Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13c19
(445 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12202-2|AAB08007.1| 130|Homo sapiens ribosomal protein S24 pro... 217 1e-56
U12202-1|AAB08006.1| 133|Homo sapiens ribosomal protein S24 pro... 217 1e-56
M31520-2|AAA36588.1| 133|Homo sapiens ribosomal protein S24 pro... 217 1e-56
BC071926-1|AAH71926.1| 130|Homo sapiens ribosomal protein S24 p... 217 1e-56
BC000523-1|AAH00523.1| 130|Homo sapiens ribosomal protein S24 p... 217 1e-56
AL512628-3|CAI16468.1| 133|Homo sapiens ribosomal protein S24 p... 217 1e-56
AL512628-2|CAI16467.1| 130|Homo sapiens ribosomal protein S24 p... 217 1e-56
BX537975-1|CAD97939.1| 132|Homo sapiens hypothetical protein pr... 215 4e-56
BC004173-1|AAH04173.1| 1500|Homo sapiens ANKRD17 protein protein. 35 0.15
BC048271-1|AAH48271.1| 611|Homo sapiens ZC3H11A protein protein. 33 0.34
AF271256-1|AAK58397.1| 42|Homo sapiens HBV preS1(21-47) bindin... 32 1.0
Z98886-1|CAI22750.1| 411|Homo sapiens adherens junction associa... 31 1.4
AY282806-1|AAP35025.1| 411|Homo sapiens transmembrane protein S... 31 1.4
AL391808-1|CAH72438.1| 411|Homo sapiens adherens junction assoc... 31 1.4
AL023586-1|CAI20566.1| 411|Homo sapiens adherens junction assoc... 31 1.4
AK127997-1|BAC87222.1| 148|Homo sapiens protein ( Homo sapiens ... 31 1.4
AF175409-1|AAD53278.1| 411|Homo sapiens unknown protein. 31 1.4
U91930-1|AAD03777.1| 1112|Homo sapiens AP-3 complex delta subuni... 31 1.8
AC005545-2|AAC34214.1| 1079|Homo sapiens AP-3 complex delta subu... 31 1.8
AB208804-1|BAD92041.1| 1284|Homo sapiens Adapter-related protein... 31 1.8
AK000295-1|BAA91063.1| 686|Homo sapiens protein ( Homo sapiens ... 31 2.4
BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat tra... 30 3.1
BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat tra... 30 3.1
AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat tra... 30 3.1
AB014597-1|BAA31672.2| 2486|Homo sapiens KIAA0697 protein protein. 30 3.1
AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein. 30 3.1
AB231746-1|BAE17134.1| 567|Homo sapiens hypothetical protein pr... 30 4.1
Z84487-2|CAI42674.1| 2492|Homo sapiens alpha thalassemia/mental ... 29 5.5
Z84487-1|CAI42675.1| 2454|Homo sapiens alpha thalassemia/mental ... 29 5.5
U97103-1|AAC51657.1| 2375|Homo sapiens X-linked nuclear protein ... 29 5.5
U75653-1|AAC51655.1| 2492|Homo sapiens zinc finger helicase prot... 29 5.5
U72938-1|AAB49971.2| 2454|Homo sapiens putative DNA dependent AT... 29 5.5
U72937-1|AAB49970.2| 2492|Homo sapiens putative DNA dependent AT... 29 5.5
U72936-1|AAB49969.1| 2288|Homo sapiens putative DNA dependent AT... 29 5.5
U72935-3|AAB40700.1| 2288|Homo sapiens putative DNA dependent AT... 29 5.5
U72935-2|AAB40699.1| 2337|Homo sapiens putative DNA dependent AT... 29 5.5
U72935-1|AAB40698.1| 2375|Homo sapiens putative DNA dependent AT... 29 5.5
U09820-1|AAC50069.1| 1641|Homo sapiens helicase II protein. 29 5.5
EF467914-1|ABO43036.1| 2492|Homo sapiens alpha thalassemia/menta... 29 5.5
BC130280-1|AAI30281.1| 1621|Homo sapiens ABCA8 protein protein. 29 5.5
AL121874-2|CAI40710.1| 2492|Homo sapiens alpha thalassemia/menta... 29 5.5
AL121874-1|CAB90351.2| 2454|Homo sapiens alpha thalassemia/menta... 29 5.5
AL109753-2|CAI43115.1| 2492|Homo sapiens alpha thalassemia/menta... 29 5.5
AL109753-1|CAI43116.1| 2454|Homo sapiens alpha thalassemia/menta... 29 5.5
AK025632-1|BAB15196.1| 720|Homo sapiens protein ( Homo sapiens ... 29 5.5
AB231747-1|BAE17135.1| 490|Homo sapiens hypothetical protein pr... 29 5.5
AB209545-1|BAD92782.1| 1224|Homo sapiens transcriptional regulat... 29 5.5
AB208928-1|BAD92165.1| 1383|Homo sapiens transcriptional regulat... 29 5.5
AB102641-1|BAC81110.1| 2492|Homo sapiens ATRX protein. 29 5.5
AB020629-1|BAA74845.2| 1591|Homo sapiens KIAA0822 protein protein. 29 5.5
BC127700-1|AAI27701.1| 520|Homo sapiens INSC protein protein. 29 7.2
AK025859-1|BAB15260.1| 460|Homo sapiens protein ( Homo sapiens ... 29 7.2
AB236159-1|BAE93464.1| 579|Homo sapiens Inscuteable long form p... 29 7.2
AB236158-1|BAE93463.1| 532|Homo sapiens Inscuteable short form ... 29 7.2
AB231745-1|BAE17133.1| 532|Homo sapiens hypothetical protein pr... 29 7.2
BC146790-1|AAI46791.1| 1460|Homo sapiens centrosomal protein 170... 29 9.6
