Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13c06
(788 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061183-1|AAL28731.1| 790|Drosophila melanogaster LD14901p pro... 45 1e-04
AE014296-553|AAN11527.1| 790|Drosophila melanogaster CG11486-PG... 45 1e-04
AE014296-554|AAN11528.1| 773|Drosophila melanogaster CG11486-PE... 43 4e-04
AE014296-552|AAF47713.3| 780|Drosophila melanogaster CG11486-PC... 43 4e-04
AE014296-550|AAN11525.1| 788|Drosophila melanogaster CG11486-PN... 43 4e-04
AE014296-549|AAN11524.1| 788|Drosophila melanogaster CG11486-PM... 43 4e-04
AE014296-548|AAN11523.1| 788|Drosophila melanogaster CG11486-PK... 43 4e-04
AE014296-547|AAN11522.1| 788|Drosophila melanogaster CG11486-PJ... 43 4e-04
AE014296-546|AAS64953.1| 788|Drosophila melanogaster CG11486-PH... 43 4e-04
AE014296-545|AAS64952.1| 788|Drosophila melanogaster CG11486-PF... 43 4e-04
AE014296-557|AAG22236.1| 742|Drosophila melanogaster CG11486-PD... 35 0.11
AE014296-556|AAG22235.1| 742|Drosophila melanogaster CG11486-PB... 35 0.11
AE014296-555|AAG22234.1| 742|Drosophila melanogaster CG11486-PA... 35 0.11
AE014296-551|AAN11526.1| 757|Drosophila melanogaster CG11486-PL... 35 0.11
>AY061183-1|AAL28731.1| 790|Drosophila melanogaster LD14901p
protein.
Length = 790
Score = 45.2 bits (102), Expect = 1e-04
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Frame = -2
Query: 532 SFEIMDPSIFLP--YAPPNGLPQESKLVTYMSR-STSTPT-RSLNHAIGKLTLDSSPPGV 365
SFE D + P ++P NG+P ESKL TYM+R + +TP+ LN+ L LDS P
Sbjct: 9 SFEFSDTAAMDPIFFSPTNGIPSESKLATYMNRQNVATPSGYGLNNGFSLLNLDS--PLN 66
Query: 364 KKVLVS----EFIP 335
KK V+ EFIP
Sbjct: 67 KKSQVTPQSPEFIP 80
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2
Query: 247 STVHQENVGGTTYFYSTNSDSLNTTSGLNS 158
++VHQENVGGT YFY T +++ N+ +NS
Sbjct: 265 TSVHQENVGGTIYFYPT-ANAQNSQPVVNS 293
>AE014296-553|AAN11527.1| 790|Drosophila melanogaster CG11486-PG,
isoform G protein.
Length = 790
Score = 45.2 bits (102), Expect = 1e-04
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Frame = -2
Query: 532 SFEIMDPSIFLP--YAPPNGLPQESKLVTYMSR-STSTPT-RSLNHAIGKLTLDSSPPGV 365
SFE D + P ++P NG+P ESKL TYM+R + +TP+ LN+ L LDS P
Sbjct: 9 SFEFSDTAAMDPIFFSPTNGIPSESKLATYMNRQNVATPSGYGLNNGFSLLNLDS--PLN 66
Query: 364 KKVLVS----EFIP 335
KK V+ EFIP
Sbjct: 67 KKSQVTPQSPEFIP 80
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2
Query: 247 STVHQENVGGTTYFYSTNSDSLNTTSGLNS 158
++VHQENVGGT YFY T +++ N+ +NS
Sbjct: 265 TSVHQENVGGTIYFYPT-ANAQNSQPVVNS 293
>AE014296-554|AAN11528.1| 773|Drosophila melanogaster CG11486-PE,
isoform E protein.
Length = 773
Score = 43.2 bits (97), Expect = 4e-04
Identities = 32/68 (47%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Frame = -2
Query: 520 MDPSIFLPYAPPNGLPQESKLVTYMSR-STSTPT-RSLNHAIGKLTLDSSPPGVKKVLVS 347
MDP F +P NG+P ESKL TYM+R + +TP+ LN+ L LDS P KK V+
Sbjct: 1 MDPIFF---SPTNGIPSESKLATYMNRQNVATPSGYGLNNGFSLLNLDS--PLNKKSQVT 55
Query: 346 ----EFIP 335
EFIP
Sbjct: 56 PQSPEFIP 63
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2
Query: 247 STVHQENVGGTTYFYSTNSDSLNTTSGLNS 158
++VHQENVGGT YFY T +++ N+ +NS
Sbjct: 248 TSVHQENVGGTIYFYPT-ANAQNSQPVVNS 276
>AE014296-552|AAF47713.3| 780|Drosophila melanogaster CG11486-PC,
isoform C protein.
