEMLNVDKNKLVIKKIVSKYGLPYSFIYAR 71
Query: 155 IYDTLDLAKKFEPKHRLARHGL 90
+YD +D AK+ E K L R+ L
Sbjct: 72 VYDNIDTAKRVELKQILRRNNL 93
>UniRef50_O26367 Cluster: 30S ribosomal protein S24e; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S24e -
Methanobacterium thermoautotrophicum
Length = 100
Score = 50.0 bits (114), Expect = 2e-05
Identities = 24/80 (30%), Positives = 44/80 (55%)
Frame = -3
Query: 335 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 156
N LL RK++ + L+ G+ T E++ KL M D++ V FG ++TG+A
Sbjct: 11 NPLLNRKEIRFECLYEGESTPKVLEVKNKLVAMLDADKDLLVVDKIDQGFGEPRATGYAK 70
Query: 155 IYDTLDLAKKFEPKHRLARH 96
IY++ + + EP+H + ++
Sbjct: 71 IYESAEKLTEIEPEHVIKKN 90
>UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3;
Sulfolobus|Rep: 30S ribosomal protein S24e - Sulfolobus
tokodaii
Length = 120
Score = 47.2 bits (107), Expect = 2e-04
Identities = 29/111 (26%), Positives = 56/111 (50%)
Frame = -3
Query: 383 KMSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVF 204
K+SE I R + N ++ R+++ V H G T+S+ ++ + +A Y D+V +
Sbjct: 10 KISEKAEGIVERD-IKNNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQEDLVVIK 68
Query: 203 GFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKE 51
T +G G S A IY+ ++FEP++ + R + K+ + +K+
Sbjct: 69 KIHTLYGAGISYVRANIYNDKKTLQEFEPQYLIGRDTGQKVKKGGKGAQKQ 119
>UniRef50_Q8PZ95 Cluster: 30S ribosomal protein S24e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S24e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 101
Score = 46.4 bits (105), Expect = 3e-04
Identities = 27/90 (30%), Positives = 49/90 (54%)
Frame = -3
Query: 359 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 180
I+ K N LL R+++ V + G T S+ ++R KLA M +++ + KT +G
Sbjct: 3 IKIIKDKKNPLLNRRELDFIVKYEGS-TPSRNDVRNKLAAMLNAPLELLVIQRIKTEYGM 61
Query: 179 GKSTGFALIYDTLDLAKKFEPKHRLARHGL 90
+S G+A +Y+ D K+ E ++ L R+ +
Sbjct: 62 QESKGYAKLYEDADRMKQVEQEYVLKRNAV 91
>UniRef50_Q6L0P8 Cluster: 30S ribosomal protein S24e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S24e -
Picrophilus torridus
Length = 102
Score = 44.8 bits (101), Expect = 8e-04
Identities = 27/86 (31%), Positives = 44/86 (51%)
Frame = -3
Query: 335 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 156
N+LL RK++ + T S+ +IR+ LA Y ++ V + G + G+A
Sbjct: 14 NKLLFRKEINYTIKFENDKTPSREDIRKLLANNYGSDESLIIVDKNRQETGKHEIKGYAK 73
Query: 155 IYDTLDLAKKFEPKHRLARHGLYEKK 78
IYDT + A +EP + L R+ L K+
Sbjct: 74 IYDTKEHAMLYEPDYELFRNKLKVKE 99
>UniRef50_P19953 Cluster: 30S ribosomal protein S24e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S24e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 102
Score = 43.6 bits (98), Expect = 0.002
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = -3
Query: 335 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 156
N +L R + +V+H + T S+ +R+ LA + V + T FG K+ G+A
Sbjct: 11 NPMLHRTDVRFEVVHD-EATPSRLSVRDSLAATLNKDAEEVVIHKLDTKFGMRKTVGYAK 69
Query: 155 IYDTLDLAKKFEPKHRLARH 96
+YD + A+ E H L R+
Sbjct: 70 VYDNPEYARDVEQDHMLERN 89
>UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
T26G10.3 - Caenorhabditis elegans
Length = 91
Score = 42.3 bits (95), Expect = 0.005
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -3
Query: 311 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVV 213
MV +V+ PG+PT K +IREK+A Y + PD +
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPDTM 33
