Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13b07
(780 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 334 1e-90
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 268 1e-70
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 223 4e-57
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 183 5e-45
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 157 3e-37
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 148 1e-34
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 147 2e-34
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 147 3e-34
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 144 3e-33
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 127 3e-28
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 124 2e-27
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 123 4e-27
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 122 1e-26
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 103 5e-21
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 100 4e-20
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 100 5e-20
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 100 8e-20
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 92 2e-17
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 76 1e-12
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 70 8e-11
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 69 1e-10
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 68 3e-10
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 66 7e-10
UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal ... 64 3e-09
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 64 5e-09
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 63 9e-09
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 63 9e-09
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 62 1e-08
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 58 2e-07
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 57 6e-07
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 55 2e-06
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 46 8e-04
UniRef50_Q5AGI4 Cluster: Putative uncharacterized protein; n=2; ... 40 0.070
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 39 0.12
UniRef50_Q7KKH3 Cluster: Protein SDA1 homolog; n=4; Coelomata|Re... 38 0.37
UniRef50_A6GVL2 Cluster: Putative cell surface protein SprD; n=1... 37 0.65
UniRef50_Q28ZB7 Cluster: GA20803-PA; n=1; Drosophila pseudoobscu... 37 0.65
UniRef50_A6SNX0 Cluster: Predicted protein; n=1; Botryotinia fuc... 37 0.65
UniRef50_Q23TC4 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_UPI0000EBC685 Cluster: PREDICTED: similar to Hrnr prote... 35 2.0
UniRef50_Q9C5C0 Cluster: Mitogen-activated protein kinase 18; n=... 35 2.0
UniRef50_O60293 Cluster: Coiled-coil domain-containing protein 1... 35 2.0
UniRef50_UPI000150A5BE Cluster: hypothetical protein TTHERM_0006... 35 2.6
UniRef50_Q54WV7 Cluster: Putative uncharacterized protein; n=1; ... 35 2.6
UniRef50_Q6NE17 Cluster: Putative erythrocyte-binding protein MA... 34 3.5
UniRef50_Q23DJ6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.0
UniRef50_A2G612 Cluster: SNF7 family protein; n=2; Trichomonas v... 33 8.0
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 33 8.0
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 334 bits (822), Expect = 1e-90
Identities = 159/211 (75%), Positives = 184/211 (87%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
