Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13b12
(816 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031603-1|AAH31603.1| 422|Homo sapiens ALS2CR12 protein protein. 36 0.18
U25725-1|AAA86889.1| 1017|Homo sapiens AH antigen protein. 36 0.23
U30872-1|AAA82935.1| 3113|Homo sapiens mitosin protein. 35 0.31
U19769-1|AAA82889.1| 3210|Homo sapiens CENP-F kinetochore protei... 35 0.31
AL445666-1|CAH71810.1| 3114|Homo sapiens centromere protein F, 3... 35 0.31
AL445305-6|CAH73032.1| 3114|Homo sapiens centromere protein F, 3... 35 0.31
AY396742-1|AAR91620.1| 784|Homo sapiens repetin protein. 34 0.53
AY219924-1|AAP48705.1| 784|Homo sapiens repetin protein. 34 0.53
U53445-1|AAA98972.1| 752|Homo sapiens DOC1 protein. 33 1.6
BC027860-1|AAH27860.1| 893|Homo sapiens filamin A interacting p... 33 1.6
AY642382-1|AAV34207.1| 1135|Homo sapiens GPBP-interacting protei... 33 1.6
AF514869-1|AAQ08179.1| 1133|Homo sapiens GPBP-interacting protei... 33 1.6
AF514868-1|AAQ08178.1| 1133|Homo sapiens GPBP-interacting protei... 33 1.6
AF514867-1|AAQ08177.1| 1135|Homo sapiens GPBP-interacting protei... 33 1.6
AF494040-1|AAM12861.1| 4116|Homo sapiens axonemal heavy chain dy... 33 1.6
AF329092-1|AAN16206.1| 764|Homo sapiens GPBP-interacting protei... 33 1.6
L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated prote... 32 2.9
AC007256-2|AAY24226.1| 445|Homo sapiens unknown protein. 32 2.9
AB053314-1|BAB69022.1| 445|Homo sapiens ALS2CR12 protein. 32 2.9
U80759-1|AAB91450.1| 182|Homo sapiens CAGH4 alternate open read... 31 3.8
U27109-1|AAC52065.1| 1228|Homo sapiens prepromultimerin protein. 31 3.8
BC063848-1|AAH63848.1| 1228|Homo sapiens multimerin 1 protein. 31 3.8
AC093759-2|AAY40957.1| 1228|Homo sapiens unknown protein. 31 3.8
AL512506-1|CAI16114.1| 273|Homo sapiens novel protein protein. 31 5.0
BC033900-1|AAH33900.1| 335|Homo sapiens NDE1 protein protein. 31 6.6
BC001421-1|AAH01421.1| 335|Homo sapiens nudE nuclear distributi... 31 6.6
AY295769-1|AAP49447.1| 1349|Homo sapiens hypothetical protein FL... 31 6.6
AL442071-4|CAH73671.1| 5938|Homo sapiens microtubule-actin cross... 31 6.6
AL365277-12|CAI16422.1| 5938|Homo sapiens microtubule-actin cros... 31 6.6
AL137853-3|CAI21816.1| 5938|Homo sapiens microtubule-actin cross... 31 6.6
AK056672-1|BAB71248.1| 600|Homo sapiens protein ( Homo sapiens ... 31 6.6
AK000108-1|BAA90949.1| 335|Homo sapiens protein ( Homo sapiens ... 31 6.6
AF325341-2|AAL38997.1| 5314|Homo sapiens macrophin 1 isoform 4 p... 31 6.6
AF317696-1|AAL09459.1| 5938|Homo sapiens macrophin 1 isoform 4 p... 31 6.6
>BC031603-1|AAH31603.1| 422|Homo sapiens ALS2CR12 protein protein.