>UniRef50_A7I4V3 Cluster: SSU ribosomal protein S24E; n=1;
Candidatus Methanoregula boonei 6A8|Rep: SSU ribosomal
protein S24E - Methanoregula boonei (strain 6A8)
Length = 99
Score = 40.3 bits (90), Expect = 0.018
Identities = 26/79 (32%), Positives = 40/79 (50%)
Frame = -3
Query: 335 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 156
N LL+R+++ + + G T S+ +I KL + +V + K+NFG G A
Sbjct: 11 NELLSRREIAFTLTYDGA-TPSRLQIIGKLCALLNTKDPLVVLDSLKSNFGKMVIVGKAR 69
Query: 155 IYDTLDLAKKFEPKHRLAR 99
IYD+ D KK E + AR
Sbjct: 70 IYDSEDAKKKTEHPYLSAR 88
>UniRef50_P54032 Cluster: 30S ribosomal protein S24e; n=1;
Methanocaldococcus jannaschii|Rep: 30S ribosomal protein
S24e - Methanococcus jannaschii
Length = 101
Score = 40.3 bits (90), Expect = 0.018
Identities = 25/85 (29%), Positives = 44/85 (51%)
Frame = -3
Query: 335 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 156
N LL RK+ V H G PT + +++ KLA + D++ V G ++ G+A
Sbjct: 11 NPLLKRKEYRFIVDHDG-PTPTFKDVKLKLAAILNANKDLLIVEKIVEEAGMQRARGYAK 69
Query: 155 IYDTLDLAKKFEPKHRLARHGLYEK 81
+YD ++ K E +H L ++ + E+
Sbjct: 70 LYDNEEMLKLVEREHILRKNKIEEE 94
>UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 204
Score = 39.9 bits (89), Expect = 0.024
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -3
Query: 167 GFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 39
GF L+YDT D A K++P+H + H R + +RKE++ R
Sbjct: 54 GFTLVYDTFDFANKYQPEHS-SNHDGASTSRTSISRRKEKRRR 95
>UniRef50_Q2FS46 Cluster: 30S ribosomal protein S24e; n=1;
Methanospirillum hungatei JF-1|Rep: 30S ribosomal
protein S24e - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 112
Score = 38.3 bits (85), Expect = 0.074
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = -3
Query: 335 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 156
N LL RK++ + G T S+ + KLA M D + + FG + TG A
Sbjct: 11 NVLLNRKEIGFSITFTGA-TPSRKMVHAKLAAMLSAPKDQLVIGSLHNRFGLTEITGDAR 69
Query: 155 IYDTLDLAKKFEPKH 111
+Y + + KK EP++
Sbjct: 70 VYTSAEYLKKIEPEY 84
>UniRef50_A2SR72 Cluster: Ribosomal protein S24e; n=2;
Methanomicrobiales|Rep: Ribosomal protein S24e -
Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 97
Score = 38.3 bits (85), Expect = 0.074
Identities = 24/79 (30%), Positives = 39/79 (49%)
Frame = -3
Query: 335 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 156
N LL+R ++ + G T ++++I K+A M + + + K FG TG A
Sbjct: 11 NELLSRNELAFTASYDGA-TPARSDIGAKIAAMQNTPVENLILSPLKGRFGTRAVTGVAR 69
Query: 155 IYDTLDLAKKFEPKHRLAR 99
IYDT + K E + +AR
Sbjct: 70 IYDTPEALKATEREFLIAR 88
>UniRef50_Q08FF6 Cluster: Putative uncharacterized protein; n=2;
Mule deer poxvirus|Rep: Putative uncharacterized protein
- Deerpox virus W-1170-84
Length = 129
Score = 33.9 bits (74), Expect = 1.6
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = -3
Query: 284 KPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRL 105
KPT+ + ++ EKL K YK + F+ F T F +I D K+F K+
Sbjct: 37 KPTMDRIDLAEKLIKKYKDIRSLYFLLNI---FREMPDTEF-VIKQLSDYIKRFNRKYLE 92
Query: 104 ARHGLYEKKRPT--RKQRKERKNRMKKVRGTKKSKV 3
+ K +PT RK R + +K++ ++K ++
Sbjct: 93 QNDTTFGKTQPTIKRKHRFRNMDVLKRLSCSEKRRL 128
>UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000021262 - Anopheles gambiae
str. PEST
Length = 1960
Score = 33.9 bits (74), Expect = 1.6
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = +1
Query: 154 IKANPVDLPPPKFVLKPNTNTTSGVTLYILASFSRISVLLTVGFPGCKTSQTICLRANNL 333