RR+KAWSD+LKVYKSQRLRAGKGKMRNRRR+ RKGPLII+NKDQGLTR+FRNIPGV+
Sbjct: 37 RRIKAWSDVLKVYKSQRLRAGKGKMRNRRRLHRKGPLIIYNKDQGLTRSFRNIPGVDMVN 96
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTR 419
LAPGGH+GRF+IWTQSAF RLD +FGSWKTPSK+KKNFNLPQPKMANTDL+R
Sbjct: 97 VNKLNLLHLAPGGHVGRFMIWTQSAFERLDAIFGSWKTPSKEKKNFNLPQPKMANTDLSR 156
Query: 418 LLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA 239
LLKS+EIR+VLRAP KRV+RATRKLNPLTN KAMLKLNPYAAVLK+KA+L+ +RKN +A
Sbjct: 157 LLKSEEIRRVLRAPIKRVVRATRKLNPLTNTKAMLKLNPYAAVLKKKAVLDQVKRKNKRA 216
Query: 238 LADAEKSGLKLSKRNPAMKAEKLRERRRKNI 146
L AEK G+KL +PA+KA KL+E+R K+I
Sbjct: 217 LEVAEKRGIKLPDDDPAVKALKLKEKRAKSI 247
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 268 bits (657), Expect = 1e-70
Identities = 128/209 (61%), Positives = 158/209 (75%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
RRLK W+DI KVYKSQR RAG+G MR+RRRI R+GPL++++KD+GL +AFRNIPG+E
Sbjct: 175 RRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETIN 234
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTR 419
LAPGGH+GRFVIWT+SAF RL+ LFG+WK PS KK +NLPQPKMANTDL+R
Sbjct: 235 VDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSR 294
Query: 418 LLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA 239
LLKS+EIRKVLR P KRV R+ R+LNPLTN + ++KLNPYA VLKR+A L +R K
Sbjct: 295 LLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAEKRTVAKV 354
Query: 238 LADAEKSGLKLSKRNPAMKAEKLRERRRK 152
LA A+K ++L+K + A A K R K
Sbjct: 355 LAKAKKQNVELAKSHFANVATKAAANRAK 383
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 223 bits (545), Expect = 4e-57
Identities = 108/203 (53%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 172 KKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLN 231
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTR 419
LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R
Sbjct: 232 VSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSR 291
Query: 418 LLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA 239
+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 292 ILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRV 351
Query: 238 -LADAEKSGLKLSKRNPAMKAEK 173
A A + L+ A A K
Sbjct: 352 DKAAAAAAALQAKSDEKAAVAGK 374
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 183 bits (445), Expect = 5e-45
Identities = 96/192 (50%), Positives = 128/192 (66%), Gaps = 3/192 (1%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
++L A++DI KV S+ +R+GKGKMRNRR +QR+GPL+++++D G+TRAFRNIPGVE
Sbjct: 175 KQLGAYADIEKVKASRNVRSGKGKMRNRRYVQRRGPLVVYSEDNGVTRAFRNIPGVELCS 234
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTR 419
LAPGGH+GRF+IWT+SAF +LD +FG+ + S KK + P MA TDLTR
Sbjct: 235 VDRLGLLTLAPGGHVGRFIIWTKSAFEKLDSIFGTSTSKSASKKGWKPPTNIMAQTDLTR 294
Query: 418 LLKSDEIRKVLRAPNKRVIR--ATRKLNPLTNNKAMLKLNPYAAVLKR-KAILELRRRKN 248
L+ SDEI+ L AP IR A K NPL N AM KLNPYA V + +A + R K
Sbjct: 295 LINSDEIQSALNAPKLGAIRAHAPLKRNPLKNKSAMDKLNPYAKVAREMQARAQEERSKA 354
Query: 247 LKALADAEKSGL 212
A ++A +S +
Sbjct: 355 KAAKSNAARSAV 366
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 157 bits (381), Expect = 3e-37
Identities = 83/173 (47%), Positives = 111/173 (64%), Gaps = 8/173 (4%)
Frame = -3
Query: 766 AWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG---LTRAFRNIPGVEXXXX 596
A +D K S++LRAGKGK+R RR QR+GPL+I+N D+ L +AFRNIPGVE
Sbjct: 155 AGADCEKAKNSRKLRAGKGKLRGRRHKQRRGPLVIYNPDEDGKELVKAFRNIPGVETSSV 214
Query: 595 XXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRL 416