AL606534-4|CAI12944.1| 1584|Homo sapiens centrosomal protein 170... 29 9.6
AL606534-3|CAI12943.1| 1486|Homo sapiens centrosomal protein 170... 29 9.6
AL606534-2|CAI12945.1| 1460|Homo sapiens centrosomal protein 170... 29 9.6
AL606534-1|CAI12942.1| 1557|Homo sapiens centrosomal protein 170... 29 9.6
AF521883-1|AAO14944.1| 2617|Homo sapiens multiple ankyrin repeat... 29 9.6
AF521882-1|AAO14943.1| 2542|Homo sapiens multiple ankyrin repeat... 29 9.6
AB022659-1|BAA83380.1| 1460|Homo sapiens KARP-1-binding protein ... 29 9.6
AB022658-1|BAA83379.1| 1486|Homo sapiens KARP-1-binding protein ... 29 9.6
AB022657-1|BAA83378.1| 1584|Homo sapiens KARP-1-binding protein ... 29 9.6
AB007939-1|BAA32315.2| 1472|Homo sapiens KIAA0470 protein protein. 29 9.6
>U12202-2|AAB08007.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 217 bits (530), Expect = 1e-56
Identities = 101/122 (82%), Positives = 110/122 (90%)
Frame = -3
Query: 368 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 189
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 188 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKS 9
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT K+
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 8 KV 3
V
Sbjct: 124 NV 125
>U12202-1|AAB08006.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 217 bits (530), Expect = 1e-56
Identities = 101/122 (82%), Positives = 110/122 (90%)
Frame = -3
Query: 368 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 189
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 188 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKS 9
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT K+
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 8 KV 3
V
Sbjct: 124 NV 125
>M31520-2|AAA36588.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 217 bits (530), Expect = 1e-56
Identities = 101/122 (82%), Positives = 110/122 (90%)
Frame = -3
Query: 368 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 189
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 188 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKS 9
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT K+
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 8 KV 3
V
Sbjct: 124 NV 125
>BC071926-1|AAH71926.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 217 bits (530), Expect = 1e-56
Identities = 101/122 (82%), Positives = 110/122 (90%)
Frame = -3
Query: 368 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 189
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 188 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKS 9
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT K+
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 8 KV 3
V
Sbjct: 124 NV 125
>BC000523-1|AAH00523.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 217 bits (530), Expect = 1e-56
Identities = 101/122 (82%), Positives = 110/122 (90%)
Frame = -3
Query: 368 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 189
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 188 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKS 9
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT K+
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 8 KV 3
V
Sbjct: 124 NV 125
>AL512628-3|CAI16468.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 217 bits (530), Expect = 1e-56
Identities = 101/122 (82%), Positives = 110/122 (90%)
Frame = -3
Query: 368 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 189
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 188 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKS 9
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT K+
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 8 KV 3
V
Sbjct: 124 NV 125
>AL512628-2|CAI16467.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 217 bits (530), Expect = 1e-56
Identities = 101/122 (82%), Positives = 110/122 (90%)
Frame = -3
Query: 368 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 189
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 188 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKS 9
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT K+
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 8 KV 3
V
Sbjct: 124 NV 125
>BX537975-1|CAD97939.1| 132|Homo sapiens hypothetical protein
protein.