Length = 780
Score = 43.2 bits (97), Expect = 4e-04
Identities = 32/68 (47%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Frame = -2
Query: 520 MDPSIFLPYAPPNGLPQESKLVTYMSR-STSTPT-RSLNHAIGKLTLDSSPPGVKKVLVS 347
MDP F +P NG+P ESKL TYM+R + +TP+ LN+ L LDS P KK V+
Sbjct: 8 MDPIFF---SPTNGIPSESKLATYMNRQNVATPSGYGLNNGFSLLNLDS--PLNKKSQVT 62
Query: 346 ----EFIP 335
EFIP
Sbjct: 63 PQSPEFIP 70
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2
Query: 247 STVHQENVGGTTYFYSTNSDSLNTTSGLNS 158
++VHQENVGGT YFY T +++ N+ +NS
Sbjct: 255 TSVHQENVGGTIYFYPT-ANAQNSQPVVNS 283
>AE014296-550|AAN11525.1| 788|Drosophila melanogaster CG11486-PN,
isoform N protein.
Length = 788
Score = 43.2 bits (97), Expect = 4e-04
Identities = 32/68 (47%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Frame = -2
Query: 520 MDPSIFLPYAPPNGLPQESKLVTYMSR-STSTPT-RSLNHAIGKLTLDSSPPGVKKVLVS 347
MDP F +P NG+P ESKL TYM+R + +TP+ LN+ L LDS P KK V+
Sbjct: 16 MDPIFF---SPTNGIPSESKLATYMNRQNVATPSGYGLNNGFSLLNLDS--PLNKKSQVT 70
Query: 346 ----EFIP 335
EFIP
Sbjct: 71 PQSPEFIP 78
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2
Query: 247 STVHQENVGGTTYFYSTNSDSLNTTSGLNS 158
++VHQENVGGT YFY T +++ N+ +NS
Sbjct: 263 TSVHQENVGGTIYFYPT-ANAQNSQPVVNS 291
>AE014296-549|AAN11524.1| 788|Drosophila melanogaster CG11486-PM,
isoform M protein.
Length = 788
Score = 43.2 bits (97), Expect = 4e-04
Identities = 32/68 (47%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Frame = -2
Query: 520 MDPSIFLPYAPPNGLPQESKLVTYMSR-STSTPT-RSLNHAIGKLTLDSSPPGVKKVLVS 347
MDP F +P NG+P ESKL TYM+R + +TP+ LN+ L LDS P KK V+
Sbjct: 16 MDPIFF---SPTNGIPSESKLATYMNRQNVATPSGYGLNNGFSLLNLDS--PLNKKSQVT 70
Query: 346 ----EFIP 335
EFIP
Sbjct: 71 PQSPEFIP 78
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2
Query: 247 STVHQENVGGTTYFYSTNSDSLNTTSGLNS 158
++VHQENVGGT YFY T +++ N+ +NS
Sbjct: 263 TSVHQENVGGTIYFYPT-ANAQNSQPVVNS 291
>AE014296-548|AAN11523.1| 788|Drosophila melanogaster CG11486-PK,
isoform K protein.
Length = 788
Score = 43.2 bits (97), Expect = 4e-04
Identities = 32/68 (47%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Frame = -2
Query: 520 MDPSIFLPYAPPNGLPQESKLVTYMSR-STSTPT-RSLNHAIGKLTLDSSPPGVKKVLVS 347
MDP F +P NG+P ESKL TYM+R + +TP+ LN+ L LDS P KK V+
Sbjct: 16 MDPIFF---SPTNGIPSESKLATYMNRQNVATPSGYGLNNGFSLLNLDS--PLNKKSQVT 70
Query: 346 ----EFIP 335
EFIP
Sbjct: 71 PQSPEFIP 78
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2
Query: 247 STVHQENVGGTTYFYSTNSDSLNTTSGLNS 158
++VHQENVGGT YFY T +++ N+ +NS
Sbjct: 263 TSVHQENVGGTIYFYPT-ANAQNSQPVVNS 291
>AE014296-547|AAN11522.1| 788|Drosophila melanogaster CG11486-PJ,
isoform J protein.
Length = 788
Score = 43.2 bits (97), Expect = 4e-04
Identities = 32/68 (47%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Frame = -2
Query: 520 MDPSIFLPYAPPNGLPQESKLVTYMSR-STSTPT-RSLNHAIGKLTLDSSPPGVKKVLVS 347
MDP F +P NG+P ESKL TYM+R + +TP+ LN+ L LDS P KK V+
Sbjct: 16 MDPIFF---SPTNGIPSESKLATYMNRQNVATPSGYGLNNGFSLLNLDS--PLNKKSQVT 70
Query: 346 ----EFIP 335
EFIP
Sbjct: 71 PQSPEFIP 78
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2
Query: 247 STVHQENVGGTTYFYSTNSDSLNTTSGLNS 158
++VHQENVGGT YFY T +++ N+ +NS
Sbjct: 263 TSVHQENVGGTIYFYPT-ANAQNSQPVVNS 291
>AE014296-546|AAS64953.1| 788|Drosophila melanogaster CG11486-PH,
isoform H protein.