LAPGGHLGRF++WT SAFG LD ++GS PS KK+F LP M DL+++
Sbjct: 215 YSMNLLQLAPGGHLGRFIVWTSSAFGALDTIYGSTTEPSALKKDFLLPSTMMKQPDLSKI 274
Query: 415 LKSDEIRKVLR-----APNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAI 272
+ S +I+KVLR A +KR + +K NPL N + L+LNPYAA ++ +
Sbjct: 275 INSSDIQKVLRPVRGGAVSKRGV--VQKKNPLKNFQVQLRLNPYAATFSKEKL 325
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 148 bits (359), Expect = 1e-34
Identities = 78/171 (45%), Positives = 109/171 (63%), Gaps = 6/171 (3%)
Frame = -3
Query: 766 AWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFN---KDQGLTRAFRNIPGVEXXXX 596
A D+ KV S++LRAGKGK+R RR QR+GPL++++ + L RAFRN+PGVE
Sbjct: 178 ALKDVEKVKDSRKLRAGKGKLRGRRHRQRRGPLVVYDGATDGKELVRAFRNLPGVETCDV 237
Query: 595 XXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRL 416
LAPGGHLGRF+IW+ SAF LD ++G+ PS KK+F LP ++ D+ RL
Sbjct: 238 YSLNLLQLAPGGHLGRFIIWSSSAFKALDNIYGTTTAPSALKKDFLLPSNVVSQADIGRL 297
Query: 415 LKSDEIRKVLRAPNKRVI--RA-TRKLNPLTNNKAMLKLNPYAAVLKRKAI 272
+ S E++ V+RA + RA +K NPL N + +L+LNPYAA ++ I
Sbjct: 298 INSSELQSVIRAAKGSALTKRAGVQKKNPLLNKQVLLRLNPYAAGYSKEKI 348
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 147 bits (357), Expect = 2e-34
Identities = 82/203 (40%), Positives = 119/203 (58%), Gaps = 2/203 (0%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FNKDQGLTRAFRNIPGVEXX 602
+R A+ D+ KV ++ +RAG K R ++ RKGPL++ FN++ L +AFRN+PGVE
Sbjct: 19 KRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVYFNENAKLLKAFRNVPGVEVV 78
Query: 601 XXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLT 422
LAPGG LGRFVIWTQSAF LD LFG+++ S K + L +P + N DL
Sbjct: 79 NVTRLNLLQLAPGGQLGRFVIWTQSAFANLDKLFGTYRYSSILKDGYQLLRPLLTNPDLA 138
Query: 421 RLLKSDEIR-KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNL 245
R++ S++++ KV A V+ +K NPL N+KA+ +LNPYA ++R
Sbjct: 139 RIINSNQVQEKVQAAKQTTVLHEVQKKNPLKNSKALDRLNPYAK----------KQRAAA 188
Query: 244 KALADAEKSGLKLSKRNPAMKAE 176
A A +G K K+N A+K +
Sbjct: 189 TAAVKAHTTGTKKIKKNKALKKQ 211
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 147 bits (356), Expect = 3e-34
Identities = 82/201 (40%), Positives = 118/201 (58%), Gaps = 2/201 (0%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FNKDQGLTRAFRNIPGVEXX 602
+R A+ D+ KV ++ +RAG K R ++ RKGPL++ FN++ L +AFRN+PGVE
Sbjct: 173 KRFGAFEDVQKVVSTKVVRAGISKQRGKKYRVRKGPLVVYFNENAKLLKAFRNVPGVEVV 232
Query: 601 XXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLT 422
LAPGG LGRFVIWTQSAF LD LFG+++ S K + L +P + N DL
Sbjct: 233 NVTRLNLLQLAPGGQLGRFVIWTQSAFAHLDKLFGTYRYASVLKDGYQLLRPLLTNPDLA 292
Query: 421 RLLKSDEIR-KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNL 245
R++ S++++ KV A +V+ +K NPL N KAM +LNPYA + A+ ++
Sbjct: 293 RIINSNQVQEKVQPAKTTKVLHDVQKKNPLKNTKAMDRLNPYAKKQRAAAVAAIK----- 347
Query: 244 KALADAEKSGLKLSKRNPAMK 182
A G K K+N A+K
Sbjct: 348 -----ANTKGTKKIKKNKALK 363
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 144 bits (348), Expect = 3e-33
Identities = 78/196 (39%), Positives = 121/196 (61%), Gaps = 2/196 (1%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIF-NKDQGLTRAFRNIPGVEXX 602
+++ A+SD+LKV S+ +RAG+GKMR R+ +RKGPL+++ N D +AFRNIPGV+
Sbjct: 173 KKINAYSDVLKVIASKTVRAGQGKMRGRKIKERKGPLVVYGNDDLQAVKAFRNIPGVDTC 232
Query: 601 XXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLT 422
LAPG H+GRF+IWT+SAF +L+ +FG+ K ++ K F + +MA D+
Sbjct: 233 RVENLSVLNLAPGCHIGRFIIWTESAFKKLNTIFGTQKKMAQGKSGFRIAHAQMAVPDMK 292
Query: 421 RLLKSDEIRKVLRAPNKRVI-RATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNL 245