+ A V PP+ V KP TN + TL +L F+ + ++ G P K+++ + + N
Sbjct: 1 MSAFEVSCTPPRAVAKPRTNESREPTLVLLGPFTPKATVVFEGVPVGKSARRLLIVRNTN 60
Query: 334 LVMNLRVRIVAVP 372
+ ++V + VP
Sbjct: 61 KTL-VQVNLTRVP 72
>UniRef50_Q5CJF6 Cluster: Delta-COP; n=2; Cryptosporidium|Rep:
Delta-COP - Cryptosporidium hominis
Length = 535
Score = 33.9 bits (74), Expect = 1.6
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = -3
Query: 221 DVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKN 42
DV+F F +FG +S + I L++ + E H+L R K+ +++R+ N
Sbjct: 113 DVIFAFDEIVSFGYRESINLSQIKTCLEMESQEEKLHKLIRQ---NKENEEKERRRHIAN 169
Query: 41 RMKKVRGTKKS 9
R+ K R T ++
Sbjct: 170 RLDKERVTNEA 180
>UniRef50_Q5KM71 Cluster: Expressed protein; n=2; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 548
Score = 33.5 bits (73), Expect = 2.1
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +2
Query: 20 YHGPSSFCSYVLYAVC--AWASSSRTGRGELTCAWVRTSWP 136
Y S C L+A C WA +++ ++TC W R WP
Sbjct: 452 YDDSLSGCGRPLHAECFRMWAVTAKKSGKDVTCVWCRNEWP 492
>UniRef50_UPI0000ECC867 Cluster: UPI0000ECC867 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECC867 UniRef100 entry -
Gallus gallus
Length = 219
Score = 33.1 bits (72), Expect = 2.8
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 86 EKKRPTRKQRKERKNRMKKVRGTKKSK 6
E+KR RK+RKERK + KK + K+ K
Sbjct: 62 ERKRKERKERKERKRKKKKEKERKRKK 88
>UniRef50_Q9VT48 Cluster: CG8177-PA, isoform A; n=13; Diptera|Rep:
CG8177-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 1268
Score = 33.1 bits (72), Expect = 2.8
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = -3
Query: 188 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 30
FGG K +L YD + E K R +RH Y +++ + + E KN++++
Sbjct: 133 FGGKKKIPPSLSYDEQPTDQSHERKRRRSRHQYYRQRKFSHQDSVEPKNKLEE 185
>UniRef50_UPI000155D0A9 Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 214
Score = 32.3 bits (70), Expect = 4.8
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3
Query: 131 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 6
+K E K R E+KR ++++KERK R K+ + KK +
Sbjct: 97 RKRERKRERKRERKRERKRERKREKKERKERKKEKKERKKER 138
>UniRef50_Q14QN3 Cluster: Hypothetical abc transporter permease
component transmembrane protein; n=1; Spiroplasma
citri|Rep: Hypothetical abc transporter permease
component transmembrane protein - Spiroplasma citri
Length = 1415
Score = 32.3 bits (70), Expect = 4.8
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -3
Query: 326 LARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYD 147
L + +V D L+ GK +KT+I K A +Y + + +F F G G S YD
Sbjct: 783 LTKNSLVSDYLYNGKWLSTKTDISAKNAHLYAQQLNNMIIFNFMV--GKGASLSIGTFYD 840
>UniRef50_A7SJD3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 353
Score = 31.9 bits (69), Expect = 6.4
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 216 YIGSNLVHFGELLTDLGLADGWFSWM*DIANHLLARQQSVGHEFASANS 362
+I N +F + DLG+A + + + +H L R Q+VGH FA S
Sbjct: 251 FIDFNDFYFSNRVVDLGIALAYIMMLPQVNSH-LTRPQAVGHMFAGYQS 298
>UniRef50_Q96RT9 Cluster: HBV preS1(21-47) binding protein; n=9;
Eukaryota|Rep: HBV preS1(21-47) binding protein - Homo
sapiens (Human)
Length = 42
Score = 31.9 bits (69), Expect = 6.4
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -3
Query: 86 EKKRPTRKQRKERKNRMKKVRGTKKSK 6
E+K+ +K++KERK R KK + KK K
Sbjct: 6 ERKKERKKEKKERKKRKKKEKERKKEK 32
>UniRef50_UPI0001552B5E Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 181