Length = 132
Score = 215 bits (526), Expect = 4e-56
Identities = 100/122 (81%), Positives = 110/122 (90%)
Frame = -3
Query: 368 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 189
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 188 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKS 9
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +R+QRKERKNRMKKVRGT K+
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSREQRKERKNRMKKVRGTAKA 123
Query: 8 KV 3
V
Sbjct: 124 NV 125
>BC004173-1|AAH04173.1| 1500|Homo sapiens ANKRD17 protein protein.
Length = 1500
Score = 34.7 bits (76), Expect = 0.15
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = -3
Query: 161 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 30
+++ + LDL K E RLA EKK+ +K++K++K + KK
Sbjct: 1457 SILLEELDLEKLREESRRLALAAKREKKKKKKKKKKKKKKKKKK 1500
>BC048271-1|AAH48271.1| 611|Homo sapiens ZC3H11A protein protein.
Length = 611
Score = 33.5 bits (73), Expect = 0.34
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = -3
Query: 179 GKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 6
G++TG + + + KH + G +KK+ +K++K++K + KK + KK K
Sbjct: 544 GETTGVDITKIQVKRCETMREKHMQKQPGNGKKKKKKKKKKKKKKKKKKKKKKKKKKK 601
>AF271256-1|AAK58397.1| 42|Homo sapiens HBV preS1(21-47) binding
protein protein.
Length = 42
Score = 31.9 bits (69), Expect = 1.0
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -3
Query: 86 EKKRPTRKQRKERKNRMKKVRGTKKSK 6
E+K+ +K++KERK R KK + KK K
Sbjct: 6 ERKKERKKEKKERKKRKKKEKERKKEK 32
>Z98886-1|CAI22750.1| 411|Homo sapiens adherens junction associated
protein 1 protein.
Length = 411
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -2
Query: 141 RSGQEVRTQAQVSSPRPVREEEAHAQ 64
RSGQ R A V SPRP R E H Q
Sbjct: 67 RSGQPARVPAPVWSPRPPRVERIHGQ 92
>AY282806-1|AAP35025.1| 411|Homo sapiens transmembrane protein
SHREW1 protein.
Length = 411
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -2
Query: 141 RSGQEVRTQAQVSSPRPVREEEAHAQ 64
RSGQ R A V SPRP R E H Q
Sbjct: 67 RSGQPARVPAPVWSPRPPRVERIHGQ 92
>AL391808-1|CAH72438.1| 411|Homo sapiens adherens junction
associated protein 1 protein.
Length = 411
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -2
Query: 141 RSGQEVRTQAQVSSPRPVREEEAHAQ 64
RSGQ R A V SPRP R E H Q
Sbjct: 67 RSGQPARVPAPVWSPRPPRVERIHGQ 92
>AL023586-1|CAI20566.1| 411|Homo sapiens adherens junction
associated protein 1 protein.
Length = 411
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -2
Query: 141 RSGQEVRTQAQVSSPRPVREEEAHAQ 64
RSGQ R A V SPRP R E H Q
Sbjct: 67 RSGQPARVPAPVWSPRPPRVERIHGQ 92
>AK127997-1|BAC87222.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ46115 fis, clone TESTI2037085. ).