R++ + E K+LRA K V+ + ++ NPL N AM+KLNPYA + K + +
Sbjct: 293 RVVVAAEKAKLLRA--KIVLPKVPKRANPLKNWAAMVKLNPYAKIASHKLAQVAKAQAAH 350
Query: 244 KALADAEKSGLKLSKR 197
KA A+ + +K+
Sbjct: 351 KAQYAAKMEKILAAKK 366
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 127 bits (307), Expect = 3e-28
Identities = 67/160 (41%), Positives = 99/160 (61%), Gaps = 6/160 (3%)
Frame = -3
Query: 772 LKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXX 593
LKA D+ +S+R+R G GK RNRR QR+G LI+ ++++GL AFRNI GV+
Sbjct: 174 LKASDDVKHSAESKRIRVGSGKARNRRYTQRRGVLIVHDQNEGLANAFRNISGVDISNVX 233
Query: 592 XXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLL 413
LAPGGHLGRF+IWT+ A+ +LD L+G+ + K + P P + NTDL+R++
Sbjct: 234 RLNIRDLAPGGHLGRFIIWTEGAYKKLDKLYGTRFRTALLKNEYKHPTPSVTNTDLSRII 293
Query: 412 KSDEIRKVLRA---PNKRVIRATRKL---NPLTNNKAMLK 311
S ++ VL+A +K++I R L + L+ N A +K
Sbjct: 294 HSPTVQSVLKARGKQSKKIINVRRNLLIASKLSQNNARIK 333
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 124 bits (300), Expect = 2e-27
Identities = 62/167 (37%), Positives = 98/167 (58%)
Frame = -3
Query: 757 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXX 578
++ ++ KS +LRA GKMRNR+ GPLII++ D G+ +AFRNIPGV+
Sbjct: 179 EVNRLIKSXKLRARXGKMRNRKYKISNGPLIIYSXDSGIKKAFRNIPGVDLCNVTKLNLL 238
Query: 577 XLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEI 398
LAPGG +GR IW++ AF +LD ++G KKN+ LP+P + N D+ R++ SD++
Sbjct: 239 KLAPGGSIGRLCIWSEDAFKKLDVIYGKTFQKYVTKKNYILPKPIVNNADIYRIINSDQV 298
Query: 397 RKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRR 257
+ L + T+ N LTN +LNP +L+ A+ ++++
Sbjct: 299 QASLLDKKSPCKKRTQNKNSLTNFAVRCRLNPAYKLLRALAVRKMKK 345
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 123 bits (297), Expect = 4e-27
Identities = 70/199 (35%), Positives = 106/199 (53%), Gaps = 5/199 (2%)
Frame = -3
Query: 757 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXX 578
++ ++ S +R GKGKMRNRRR+ GPL+++ +D G+ +A RNI GV+
Sbjct: 182 EMKRIESSIAIRCGKGKMRNRRRVCAVGPLVVYAEDNGIVKAMRNIKGVDTCSVERLNLL 241
Query: 577 XLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEI 398
LAPGG GR I+T+ A RL ++GS+ S K + LP+P M N D+TR++ S E+
Sbjct: 242 RLAPGGTFGRLTIFTKGAIKRLQEIYGSYTHGSSSKVGYTLPRPAMTNADITRIINSTEV 301
Query: 397 RKVLRAPN-----KRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALA 233
+ VLR + R+ K N LTN LNP L++ A L L A+
Sbjct: 302 QSVLRPLRGFRCMGSMGRSKTKKNNLTNLTKRACLNPAYTSLRKSARLAQIPGTRLHAIK 361
Query: 232 DAEKSGLKLSKRNPAMKAE 176
+K+ + K++ K+E
Sbjct: 362 QRQKAANRALKKSIKQKSE 380
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 122 bits (293), Expect = 1e-26
Identities = 60/159 (37%), Positives = 98/159 (61%)
Frame = -3
Query: 757 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXX 578
D+ + S+ +RAG+GKMRNRR I RKGPL+I+N + + R FRN+PGV+
Sbjct: 167 DVERCKDSRHIRAGRGKMRNRRYITRKGPLVIYNTED-VARGFRNLPGVDLCHVSSIRLL 225
Query: 577 XLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEI 398
LAPG H GR ++WT+SAF LD ++ + K+N+ LP+ + TD+ R+L+SD +
Sbjct: 226 ELAPGSHPGRLILWTKSAFASLDDVYAA-------KQNYTLPRSCITQTDIERILQSDAV 278
Query: 397 RKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKR 281
+K P + + RK++P ++ +A+ +L+P V+ +
Sbjct: 279 QKTF-VPKRDPLVIERKVDPFSSKEALARLDPSGTVMPK 316
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 103 bits (247), Expect = 5e-21
Identities = 52/118 (44%), Positives = 71/118 (60%)
Frame = -3
Query: 526 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 347