Length = 422
Score = 35.9 bits (79), Expect = 0.18
Identities = 44/222 (19%), Positives = 94/222 (42%), Gaps = 11/222 (4%)
Frame = -2
Query: 686 SDQVYHLNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGERD 507
SD ++E+ ++ RD S L +++ L M+ NF+NK+ L E E
Sbjct: 128 SDLEEQISELTAIIEQMNRDHQSAQKLLSSEMDLRCAEMKQNFENKNRELKEAH-EAELS 186
Query: 506 DLRDKIESVLKHVK-----KLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNML 342
+L + ++ LK K KL +++ F+ + +++ E + ++ AK
Sbjct: 187 ELENNYKAALKAEKLAAQEKLEEMGKEYKYLKNMFRTYQDSIYDEMEEKWSKQKAKWKKD 246
Query: 341 QSAEKLKTAIVTESKNGTVTFPRDITKHQH------LAIFSERIDDRIKLAFVLGQERHF 180
+ E+ + ++ + K T F + + A+F I ++ +L L Q +
Sbjct: 247 EKFER-ENILLQQKKKMTKKFEMESGEEDKKINESCSAVFENFIQEKEEL---LKQHQSD 302
Query: 179 RKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRK 54
+ EV+ + +H L+ ++ +N LY +++K
Sbjct: 303 TLQLEELRKTKEVMQEELHAQALI-LESLNTNLYYTQLELQK 343
>U25725-1|AAA86889.1| 1017|Homo sapiens AH antigen protein.
Length = 1017
Score = 35.5 bits (78), Expect = 0.23
Identities = 26/108 (24%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Frame = -2
Query: 596 KQGLLKILMRLNFDNKSNALLHL-----QTEGERDDLRDKIESVLKHVKKLNTNSEKFMV 432
++G+ K+ +R+ D K LH+ + +GE D L+DK+E++ + ++ N E ++
Sbjct: 21 RRGIEKLRVRIEADEKKQ--LHIAEKLKERDGENDSLKDKVENLERELQMSEENQELVIL 78
Query: 431 THETFKNDV---GNRFEQFELRLNELDAKLNMLQSAEKLKTAIVTESK 297
E K +V + E+ L + L L+S ++ T + E +
Sbjct: 79 DAENSKAEVETLKTQIEEMARSLKVFELDLVTLRSEKENLTKQIQEKQ 126
>U30872-1|AAA82935.1| 3113|Homo sapiens mitosin protein.
Length = 3113
Score = 35.1 bits (77), Expect = 0.31
Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Frame = -2
Query: 596 KQGLLKILMRLNFDNKSNALLHL-----QTEGERDDLRDKIESVLKHVKKLNTNSEKFMV 432
++G+ K+ +R+ D K LH+ + E E D L+DK+E++ + ++ N E ++
Sbjct: 2117 RRGIEKLRVRIEADEKKQ--LHIAEKLKERERENDSLKDKVENLERELQMSEENQELVIL 2174
Query: 431 THETFKNDV---GNRFEQFELRLNELDAKLNMLQSAEKLKTAIVTESKNGTVTFPRDITK 261
E K +V + E+ L + L L+S ++ T + E + + ++
Sbjct: 2175 DAENSKAEVETLKTQIEEMARSLKVFELDLVTLRSEKENLTKQIQEKQGQLSELDKLLSS 2234
Query: 260 HQHLAIFSERIDDRIK 213
+ L E+ + +IK
Sbjct: 2235 FKSLLEEKEQAEIQIK 2250
>U19769-1|AAA82889.1| 3210|Homo sapiens CENP-F kinetochore protein
protein.
Length = 3210
Score = 35.1 bits (77), Expect = 0.31
Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Frame = -2
Query: 596 KQGLLKILMRLNFDNKSNALLHL-----QTEGERDDLRDKIESVLKHVKKLNTNSEKFMV 432
++G+ K+ +R+ D K LH+ + E E D L+DK+E++ + ++ N E ++
Sbjct: 2214 RRGIEKLRVRIEADEKKQ--LHIAEKLKERERENDSLKDKVENLERELQMSEENQELVIL 2271
Query: 431 THETFKNDV---GNRFEQFELRLNELDAKLNMLQSAEKLKTAIVTESKNGTVTFPRDITK 261
E K +V + E+ L + L L+S ++ T + E + + ++
Sbjct: 2272 DAENSKAEVETLKTQIEEMARSLKVFELDLVTLRSEKENLTKQIQEKQGQLSELDKLLSS 2331
Query: 260 HQHLAIFSERIDDRIK 213
+ L E+ + +IK
Sbjct: 2332 FKSLLEEKEQAEIQIK 2347
>AL445666-1|CAH71810.1| 3114|Homo sapiens centromere protein F,
350/400ka (mitosin) protein.