Length = 148
Score = 31.5 bits (68), Expect = 1.4
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -3
Query: 131 KKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 6
KK + K + + +KK+ +K++K++KN+ KK + KK K
Sbjct: 37 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKK 78
>AF175409-1|AAD53278.1| 411|Homo sapiens unknown protein.
Length = 411
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -2
Query: 141 RSGQEVRTQAQVSSPRPVREEEAHAQ 64
RSGQ R A V SPRP R E H Q
Sbjct: 67 RSGQPARVPAPVWSPRPPRVERIHGQ 92
>U91930-1|AAD03777.1| 1112|Homo sapiens AP-3 complex delta subunit
protein.
Length = 1112
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 86 EKKRPTRKQRKERKNRMKKVRGTKKSK 6
+KK P K++K RK + ++ +G KKSK
Sbjct: 825 DKKSPKPKKKKHRKEKEERTKGKKKSK 851
>AC005545-2|AAC34214.1| 1079|Homo sapiens AP-3 complex delta
subunit, partial CDS protein.
Length = 1079
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 86 EKKRPTRKQRKERKNRMKKVRGTKKSK 6
+KK P K++K RK + ++ +G KKSK
Sbjct: 792 DKKSPKPKKKKHRKEKEERTKGKKKSK 818
>AB208804-1|BAD92041.1| 1284|Homo sapiens Adapter-related protein
complex 3 delta 1 subunit variant protein.
Length = 1284
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 86 EKKRPTRKQRKERKNRMKKVRGTKKSK 6
+KK P K++K RK + ++ +G KKSK
Sbjct: 997 DKKSPKPKKKKHRKEKEERTKGKKKSK 1023
>AK000295-1|BAA91063.1| 686|Homo sapiens protein ( Homo sapiens
cDNA FLJ20288 fis, clone HEP04414. ).
Length = 686
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 161 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 30
+++ LDL K E + A EK++ RK++K++K + KK
Sbjct: 640 SILLKELDLEKSREESRKQALAAKREKRKEKRKKKKKKKKKKKK 683
>BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 30.3 bits (65), Expect = 3.1
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 157 KANPVDLPPPKFVLKPNTNTTSGVTLYIL-ASFSRISVLLTVGFPGCKTSQTICLRANNL 333
K + L K PNT T + L L SF+++S L F G + QT+ LR+N+L
Sbjct: 110 KLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSL 169
Query: 334 LVMNLRV 354
+ +R+
Sbjct: 170 RTIPVRL 176
>BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 30.3 bits (65), Expect = 3.1
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 157 KANPVDLPPPKFVLKPNTNTTSGVTLYIL-ASFSRISVLLTVGFPGCKTSQTICLRANNL 333
K + L K PNT T + L L SF+++S L F G + QT+ LR+N+L
Sbjct: 110 KLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSL 169
Query: 334 LVMNLRV 354
+ +R+
Sbjct: 170 RTIPVRL 176
>AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat
transmembrane neuronal 2 protein protein.
Length = 516
Score = 30.3 bits (65), Expect = 3.1
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 157 KANPVDLPPPKFVLKPNTNTTSGVTLYIL-ASFSRISVLLTVGFPGCKTSQTICLRANNL 333
K + L K PNT T + L L SF+++S L F G + QT+ LR+N+L
Sbjct: 110 KLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSL 169
Query: 334 LVMNLRV 354
+ +R+
Sbjct: 170 RTIPVRL 176
>AB014597-1|BAA31672.2| 2486|Homo sapiens KIAA0697 protein protein.
Length = 2486
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 161 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 39
+++ + LDL K E RLA EK++ R+++KE + R
Sbjct: 1340 SILLEELDLEKLREESRRLALAAKREKRKEKRRKKKEEQRR 1380
>AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein.