AF +LD L+G+W + K N+NLP KM NTDL+R+LKS EI++ L+AP K++ R K
Sbjct: 95 AFCKLDDLYGTWHKAASLKSNYNLPMHKMLNTDLSRILKSPEIQRALQAPRKKIHRRVLK 154
Query: 346 LNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEK 173
NPL N MLKLNPYA ++R I LR+ KN K D + L+ + +K
Sbjct: 155 KNPLKNLGIMLKLNPYAKTMRRNTI--LRQAKNHKLRMDKSAAALEAKSEEKGVPGKK 210
Score = 50.4 bits (115), Expect = 5e-05
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRN 698
++LKAW+DI KVY SQR+RAGKGKMRN
Sbjct: 35 KKLKAWNDIKKVYASQRMRAGKGKMRN 61
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 100 bits (240), Expect = 4e-20
Identities = 54/134 (40%), Positives = 75/134 (55%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
R L ++ +V KS+ +R GKGKMRNRR QRKG LI+ + + FRNI GV+
Sbjct: 169 RNLNMTEELKRVEKSRGVRCGKGKMRNRRYTQRKGILIVHGESSEML-GFRNIRGVDQMS 227
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTR 419
LAPGG GR +IWT+SAF +LD +FG + ++ F LP + + DL
Sbjct: 228 IDSLDLLELAPGGVAGRLIIWTESAFEKLDKIFGGVEREAELTPGFKLPNRIVTHDDLEE 287
Query: 418 LLKSDEIRKVLRAP 377
L SD ++ +L P
Sbjct: 288 LFYSDAVQAILDEP 301
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 100 bits (239), Expect = 5e-20
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG-LTRAFRNIPGVEXX 602
++ A+ D K S + GKGKMRNRR I RKGPLI++ + L +AFRNIPGVE
Sbjct: 35 KQFDAYLDTEKAKDSHAIHPGKGKMRNRRYISRKGPLIVYGMEGAKLVKAFRNIPGVEVA 94
Query: 601 XXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKK 467
LAPGGHLGRFVIWT+S+F +LD ++ S++ ++++
Sbjct: 95 NVDRLNLLKLAPGGHLGRFVIWTKSSFEKLDSIYRSFEKKLRRRR 139
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 99.5 bits (237), Expect = 8e-20
Identities = 63/193 (32%), Positives = 102/193 (52%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
+++ + D+ +V R+ KGK R +KGPL+I+N+D+G+ +AFRNIPGVE
Sbjct: 169 KKVGVYGDVQRVLDGSVHRSSKGKFRRAAYKTKKGPLVIYNEDKGIVKAFRNIPGVETIS 228
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTR 419
LAP +GR +WT+SAF LD ++ S KK F+LP+ M N D+
Sbjct: 229 VKALALAKLAPAAQVGRLTVWTESAFKALDGIYES-------KKRFSLPRSIMTNADIEA 281
Query: 418 LLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA 239
++ SD ++ VL K V+ PL + KL+ A +KA+ E+ L+A
Sbjct: 282 VITSDAVQSVLN-EKKEVV-------PLPKCRCCKKLSVGACEDWQKALKEV---AELRA 330
Query: 238 LADAEKSGLKLSK 200
+A+++ ++ K
Sbjct: 331 AQEAKRTSPEVVK 343
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 91.9 bits (218), Expect = 2e-17
Identities = 63/160 (39%), Positives = 86/160 (53%), Gaps = 1/160 (0%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
++LKAW+DI KVY SQR+RAGKGKMRNRR IQR+G II+N+D G+ +A +E
Sbjct: 113 KKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRGSCIIYNEDNGIIKASET--SLESLY 170
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTR 419
G W ++A L ++ P + N +L +R
Sbjct: 171 LIAFCKLDDLYG-------TWPKAA-----SLKSNYNLPMHKMLNTDL----------SR 208
Query: 418 LLKSDEIRKVLRAPNKRV-IRATRKLNPLTNNKAMLKLNP 302
+LK I++ LRAP KR+ R +K NPL N + MLKLNP
Sbjct: 209 ILKRPGIQRALRAPRKRIHRRVLKKKNPLKNLRLMLKLNP 248
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/85 (38%), Positives = 53/85 (62%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
R + ++D+ + + +R RAG+GKMR RR +++K L++ KD G+ +A +N+PGV+
Sbjct: 159 RAIGVYADVERAKERKRYRAGRGKMRGRRYVKKKSVLLVVGKDDGVVKAAKNLPGVDAVV 218
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSA 524
LAPG H GR +WT+SA
Sbjct: 219 VKDLNVELLAPGCHPGRLTVWTKSA 243
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 69.7 bits (163), Expect = 8e-11
Identities = 33/86 (38%), Positives = 51/86 (59%)
Frame = -3