Length = 3114
Score = 35.1 bits (77), Expect = 0.31
Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Frame = -2
Query: 596 KQGLLKILMRLNFDNKSNALLHL-----QTEGERDDLRDKIESVLKHVKKLNTNSEKFMV 432
++G+ K+ +R+ D K LH+ + E E D L+DK+E++ + ++ N E ++
Sbjct: 2118 RRGIEKLRVRIEADEKKQ--LHIAEKLKERERENDSLKDKVENLERELQMSEENQELVIL 2175
Query: 431 THETFKNDV---GNRFEQFELRLNELDAKLNMLQSAEKLKTAIVTESKNGTVTFPRDITK 261
E K +V + E+ L + L L+S ++ T + E + + ++
Sbjct: 2176 DAENSKAEVETLKTQIEEMARSLKVFELDLVTLRSEKENLTKQIQEKQGQLSELDKLLSS 2235
Query: 260 HQHLAIFSERIDDRIK 213
+ L E+ + +IK
Sbjct: 2236 FKSLLEEKEQAEIQIK 2251
>AL445305-6|CAH73032.1| 3114|Homo sapiens centromere protein F,
350/400ka (mitosin) protein.
Length = 3114
Score = 35.1 bits (77), Expect = 0.31
Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Frame = -2
Query: 596 KQGLLKILMRLNFDNKSNALLHL-----QTEGERDDLRDKIESVLKHVKKLNTNSEKFMV 432
++G+ K+ +R+ D K LH+ + E E D L+DK+E++ + ++ N E ++
Sbjct: 2118 RRGIEKLRVRIEADEKKQ--LHIAEKLKERERENDSLKDKVENLERELQMSEENQELVIL 2175
Query: 431 THETFKNDV---GNRFEQFELRLNELDAKLNMLQSAEKLKTAIVTESKNGTVTFPRDITK 261
E K +V + E+ L + L L+S ++ T + E + + ++
Sbjct: 2176 DAENSKAEVETLKTQIEEMARSLKVFELDLVTLRSEKENLTKQIQEKQGQLSELDKLLSS 2235
Query: 260 HQHLAIFSERIDDRIK 213
+ L E+ + +IK
Sbjct: 2236 FKSLLEEKEQAEIQIK 2251
>AY396742-1|AAR91620.1| 784|Homo sapiens repetin protein.
Length = 784
Score = 34.3 bits (75), Expect = 0.53
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -1
Query: 378 AFERTRRQT*HAAVGRKIENRHRNGKQKWHGDVSA-RHYQTPAFGHIFGTHRRPHQTRFC 202
+F+++ RQ+ ++ G+K+ ++ +G+ KW G + A + P +G R Q
Sbjct: 193 SFDQSERQSQDSSSGKKVSHKSTSGQAKWQGHIFALNRCEKPIQDSHYGQSERHTQQSET 252
Query: 201 FGPRATFSQ 175
G + F+Q
Sbjct: 253 LGQASHFNQ 261
>AY219924-1|AAP48705.1| 784|Homo sapiens repetin protein.
Length = 784
Score = 34.3 bits (75), Expect = 0.53
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -1
Query: 378 AFERTRRQT*HAAVGRKIENRHRNGKQKWHGDVSA-RHYQTPAFGHIFGTHRRPHQTRFC 202
+F+++ RQ+ ++ G+K+ ++ +G+ KW G + A + P +G R Q
Sbjct: 193 SFDQSERQSQDSSSGKKVSHKSTSGQAKWQGHIFALNRCEKPIQDSHYGQSERHTQQSET 252
Query: 201 FGPRATFSQ 175
G + F+Q
Sbjct: 253 LGQASHFNQ 261
>U53445-1|AAA98972.1| 752|Homo sapiens DOC1 protein.
Length = 752
Score = 32.7 bits (71), Expect = 1.6
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Frame = -2
Query: 668 LNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGER-DDLRDK 492
L + F ++ L +L +F ++ + ++ D A LQ E + + +K
Sbjct: 225 LEKTEFTLKEDLTKLKTLTVMFVDERKTMSEKLKKTEDKLQAASSQLQVEQNKVTTVTEK 284
Query: 491 IESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNM----LQSAEK- 327
+ K K T+ E+ M + ++D+ N+ + E + N+L +++NM LQS E
Sbjct: 285 LIEETKRALKSKTDVEEKMYSVTKERDDLKNKLKAEEEKGNDLLSRVNMLKNRLQSLEAI 344
Query: 326 ----LKTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIK 213
LK + +S T ++ K + L+ ER+ ++K
Sbjct: 345 EKDFLKNKLNQDSGKSTTALHQENNKIKELSQEVERLKLKLK 386
>BC027860-1|AAH27860.1| 893|Homo sapiens filamin A interacting
protein 1-like protein.