Length = 529
Score = 30.3 bits (65), Expect = 3.1
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 157 KANPVDLPPPKFVLKPNTNTTSGVTLYIL-ASFSRISVLLTVGFPGCKTSQTICLRANNL 333
K + L K PNT T + L L SF+++S L F G + QT+ LR+N+L
Sbjct: 123 KLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSL 182
Query: 334 LVMNLRV 354
+ +R+
Sbjct: 183 RTIPVRL 189
>AB231746-1|BAE17134.1| 567|Homo sapiens hypothetical protein
protein.
Length = 567
Score = 29.9 bits (64), Expect = 4.1
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = +3
Query: 33 LHSVLTFFTLFARGPLLLVQAVAS*PVLGFELLGQIECVVDQSESS*LATSEVCLETEYE 212
+HS+ T AR + AV+ + +G+IE ++ + S A +E CL+ E E
Sbjct: 103 VHSMSVRLTCHARSMVSEYSAVSR---NSLKEMGEIEKLLMEKCSELSAVTERCLQVENE 159
Query: 213 HYIGSNLVHFGELLTDLG 266
H + S E L+ LG
Sbjct: 160 HVLKSTKACVSETLSMLG 177
>Z84487-2|CAI42674.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 134 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 3
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1331 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1374
>Z84487-1|CAI42675.1| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 134 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 3
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1293 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1336
>U97103-1|AAC51657.1| 2375|Homo sapiens X-linked nuclear protein
protein.
Length = 2375
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 134 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 3
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1214 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1257
>U75653-1|AAC51655.1| 2492|Homo sapiens zinc finger helicase protein.
Length = 2492
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 134 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 3
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1331 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1374
>U72938-1|AAB49971.2| 2454|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2454
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 134 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 3
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1293 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1336
>U72937-1|AAB49970.2| 2492|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2492
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 134 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 3
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1331 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1374
>U72936-1|AAB49969.1| 2288|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2288
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 134 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 3
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1127 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1170
>U72935-3|AAB40700.1| 2288|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2288
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 134 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 3
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1127 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1170
>U72935-2|AAB40699.1| 2337|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2337
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 134 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 3
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1176 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1219
>U72935-1|AAB40698.1| 2375|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2375
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 134 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 3
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1214 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1257
>U09820-1|AAC50069.1| 1641|Homo sapiens helicase II protein.
Length = 1641
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 134 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 3
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 472 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 515
>EF467914-1|ABO43036.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked protein.
Length = 2492
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 134 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 3
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1331 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1374
>BC130280-1|AAI30281.1| 1621|Homo sapiens ABCA8 protein protein.
Length = 1621
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 1 PTLDFLVPRTFFILFLRSLRCL 66
P L FL+P FI+FL +LRCL
Sbjct: 1199 PFLVFLIPFLHFIIFLFTLRCL 1220
>AL121874-2|CAI40710.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 134 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 3
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1331 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1374
>AL121874-1|CAB90351.2| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 134 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 3
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1293 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1336
>AL109753-2|CAI43115.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 134 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 3
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1331 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1374
>AL109753-1|CAI43116.1| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 134 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 3
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1293 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1336
>AK025632-1|BAB15196.1| 720|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21979 fis, clone HEP06065. ).
Length = 720
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = -3
Query: 146 TLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 6
++D AKK + +KK+ +K++K++K + KK + KK K
Sbjct: 674 SMDKAKKSITNSDIVSISKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 720
>AB231747-1|BAE17135.1| 490|Homo sapiens hypothetical protein
protein.
Length = 490
Score = 29.5 bits (63), Expect = 5.5
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = +3
Query: 33 LHSVLTFFTLFARGPLLLVQAVAS*PVLGFELLGQIECVVDQSESS*LATSEVCLETEYE 212
+HS+ T AR + AV+ + +G+IE ++ + S A +E CL+ E E
Sbjct: 103 VHSMSVRLTCHARSMVSEYSAVSR---NSLKEMGEIEKLLMEKCSELSAVTERCLQVENE 159
Query: 213 HYIGSNLVHFGELLTDLG 266
H + S E L+ LG
Sbjct: 160 HVLKSMKACMSETLSMLG 177
>AB209545-1|BAD92782.1| 1224|Homo sapiens transcriptional regulator
ATRX isoform 1 variant protein.