Score = 31.5 bits (68), Expect = 8.5
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3
Query: 122 EPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 6
E K + + EKK K+ KE+K +MKK + KK K
Sbjct: 64 EKKEKKEKKEKKEKKEKKEKKEKEKKEKMKKKKKKKKKK 102
>UniRef50_UPI0000D996D8 Cluster: PREDICTED: similar to transmembrane
protein SHREW1; n=1; Macaca mulatta|Rep: PREDICTED:
similar to transmembrane protein SHREW1 - Macaca mulatta
Length = 498
Score = 31.5 bits (68), Expect = 8.5
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -2
Query: 141 RSGQEVRTQAQVSSPRPVREEEAHAQ 64
RSGQ R A V SPRP R E H Q
Sbjct: 161 RSGQPARVPAPVWSPRPPRVERIHGQ 186
>UniRef50_Q6R7H7 Cluster: ORF47; n=1; Ostreid herpesvirus 1|Rep:
ORF47 - Ostreid herpesvirus 1
Length = 1412
Score = 31.5 bits (68), Expect = 8.5
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = -3
Query: 236 YKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHG 93
YK+ P + F G T FG ST L Y L A K + KH + G
Sbjct: 452 YKIRPPIYFTSGSDTQFGSISSTASPLSY-ILSPAIKSDEKHTMVWRG 498
>UniRef50_A5B7S2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 421
Score = 31.5 bits (68), Expect = 8.5
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -2
Query: 216 SVRIRFQDKLRRWQVNWIRFDLRHT-RSGQEVRTQAQVSSPRP 91
S ++R D+L++W V+++ F++R T RSG T + V P
Sbjct: 77 SFQLRIADRLKQWIVDFLSFEMRMTSRSGSGTATGSGVXGQDP 119
>UniRef50_Q6IDD5 Cluster: AT17982p; n=1; Drosophila
melanogaster|Rep: AT17982p - Drosophila melanogaster
(Fruit fly)
Length = 184
Score = 31.5 bits (68), Expect = 8.5
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -3
Query: 134 AKKFEPKHR--LARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 3
A+K KH+ L++ Y +KRP RK K R KK R +K +K+
Sbjct: 68 ARKSGKKHKMHLSKASTYGRKRPARKVTKRRDVINKKPRKSKGTKI 113
>UniRef50_A0EH21 Cluster: Chromosome undetermined scaffold_96, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_96,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 31.5 bits (68), Expect = 8.5
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = -3
Query: 131 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 6
KK+E K+ + G +K + +K++K +KN+ KK + KKSK
Sbjct: 245 KKYEKKNSEEK-GKEKKIKKEKKEKKNKKNKDKKEKKEKKSK 285
>UniRef50_Q6ZRT7 Cluster: CDNA FLJ46115 fis, clone TESTI2037085;
n=6; Fungi/Metazoa group|Rep: CDNA FLJ46115 fis, clone
TESTI2037085 - Homo sapiens (Human)
Length = 148
Score = 31.5 bits (68), Expect = 8.5
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -3
Query: 131 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 6
KK + K + + +KK+ +K++K++KN+ KK + KK K
Sbjct: 37 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKK 78
>UniRef50_Q9UKB5 Cluster: Adherens junction-associated protein 1;
n=14; Tetrapoda|Rep: Adherens junction-associated
protein 1 - Homo sapiens (Human)
Length = 411
Score = 31.5 bits (68), Expect = 8.5
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -2
Query: 141 RSGQEVRTQAQVSSPRPVREEEAHAQ 64
RSGQ R A V SPRP R E H Q
Sbjct: 67 RSGQPARVPAPVWSPRPPRVERIHGQ 92
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 465,960,744
Number of Sequences: 1657284
Number of extensions: 9417196
Number of successful extensions: 32329
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 30285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32089
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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