Length = 893
Score = 32.7 bits (71), Expect = 1.6
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Frame = -2
Query: 668 LNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGER-DDLRDK 492
L + F ++ L +L +F ++ + ++ D A LQ E + + +K
Sbjct: 239 LEKTEFTLKEDLTKLKTLTVMFVDERKTMSEKLKKTEDKLQAASSQLQVEQNKVTTVTEK 298
Query: 491 IESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNM----LQSAEK- 327
+ K K T+ E+ M + ++D+ N+ + E + N+L +++NM LQS E
Sbjct: 299 LIEETKRALKSKTDVEEKMYSVTKERDDLKNKLKAEEEKGNDLLSRVNMLKNRLQSLEAI 358
Query: 326 ----LKTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIK 213
LK + +S T ++ K + L+ ER+ ++K
Sbjct: 359 EKDFLKNKLNQDSGKSTTALHQENNKIKELSQEVERLKLKLK 400
>AY642382-1|AAV34207.1| 1135|Homo sapiens GPBP-interacting protein
130d protein.
Length = 1135
Score = 32.7 bits (71), Expect = 1.6
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Frame = -2
Query: 668 LNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGER-DDLRDK 492
L + F ++ L +L +F ++ + ++ D A LQ E + + +K
Sbjct: 479 LEKTEFTLKEDLTKLKTLTVMFVDERKTMSEKLKKTEDKLQAASSQLQVEQNKVTTVTEK 538
Query: 491 IESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNM----LQSAEK- 327
+ K K T+ E+ M + ++D+ N+ + E + N+L +++NM LQS E
Sbjct: 539 LIEETKRALKSKTDVEEKMYSVTKERDDLKNKLKAEEEKGNDLLSRVNMLKNRLQSLEAI 598
Query: 326 ----LKTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIK 213
LK + +S T ++ K + L+ ER+ ++K
Sbjct: 599 EKDFLKNKLNQDSGKSTTALHQENNKIKELSQEVERLKLKLK 640
>AF514869-1|AAQ08179.1| 1133|Homo sapiens GPBP-interacting protein
130c protein.
Length = 1133
Score = 32.7 bits (71), Expect = 1.6
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Frame = -2
Query: 668 LNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGER-DDLRDK 492
L + F ++ L +L +F ++ + ++ D A LQ E + + +K
Sbjct: 479 LEKTEFTLKEDLTKLKTLTVMFVDERKTMSEKLKKTEDKLQAASSQLQVEQNKVTTVTEK 538
Query: 491 IESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNM----LQSAEK- 327
+ K K T+ E+ M + ++D+ N+ + E + N+L +++NM LQS E
Sbjct: 539 LIEETKRALKSKTDVEEKMYSVTKERDDLKNKLKAEEEKGNDLLSRVNMLKNRLQSLEAI 598
Query: 326 ----LKTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIK 213
LK + +S T ++ K + L+ ER+ ++K
Sbjct: 599 EKDFLKNKLNQDSGKSTTALHQENNKIKELSQEVERLKLKLK 640
>AF514868-1|AAQ08178.1| 1133|Homo sapiens GPBP-interacting protein
130b protein.
Length = 1133
Score = 32.7 bits (71), Expect = 1.6
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Frame = -2
Query: 668 LNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGER-DDLRDK 492
L + F ++ L +L +F ++ + ++ D A LQ E + + +K
Sbjct: 479 LEKTEFTLKEDLTKLKTLTVMFVDERKTMSEKLKKTEDKLQAASSQLQVEQNKVTTVTEK 538
Query: 491 IESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNM----LQSAEK- 327
+ K K T+ E+ M + ++D+ N+ + E + N+L +++NM LQS E
Sbjct: 539 LIEETKRALKSKTDVEEKMYSVTKERDDLKNKLKAEEEKGNDLLSRVNMLKNRLQSLEAI 598
Query: 326 ----LKTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIK 213
LK + +S T ++ K + L+ ER+ ++K
Sbjct: 599 EKDFLKNKLNQDSGKSTTALHQENNKIKELSQEVERLKLKLK 640
>AF514867-1|AAQ08177.1| 1135|Homo sapiens GPBP-interacting protein
130a protein.