Length = 1224
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 134 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 3
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 628 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 671
>AB208928-1|BAD92165.1| 1383|Homo sapiens transcriptional regulator
ATRX isoform 2 variant protein.
Length = 1383
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 134 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 3
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1296 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1339
>AB102641-1|BAC81110.1| 2492|Homo sapiens ATRX protein.
Length = 2492
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 134 AKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSKV 3
+KK +HRL RH L + +++K + K+V+G + KV
Sbjct: 1331 SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV 1374
>AB020629-1|BAA74845.2| 1591|Homo sapiens KIAA0822 protein protein.
Length = 1591
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 1 PTLDFLVPRTFFILFLRSLRCL 66
P L FL+P FI+FL +LRCL
Sbjct: 1169 PFLVFLIPFLHFIIFLFTLRCL 1190
>BC127700-1|AAI27701.1| 520|Homo sapiens INSC protein protein.
Length = 520
Score = 29.1 bits (62), Expect = 7.2
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = +3
Query: 33 LHSVLTFFTLFARGPLLLVQAVAS*PVLGFELLGQIECVVDQSESS*LATSEVCLETEYE 212
+HS+ T AR + AV+ + +G+IE ++ + S A +E CL+ E E
Sbjct: 103 VHSMSVRLTCHARSMVSEYSAVSR---NSLKEMGEIEKLLMEKCSELSAVTERCLQVENE 159
Query: 213 HYIGSNLVHFGELLTDLG 266
H + S E L+ LG
Sbjct: 160 HVLKSMKACVSETLSMLG 177
>AK025859-1|BAB15260.1| 460|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22206 fis, clone HRC01431. ).
Length = 460
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -3
Query: 161 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERK 45
+++ + LDL K E RLA EK++ R+++K++K
Sbjct: 421 SILLEELDLEKLREESRRLALAAKREKRKEKRRKKKKKK 459
>AB236159-1|BAE93464.1| 579|Homo sapiens Inscuteable long form
protein.
Length = 579
Score = 29.1 bits (62), Expect = 7.2
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = +3
Query: 33 LHSVLTFFTLFARGPLLLVQAVAS*PVLGFELLGQIECVVDQSESS*LATSEVCLETEYE 212
+HS+ T AR + AV+ + +G+IE ++ + S A +E CL+ E E
Sbjct: 150 VHSMSVRLTCHARSMVSEYSAVSR---NSLKEMGEIEKLLMEKCSELSAVTERCLQVENE 206
Query: 213 HYIGSNLVHFGELLTDLG 266
H + S E L+ LG
Sbjct: 207 HVLKSMKACVSETLSMLG 224
>AB236158-1|BAE93463.1| 532|Homo sapiens Inscuteable short form
protein.
Length = 532
Score = 29.1 bits (62), Expect = 7.2
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = +3
Query: 33 LHSVLTFFTLFARGPLLLVQAVAS*PVLGFELLGQIECVVDQSESS*LATSEVCLETEYE 212
+HS+ T AR + AV+ + +G+IE ++ + S A +E CL+ E E
Sbjct: 103 VHSMSVRLTCHARSMVSEYSAVSR---NSLKEMGEIEKLLMEKCSELSAVTERCLQVENE 159
Query: 213 HYIGSNLVHFGELLTDLG 266
H + S E L+ LG
Sbjct: 160 HVLKSMKACVSETLSMLG 177
>AB231745-1|BAE17133.1| 532|Homo sapiens hypothetical protein
protein.
