Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc13c18
         (690 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.9  
EF426194-1|ABO26437.1|  133|Anopheles gambiae unknown protein.         24   5.2  
EF426192-1|ABO26435.1|  133|Anopheles gambiae unknown protein.         24   5.2  
EF426191-1|ABO26434.1|  133|Anopheles gambiae unknown protein.         24   5.2  
EF426190-1|ABO26433.1|  133|Anopheles gambiae unknown protein.         24   5.2  
EF426189-1|ABO26432.1|  133|Anopheles gambiae unknown protein.         24   5.2  
EF426188-1|ABO26431.1|  133|Anopheles gambiae unknown protein.         24   5.2  
EF426187-1|ABO26430.1|  133|Anopheles gambiae unknown protein.         24   5.2  
EF426186-1|ABO26429.1|  133|Anopheles gambiae unknown protein.         24   5.2  
EF426185-1|ABO26428.1|  133|Anopheles gambiae unknown protein.         24   5.2  
EF426184-1|ABO26427.1|  133|Anopheles gambiae unknown protein.         24   5.2  
EF426183-1|ABO26426.1|  133|Anopheles gambiae unknown protein.         24   5.2  
EF426182-1|ABO26425.1|  133|Anopheles gambiae unknown protein.         24   5.2  
EF426181-1|ABO26424.1|  133|Anopheles gambiae unknown protein.         24   5.2  
EF426180-1|ABO26423.1|  133|Anopheles gambiae unknown protein.         24   5.2  
EF426179-1|ABO26422.1|  133|Anopheles gambiae unknown protein.         24   5.2  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   9.1  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 71   NRFGKFVINKLYXNKINVHLAVLSNFILTYVTSMR 175
            NR  KFVINK+  +KI     VL    L ++T ++
Sbjct: 2882 NRLDKFVINKM--DKIKDMKMVLKEKNLKFITQIK 2914


>EF426194-1|ABO26437.1|  133|Anopheles gambiae unknown protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 584 LDFSHVSLPLYLSALSQS 637
           +D SHVS+P  L AL+ S
Sbjct: 106 VDLSHVSVPTMLDALATS 123


>EF426192-1|ABO26435.1|  133|Anopheles gambiae unknown protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 584 LDFSHVSLPLYLSALSQS 637
           +D SHVS+P  L AL+ S
Sbjct: 106 VDLSHVSVPTMLDALATS 123


>EF426191-1|ABO26434.1|  133|Anopheles gambiae unknown protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 584 LDFSHVSLPLYLSALSQS 637
           +D SHVS+P  L AL+ S
Sbjct: 106 VDLSHVSVPTMLDALATS 123


>EF426190-1|ABO26433.1|  133|Anopheles gambiae unknown protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 584 LDFSHVSLPLYLSALSQS 637
           +D SHVS+P  L AL+ S
Sbjct: 106 VDLSHVSVPTMLDALATS 123


>EF426189-1|ABO26432.1|  133|Anopheles gambiae unknown protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 584 LDFSHVSLPLYLSALSQS 637
           +D SHVS+P  L AL+ S
Sbjct: 106 VDLSHVSVPTMLDALATS 123


>EF426188-1|ABO26431.1|  133|Anopheles gambiae unknown protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 584 LDFSHVSLPLYLSALSQS 637
           +D SHVS+P  L AL+ S
Sbjct: 106 VDLSHVSVPTMLDALATS 123


>EF426187-1|ABO26430.1|  133|Anopheles gambiae unknown protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 584 LDFSHVSLPLYLSALSQS 637
           +D SHVS+P  L AL+ S
Sbjct: 106 VDLSHVSVPTMLDALATS 123


>EF426186-1|ABO26429.1|  133|Anopheles gambiae unknown protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 584 LDFSHVSLPLYLSALSQS 637
           +D SHVS+P  L AL+ S
Sbjct: 106 VDLSHVSVPTMLDALATS 123


>EF426185-1|ABO26428.1|  133|Anopheles gambiae unknown protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 584 LDFSHVSLPLYLSALSQS 637
           +D SHVS+P  L AL+ S
Sbjct: 106 VDLSHVSVPTMLDALATS 123


>EF426184-1|ABO26427.1|  133|Anopheles gambiae unknown protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 584 LDFSHVSLPLYLSALSQS 637
           +D SHVS+P  L AL+ S
Sbjct: 106 VDLSHVSVPTMLDALATS 123


>EF426183-1|ABO26426.1|  133|Anopheles gambiae unknown protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 584 LDFSHVSLPLYLSALSQS 637
           +D SHVS+P  L AL+ S
Sbjct: 106 VDLSHVSVPTMLDALATS 123


>EF426182-1|ABO26425.1|  133|Anopheles gambiae unknown protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 584 LDFSHVSLPLYLSALSQS 637
           +D SHVS+P  L AL+ S
Sbjct: 106 VDLSHVSVPTMLDALATS 123


>EF426181-1|ABO26424.1|  133|Anopheles gambiae unknown protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 584 LDFSHVSLPLYLSALSQS 637
           +D SHVS+P  L AL+ S
Sbjct: 106 VDLSHVSVPTMLDALATS 123


>EF426180-1|ABO26423.1|  133|Anopheles gambiae unknown protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 584 LDFSHVSLPLYLSALSQS 637
           +D SHVS+P  L AL+ S
Sbjct: 106 VDLSHVSVPTMLDALATS 123


>EF426179-1|ABO26422.1|  133|Anopheles gambiae unknown protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 584 LDFSHVSLPLYLSALSQS 637
           +D SHVS+P  L AL+ S
Sbjct: 106 VDLSHVSVPTMLDALATS 123


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 215 KNDVLLLRIYNFKNMLNHQ 271
           KND +L+ IYN + M   Q
Sbjct: 62  KNDSILITIYNHRKMPKRQ 80


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,535
Number of Sequences: 2352
Number of extensions: 11458
Number of successful extensions: 24
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)