Length = 1135
Score = 32.7 bits (71), Expect = 1.6
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Frame = -2
Query: 668 LNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGER-DDLRDK 492
L + F ++ L +L +F ++ + ++ D A LQ E + + +K
Sbjct: 479 LEKTEFTLKEDLTKLKTLTVMFVDERKTMSEKLKKTEDKLQAASSQLQVEQNKVTTVTEK 538
Query: 491 IESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNM----LQSAEK- 327
+ K K T+ E+ M + ++D+ N+ + E + N+L +++NM LQS E
Sbjct: 539 LIEETKRALKSKTDVEEKMYSVTKERDDLKNKLKAEEEKGNDLLSRVNMLKNRLQSLEAI 598
Query: 326 ----LKTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIK 213
LK + +S T ++ K + L+ ER+ ++K
Sbjct: 599 EKDFLKNKLNQDSGKSTTALHQENNKIKELSQEVERLKLKLK 640
>AF494040-1|AAM12861.1| 4116|Homo sapiens axonemal heavy chain dynein
type 3 protein.
Length = 4116
Score = 32.7 bits (71), Expect = 1.6
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = -2
Query: 560 FDNKSNALLHLQTEGERDDLRDKIESVLK---HVKKLNTNSEKFMVTHETFKNDVGNRFE 390
FDN N LLH + + E D ++ E L+ + ++L + ++ ++T E K++V +
Sbjct: 768 FDNSRNLLLHKRDQAEMDLIKRCSEFELRLEGYHRELESFRKREVMTTEEMKHNV-EKLN 826
Query: 389 QFELRLNELDAKLNMLQSAEKL 324
+ LN A+ ++ E+L
Sbjct: 827 ELSKNLNRAFAEFELINKEEEL 848
>AF329092-1|AAN16206.1| 764|Homo sapiens GPBP-interacting protein
90 protein.
Length = 764
Score = 32.7 bits (71), Expect = 1.6
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Frame = -2
Query: 668 LNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGER-DDLRDK 492
L + F ++ L +L +F ++ + ++ D A LQ E + + +K
Sbjct: 479 LEKTEFTLKEDLTKLKTLTVMFVDERKTMSEKLKKTEDKLQAASSQLQVEQNKVTTVTEK 538
Query: 491 IESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNM----LQSAEK- 327
+ K K T+ E+ M + ++D+ N+ + E + N+L +++NM LQS E
Sbjct: 539 LIEETKRALKSKTDVEEKMYSVTKERDDLKNKLKAEEEKGNDLLSRVNMLKNRLQSLEAI 598
Query: 326 ----LKTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIK 213
LK + +S T ++ K + L+ ER+ ++K
Sbjct: 599 EKDFLKNKLNQDSGKSTTALHQENNKIKELSQEVERLKLKLK 640
>L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated protein
protein.
Length = 1410
Score = 31.9 bits (69), Expect = 2.9
Identities = 24/101 (23%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Frame = -2
Query: 512 RDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELD----AKLNM 345
+++L D+++ H++ ++ +++ ET N++ ++ + + ++++LD AK +
Sbjct: 595 QENLHDQVQEQKAHLRA----AQDRVLSLETSVNELNSQLNESKEKVSQLDIQIKAKTEL 650
Query: 344 LQSAEKLKTAIVTESKNGTVTFPRDI-TKHQHLAIFSERID 225
L SAE KTA + +N T + KHQ L + ++D
Sbjct: 651 LLSAEAAKTAQRADLQNHLDTAQNALQDKHQELNKITTQLD 691
>AC007256-2|AAY24226.1| 445|Homo sapiens unknown protein.