Length = 788
Score = 43.2 bits (97), Expect = 4e-04
Identities = 32/68 (47%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Frame = -2
Query: 520 MDPSIFLPYAPPNGLPQESKLVTYMSR-STSTPT-RSLNHAIGKLTLDSSPPGVKKVLVS 347
MDP F +P NG+P ESKL TYM+R + +TP+ LN+ L LDS P KK V+
Sbjct: 16 MDPIFF---SPTNGIPSESKLATYMNRQNVATPSGYGLNNGFSLLNLDS--PLNKKSQVT 70
Query: 346 ----EFIP 335
EFIP
Sbjct: 71 PQSPEFIP 78
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2
Query: 247 STVHQENVGGTTYFYSTNSDSLNTTSGLNS 158
++VHQENVGGT YFY T +++ N+ +NS
Sbjct: 263 TSVHQENVGGTIYFYPT-ANAQNSQPVVNS 291
>AE014296-545|AAS64952.1| 788|Drosophila melanogaster CG11486-PF,
isoform F protein.
Length = 788
Score = 43.2 bits (97), Expect = 4e-04
Identities = 32/68 (47%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Frame = -2
Query: 520 MDPSIFLPYAPPNGLPQESKLVTYMSR-STSTPT-RSLNHAIGKLTLDSSPPGVKKVLVS 347
MDP F +P NG+P ESKL TYM+R + +TP+ LN+ L LDS P KK V+
Sbjct: 16 MDPIFF---SPTNGIPSESKLATYMNRQNVATPSGYGLNNGFSLLNLDS--PLNKKSQVT 70
Query: 346 ----EFIP 335
EFIP
Sbjct: 71 PQSPEFIP 78
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2
Query: 247 STVHQENVGGTTYFYSTNSDSLNTTSGLNS 158
++VHQENVGGT YFY T +++ N+ +NS
Sbjct: 263 TSVHQENVGGTIYFYPT-ANAQNSQPVVNS 291
>AE014296-557|AAG22236.1| 742|Drosophila melanogaster CG11486-PD,
isoform D protein.
Length = 742
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2
Query: 247 STVHQENVGGTTYFYSTNSDSLNTTSGLNS 158
++VHQENVGGT YFY T +++ N+ +NS
Sbjct: 217 TSVHQENVGGTIYFYPT-ANAQNSQPVVNS 245
Score = 32.3 bits (70), Expect = 0.78
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2
Query: 520 MDPSIFLPYAPPNGLPQESKLVTYM 446
MDP F +P NG+P ESKL TYM
Sbjct: 1 MDPIFF---SPTNGIPSESKLATYM 22
>AE014296-556|AAG22235.1| 742|Drosophila melanogaster CG11486-PB,
isoform B protein.
Length = 742
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2
Query: 247 STVHQENVGGTTYFYSTNSDSLNTTSGLNS 158
++VHQENVGGT YFY T +++ N+ +NS
Sbjct: 217 TSVHQENVGGTIYFYPT-ANAQNSQPVVNS 245
Score = 32.3 bits (70), Expect = 0.78
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2
Query: 520 MDPSIFLPYAPPNGLPQESKLVTYM 446
MDP F +P NG+P ESKL TYM
Sbjct: 1 MDPIFF---SPTNGIPSESKLATYM 22
>AE014296-555|AAG22234.1| 742|Drosophila melanogaster CG11486-PA,
isoform A protein.
Length = 742
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2
Query: 247 STVHQENVGGTTYFYSTNSDSLNTTSGLNS 158
++VHQENVGGT YFY T +++ N+ +NS
Sbjct: 217 TSVHQENVGGTIYFYPT-ANAQNSQPVVNS 245
Score = 32.3 bits (70), Expect = 0.78
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2
Query: 520 MDPSIFLPYAPPNGLPQESKLVTYM 446
MDP F +P NG+P ESKL TYM
Sbjct: 1 MDPIFF---SPTNGIPSESKLATYM 22
>AE014296-551|AAN11526.1| 757|Drosophila melanogaster CG11486-PL,
isoform L protein.
Length = 757
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2
Query: 247 STVHQENVGGTTYFYSTNSDSLNTTSGLNS 158
++VHQENVGGT YFY T +++ N+ +NS
Sbjct: 232 TSVHQENVGGTIYFYPT-ANAQNSQPVVNS 260
Score = 32.3 bits (70), Expect = 0.78
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2
Query: 520 MDPSIFLPYAPPNGLPQESKLVTYM 446
MDP F +P NG+P ESKL TYM
Sbjct: 16 MDPIFF---SPTNGIPSESKLATYM 37
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,769,659
Number of Sequences: 53049
Number of extensions: 770344
Number of successful extensions: 1645
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1645
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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