Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13c07
(808 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT014638-1|AAT27262.1| 433|Drosophila melanogaster RH44447p pro... 32 0.80
AY070492-1|AAL47963.1| 121|Drosophila melanogaster GH01562p pro... 32 0.80
AE014297-1396|AAS65140.1| 121|Drosophila melanogaster CG6959-PB... 32 0.80
AE014297-1395|AAF54710.1| 425|Drosophila melanogaster CG6959-PA... 32 0.80
AE014296-2483|AAN11792.1| 175|Drosophila melanogaster CG6988-PB... 30 4.3
AY071529-1|AAL49151.1| 508|Drosophila melanogaster RE57384p pro... 29 9.9
AF441757-1|AAM20921.1| 508|Drosophila melanogaster metallo endo... 29 9.9
AF145608-1|AAD38583.1| 674|Drosophila melanogaster BcDNA.GH0275... 29 9.9
AE014298-2816|AAF48933.1| 1513|Drosophila melanogaster CG12359-P... 29 9.9
AE013599-1348|AAF58617.2| 508|Drosophila melanogaster CG8988-PA... 29 9.9
>BT014638-1|AAT27262.1| 433|Drosophila melanogaster RH44447p
protein.
Length = 433
Score = 32.3 bits (70), Expect = 0.80
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +3
Query: 597 GHFGAEPDFVLPAPAGNCADAL-GGTLLYSLGQDLPH-GVHRGXXXXXXXXXDGYNASFL 770
GH AEP +L G CADA+ + + +D PH G G+ A+ +
Sbjct: 319 GHVDAEPAHLLQMDMGQCADAIAAAATILNTAEDEPHYGDPEASHLQPQAHISGHTATLI 378
Query: 771 TLISLCTPLV 800
L+ + T ++
Sbjct: 379 FLLIVLTMIL 388
>AY070492-1|AAL47963.1| 121|Drosophila melanogaster GH01562p
protein.
Length = 121
Score = 32.3 bits (70), Expect = 0.80
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +3
Query: 597 GHFGAEPDFVLPAPAGNCADAL-GGTLLYSLGQDLPH-GVHRGXXXXXXXXXDGYNASFL 770
GH AEP +L G CADA+ + + +D PH G G+ A+ +
Sbjct: 7 GHVDAEPAHLLQMDMGQCADAIAAAATILNTAEDEPHYGDPEASHLQPQAHISGHTATLI 66
Query: 771 TLISLCTPLV 800
L+ + T ++
Sbjct: 67 FLLIVLTMIL 76
>AE014297-1396|AAS65140.1| 121|Drosophila melanogaster CG6959-PB,
isoform B protein.
Length = 121
Score = 32.3 bits (70), Expect = 0.80
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +3
Query: 597 GHFGAEPDFVLPAPAGNCADAL-GGTLLYSLGQDLPH-GVHRGXXXXXXXXXDGYNASFL 770
GH AEP +L G CADA+ + + +D PH G G+ A+ +
Sbjct: 7 GHVDAEPAHLLQMDMGQCADAIAAAATILNTAEDEPHYGDPEASHLQPQAHISGHTATLI 66
Query: 771 TLISLCTPLV 800
L+ + T ++
Sbjct: 67 FLLIVLTMIL 76
>AE014297-1395|AAF54710.1| 425|Drosophila melanogaster CG6959-PA,
isoform A protein.
Length = 425
Score = 32.3 bits (70), Expect = 0.80
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +3
Query: 597 GHFGAEPDFVLPAPAGNCADAL-GGTLLYSLGQDLPH-GVHRGXXXXXXXXXDGYNASFL 770
GH AEP +L G CADA+ + + +D PH G G+ A+ +
Sbjct: 311 GHVDAEPAHLLQMDMGQCADAIAAAATILNTAEDEPHYGDPEASHLQPQAHISGHTATLI 370
Query: 771 TLISLCTPLV 800
L+ + T ++
Sbjct: 371 FLLIVLTMIL 380
>AE014296-2483|AAN11792.1| 175|Drosophila melanogaster CG6988-PB,
isoform B protein.
Length = 175
Score = 29.9 bits (64), Expect = 4.3
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = -1
Query: 748 SQRSFFRRNFPRWTPWGRSWPNE*RRVPPSASAQFPAGAGRTKSGSAPKWPGWRCLS 578
S R+ + PRWTP SW R + S Q A RT S W G +S
Sbjct: 72 STRTMRILSLPRWTPLPTSW----RALRSRPSPQSNTSARRTTRSSTSTWTGLSMIS 124
>AY071529-1|AAL49151.1| 508|Drosophila melanogaster RE57384p
protein.
Length = 508
Score = 28.7 bits (61), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 488 AWLSLVVVSIVVPTGLLLLGLAPCCWFD 571
AWL L+ ++V GL L+ PC FD
Sbjct: 426 AWLLLLKYNVVFSIGLALINAIPCFGFD 453
>AF441757-1|AAM20921.1| 508|Drosophila melanogaster metallo
endopeptidase protein.
Length = 508
Score = 28.7 bits (61), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 488 AWLSLVVVSIVVPTGLLLLGLAPCCWFD 571
AWL L+ ++V GL L+ PC FD
Sbjct: 426 AWLLLLKYNVVFSIGLALINAIPCFGFD 453
>AF145608-1|AAD38583.1| 674|Drosophila melanogaster BcDNA.GH02751
protein.
Length = 674
Score = 28.7 bits (61), Expect = 9.9
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +2
Query: 266 IFDPMIPMQFQIRDPAPYVPIQIKNSQRSQCDTTSKTNTHQLYRQDKLR 412
IF+P + Q ++R+ AP+VP + + SQ + ++ + D +R
Sbjct: 107 IFNPPVYTQHRVRNDAPHVPTPFDDEESSQRLANAGPSSRPMTYSDAVR 155
>AE014298-2816|AAF48933.1| 1513|Drosophila melanogaster CG12359-PA
protein.
Length = 1513
Score = 28.7 bits (61), Expect = 9.9
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +2
Query: 266 IFDPMIPMQFQIRDPAPYVPIQIKNSQRSQCDTTSKTNTHQLYRQDKLR 412
IF+P + Q ++R+ AP+VP + + SQ + ++ + D +R
Sbjct: 946 IFNPPVYTQHRVRNDAPHVPTPFDDEESSQRLANAGPSSRPMTYSDAVR 994
>AE013599-1348|AAF58617.2| 508|Drosophila melanogaster CG8988-PA
protein.
Length = 508
Score = 28.7 bits (61), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 488 AWLSLVVVSIVVPTGLLLLGLAPCCWFD 571
AWL L+ ++V GL L+ PC FD
Sbjct: 426 AWLLLLKYNVVFSIGLALINAIPCFGFD 453
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,886,986
Number of Sequences: 53049
Number of extensions: 755907
Number of successful extensions: 1866
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1866
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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