Length = 445
Score = 31.9 bits (69), Expect = 2.9
Identities = 30/141 (21%), Positives = 62/141 (43%), Gaps = 5/141 (3%)
Frame = -2
Query: 686 SDQVYHLNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGERD 507
SD ++E+ ++ RD S L +++ L M+ NF+NK+ L E E
Sbjct: 128 SDLEEQISELTAIIEQMNRDHQSAQKLLSSEMDLRCAEMKQNFENKNRELKEAH-EAELS 186
Query: 506 DLRDKIESVLKHVK-----KLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNML 342
+L + ++ LK K KL +++ F+ + +++ E + ++ AK
Sbjct: 187 ELENNYKAALKAEKLAAQEKLEEMGKEYKYLKNMFRTYQDSIYDEMEEKWSKQKAKWKKD 246
Query: 341 QSAEKLKTAIVTESKNGTVTF 279
+ E+ + ++ + K T F
Sbjct: 247 EKFER-ENILLQQKKKMTKKF 266
>AB053314-1|BAB69022.1| 445|Homo sapiens ALS2CR12 protein.
Length = 445
Score = 31.9 bits (69), Expect = 2.9
Identities = 30/141 (21%), Positives = 62/141 (43%), Gaps = 5/141 (3%)
Frame = -2
Query: 686 SDQVYHLNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGERD 507
SD ++E+ ++ RD S L +++ L M+ NF+NK+ L E E
Sbjct: 128 SDLEEQISELTAIIEQMNRDHQSAQKLLSSEMDLRCAEMKQNFENKNRELKEAH-EAELS 186
Query: 506 DLRDKIESVLKHVK-----KLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNML 342
+L + ++ LK K KL +++ F+ + +++ E + ++ AK
Sbjct: 187 ELENNYKAALKAEKLAAQEKLEEMGKEYKYLKNMFRTYQDSIYDEMEEKWSKQKAKWKKD 246
Query: 341 QSAEKLKTAIVTESKNGTVTF 279
+ E+ + ++ + K T F
Sbjct: 247 EKFER-ENILLQQKKKMTKKF 266
>U80759-1|AAB91450.1| 182|Homo sapiens CAGH4 alternate open reading
frame protein.
Length = 182
Score = 31.5 bits (68), Expect = 3.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 652 FTSRNPNAISTRWAHCSRPSRGC 584
FT P A W CSRP+RGC
Sbjct: 60 FTPTQPRAPRPPWTPCSRPTRGC 82
>U27109-1|AAC52065.1| 1228|Homo sapiens prepromultimerin protein.
Length = 1228
Score = 31.5 bits (68), Expect = 3.8
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = -2
Query: 503 LRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNMLQSAEKL 324
+R KIE++ V LN ++ H +N+V R + E R+NE L M K
Sbjct: 674 IRKKIENLTSAVNSLNFIIKELTKRHNLLRNEVQGRDDALERRINEY--ALEMEDGLNKT 731
Query: 323 KTAI 312
T I
Sbjct: 732 MTII 735
>BC063848-1|AAH63848.1| 1228|Homo sapiens multimerin 1 protein.
Length = 1228
Score = 31.5 bits (68), Expect = 3.8
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = -2
Query: 503 LRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNMLQSAEKL 324
+R KIE++ V LN ++ H +N+V R + E R+NE L M K
Sbjct: 674 IRKKIENLTSAVNSLNFIIKELTKRHNLLRNEVQGRDDALERRINEY--ALEMEDGLNKT 731
Query: 323 KTAI 312
T I
Sbjct: 732 MTII 735
>AC093759-2|AAY40957.1| 1228|Homo sapiens unknown protein.
Length = 1228
Score = 31.5 bits (68), Expect = 3.8
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = -2
Query: 503 LRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNMLQSAEKL 324
+R KIE++ V LN ++ H +N+V R + E R+NE L M K
Sbjct: 674 IRKKIENLTSAVNSLNFIIKELTKRHNLLRNEVQGRDDALERRINEY--ALEMEDGLNKT 731
Query: 323 KTAI 312
T I
Sbjct: 732 MTII 735
>AL512506-1|CAI16114.1| 273|Homo sapiens novel protein protein.