Length = 532
Score = 29.1 bits (62), Expect = 7.2
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = +3
Query: 33 LHSVLTFFTLFARGPLLLVQAVAS*PVLGFELLGQIECVVDQSESS*LATSEVCLETEYE 212
+HS+ T AR + AV+ + +G+IE ++ + S A +E CL+ E E
Sbjct: 103 VHSMSVRLTCHARSMVSEYSAVSR---NSLKEMGEIEKLLMEKCSELSAVTERCLQVENE 159
Query: 213 HYIGSNLVHFGELLTDLG 266
H + S E L+ LG
Sbjct: 160 HVLKSMKACVSETLSMLG 177
>BC146790-1|AAI46791.1| 1460|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1460
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 186 RRWQVNWIRFDLRHTRSGQEVRTQAQVSSPRPVREE 79
+RW W HTR QE R + S+P P+ E
Sbjct: 483 KRWVSQWASLAANHTRHDQEERIM-EFSAPLPLENE 517
>AL606534-4|CAI12944.1| 1584|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1584
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 186 RRWQVNWIRFDLRHTRSGQEVRTQAQVSSPRPVREE 79
+RW W HTR QE R + S+P P+ E
Sbjct: 581 KRWVSQWASLAANHTRHDQEERIM-EFSAPLPLENE 615
>AL606534-3|CAI12943.1| 1486|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1486
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 186 RRWQVNWIRFDLRHTRSGQEVRTQAQVSSPRPVREE 79
+RW W HTR QE R + S+P P+ E
Sbjct: 483 KRWVSQWASLAANHTRHDQEERIM-EFSAPLPLENE 517
>AL606534-2|CAI12945.1| 1460|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1460
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 186 RRWQVNWIRFDLRHTRSGQEVRTQAQVSSPRPVREE 79
+RW W HTR QE R + S+P P+ E
Sbjct: 483 KRWVSQWASLAANHTRHDQEERIM-EFSAPLPLENE 517
>AL606534-1|CAI12942.1| 1557|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1557
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 186 RRWQVNWIRFDLRHTRSGQEVRTQAQVSSPRPVREE 79
+RW W HTR QE R + S+P P+ E
Sbjct: 544 KRWVSQWASLAANHTRHDQEERIM-EFSAPLPLENE 578
>AF521883-1|AAO14944.1| 2617|Homo sapiens multiple ankyrin repeats
single KH domain protein isoform 2 protein.
Length = 2617
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -3
Query: 161 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 6
+++ LDL K E + A EK++ RK++KE + R ++ K K
Sbjct: 1429 SILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPK 1480
>AF521882-1|AAO14943.1| 2542|Homo sapiens multiple ankyrin repeats
single KH domain protein isoform 1 protein.
Length = 2542
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -3
Query: 161 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGTKKSK 6
+++ LDL K E + A EK++ RK++KE + R ++ K K
Sbjct: 1429 SILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPK 1480
>AB022659-1|BAA83380.1| 1460|Homo sapiens KARP-1-binding protein 3
protein.
Length = 1460
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 186 RRWQVNWIRFDLRHTRSGQEVRTQAQVSSPRPVREE 79
+RW W HTR QE R + S+P P+ E
Sbjct: 483 KRWVSQWASLAANHTRHDQEERIM-EFSAPLPLENE 517
>AB022658-1|BAA83379.1| 1486|Homo sapiens KARP-1-binding protein 2
(KAB2) protein.
Length = 1486
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 186 RRWQVNWIRFDLRHTRSGQEVRTQAQVSSPRPVREE 79
+RW W HTR QE R + S+P P+ E
Sbjct: 483 KRWVSQWASLAANHTRHDQEERIM-EFSAPLPLENE 517
>AB022657-1|BAA83378.1| 1584|Homo sapiens KARP-1-binding protein 1
(KAB1) protein.
Length = 1584
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 186 RRWQVNWIRFDLRHTRSGQEVRTQAQVSSPRPVREE 79
+RW W HTR QE R + S+P P+ E
Sbjct: 581 KRWVSQWASLAANHTRHDQEERIM-EFSAPLPLENE 615
>AB007939-1|BAA32315.2| 1472|Homo sapiens KIAA0470 protein protein.
Length = 1472
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 186 RRWQVNWIRFDLRHTRSGQEVRTQAQVSSPRPVREE 79
+RW W HTR QE R + S+P P+ E
Sbjct: 495 KRWVSQWASLAANHTRHDQEERIM-EFSAPLPLENE 529
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,780,384
Number of Sequences: 237096
Number of extensions: 1467958
Number of successful extensions: 4521
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 4214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4506
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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