Length = 273
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/64 (25%), Positives = 35/64 (54%)
Frame = -2
Query: 527 QTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLN 348
Q + + +L+DKI +V + + + E+ THE + ++ + ++++ L L ++N
Sbjct: 183 QVQEDITNLKDKIITVKESIIEKTCFLEEEKKTHEKLRKEIEVQHKRYDAILKRLHCQVN 242
Query: 347 MLQS 336
LQS
Sbjct: 243 KLQS 246
>BC033900-1|AAH33900.1| 335|Homo sapiens NDE1 protein protein.
Length = 335
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/65 (23%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = -2
Query: 503 LRDKIESVLKHVKKLNTNSEKF----MVTHETFKNDVGNRFEQFELRLNELDAKLNMLQS 336
++D+++ ++ +++ N + E+ +++ E F+ + E+ +ELD K N+L+S
Sbjct: 106 IKDQLQKYIRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLES 165
Query: 335 AEKLK 321
++LK
Sbjct: 166 VQRLK 170
>BC001421-1|AAH01421.1| 335|Homo sapiens nudE nuclear distribution
gene E homolog 1 (A. nidulans) protein.
Length = 335
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/65 (23%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = -2
Query: 503 LRDKIESVLKHVKKLNTNSEKF----MVTHETFKNDVGNRFEQFELRLNELDAKLNMLQS 336
++D+++ ++ +++ N + E+ +++ E F+ + E+ +ELD K N+L+S
Sbjct: 106 IKDQLQKYIRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLES 165
Query: 335 AEKLK 321
++LK
Sbjct: 166 VQRLK 170
>AY295769-1|AAP49447.1| 1349|Homo sapiens hypothetical protein
FLJ32110 protein.
Length = 1349
Score = 30.7 bits (66), Expect = 6.6
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 128 VHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNVVKE 3
VH NP I+ EK DK ++ K +R++ CTHNV +
Sbjct: 399 VHLNPNSRIEN-REKSLDKTERVSKNVQRLVKEACTHNVASK 439
>AL442071-4|CAH73671.1| 5938|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5938
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = -2
Query: 191 ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNV 12
E+ R+R + + + L D PL +Q I+ L ++ +R + K+V+D H++
Sbjct: 892 EKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHI 951
>AL365277-12|CAI16422.1| 5938|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5938
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = -2
Query: 191 ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNV 12
E+ R+R + + + L D PL +Q I+ L ++ +R + K+V+D H++
Sbjct: 892 EKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHI 951
>AL137853-3|CAI21816.1| 5938|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5938
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = -2
Query: 191 ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNV 12
E+ R+R + + + L D PL +Q I+ L ++ +R + K+V+D H++
Sbjct: 892 EKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHI 951
>AK056672-1|BAB71248.1| 600|Homo sapiens protein ( Homo sapiens
cDNA FLJ32110 fis, clone OCBBF2001527. ).
Length = 600
Score = 30.7 bits (66), Expect = 6.6
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 128 VHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNVVKE 3
VH NP I+ EK DK ++ K +R++ CTHNV +
Sbjct: 399 VHLNPNSRIEN-REKSLDKTERVSKNVQRLVKEACTHNVASK 439
>AK000108-1|BAA90949.1| 335|Homo sapiens protein ( Homo sapiens
cDNA FLJ20101 fis, clone COL04655. ).
Length = 335
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/65 (23%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = -2
Query: 503 LRDKIESVLKHVKKLNTNSEKF----MVTHETFKNDVGNRFEQFELRLNELDAKLNMLQS 336
++D+++ ++ +++ N + E+ +++ E F+ + E+ +ELD K N+L+S
Sbjct: 106 IKDQLQKYIRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLES 165
Query: 335 AEKLK 321
++LK
Sbjct: 166 VQRLK 170
>AF325341-2|AAL38997.1| 5314|Homo sapiens macrophin 1 isoform 4
protein.
Length = 5314
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = -2
Query: 191 ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNV 12
E+ R+R + + + L D PL +Q I+ L ++ +R + K+V+D H++
Sbjct: 892 EKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHI 951
>AF317696-1|AAL09459.1| 5938|Homo sapiens macrophin 1 isoform 4
protein.
Length = 5938
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = -2
Query: 191 ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNV 12
E+ R+R + + + L D PL +Q I+ L ++ +R + K+V+D H++
Sbjct: 892 EKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHI 951
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,642,809
Number of Sequences: 237096
Number of extensions: 2202652
Number of successful extensions: 5952
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 5637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5949
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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