Query: 757 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXX 578
DI++ K +++++GKGK+R R+ KGPL++ D+G++ RN GV+
Sbjct: 169 DIVRAKKGRKIKSGKGKLRGRKYRTPKGPLVVVGNDRGISLGARNHAGVDVVEVNNINAE 228
Query: 577 XLAPGGHLGRFVIWTQSAFGRLDPLF 500
LAPG H GR I+T+SA +L LF
Sbjct: 229 LLAPGTHAGRLTIYTKSAIEKLGDLF 254
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 69.3 bits (162), Expect = 1e-10
Identities = 33/89 (37%), Positives = 50/89 (56%)
Frame = -3
Query: 763 WSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXX 584
W+D+ + ++R+RAGKGK R RR ++ K LI+ ++D+G+ RN PGV+
Sbjct: 171 WADVERAKSNRRIRAGKGKRRGRRYVKPKSVLIVVDEDEGIKLGARNHPGVDVVEAMHLG 230
Query: 583 XXXLAPGGHLGRFVIWTQSAFGRLDPLFG 497
LAPG H GR ++T A L+ G
Sbjct: 231 VEHLAPGAHPGRLTVFTPGALEVLEERLG 259
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 67.7 bits (158), Expect = 3e-10
Identities = 47/131 (35%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Frame = -3
Query: 733 QRLRAGKGKMRNRRRIQRKGPLIIFNKD--QGLTRAFRNIPGVEXXXXXXXXXXXLAPGG 560
+R+ G+ R+ R+ + GPLII +G RAFRNIPGVE LAP G
Sbjct: 180 KRIDKVTGRARDGRKKRPVGPLIILRATAVEG-KRAFRNIPGVEVACVERLNLLKLAPAG 238
Query: 559 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRA 380
LGR +W++SAF LD +P + N DL+ L++S ++ LRA
Sbjct: 239 ALGRLCVWSKSAFEALDDYIKM------------MPTKLLKNADLSALIESTPVQAALRA 286
Query: 379 PNKRVIRATRK 347
P + +ATRK
Sbjct: 287 PREGTPKATRK 297
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 66.5 bits (155), Expect = 7e-10
Identities = 32/84 (38%), Positives = 48/84 (57%)
Frame = -3
Query: 760 SDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXX 581
+D+ + + +RAGKG MR R+ K L++ ++ GL +A RNIPGV+
Sbjct: 221 ADLDRARTGRTIRAGKGTMRGRKYRTPKSILLVVSQTNGLAKAARNIPGVDIVVAKDLSA 280
Query: 580 XXLAPGGHLGRFVIWTQSAFGRLD 509
LAPGG GR +WT++A G L+
Sbjct: 281 EDLAPGGDAGRLTVWTKAAIGALE 304
>UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal
protein L4; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L4 - Rattus norvegicus
Length = 140
Score = 64.5 bits (150), Expect = 3e-09
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Frame = -3
Query: 445 KMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL- 269
KM N+DL+R+LK EI++ L+AP K + K NPLTN + MLKLNP A + R IL
Sbjct: 3 KMMNSDLSRILKIPEIQRALQAPCKEIQHRVSKKNPLTNLRIMLKLNPDAKTMHRNTILP 62
Query: 268 ELRRRK-NLKALADAEKSGLKLS---KRNPAMKAEKLRERRRK 152
E R K +K+ ++G +L R A K + RK
Sbjct: 63 EARNHKLQVKSRKQQPRTGSQLGAGCSRGTADKKPAIGREERK 105
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 63.7 bits (148), Expect = 5e-09
Identities = 32/86 (37%), Positives = 50/86 (58%)
Frame = -3
Query: 760 SDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXX 581
+ I++ ++L++GKGKMRNRR + GPL++F + ++ RNI ++
Sbjct: 172 NSIVRNKLKRKLKSGKGKMRNRRFKKPTGPLLVFKNN---LKSLRNIANIDCMKISALNL 228
Query: 580 XXLAPGGHLGRFVIWTQSAFGRLDPL 503
LAPGGHLGR IW+ AF L+ +
Sbjct: 229 TKLAPGGHLGRLCIWSSKAFQMLNTI 254
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 62.9 bits (146), Expect = 9e-09
Identities = 31/73 (42%), Positives = 47/73 (64%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
+ + A D+ +V S+ +RAG+GKMRNRR + R+GP+++ ++G TRAFRNI G++
Sbjct: 171 KAIAAIDDVNRVNDSREIRAGRGKMRNRRYVARRGPMLVMPNNKG-TRAFRNIFGLDLAN 229
Query: 598 XXXXXXXXLAPGG 560
LAPGG
Sbjct: 230 VSALTLLHLAPGG 242
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 62.9 bits (146), Expect = 9e-09
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FNKDQGLTRAFRNIPGVEXX 602
+++ + D+ +V + R+RAGKGKMR R+ + GPLII + + + +A RN+ GV+
Sbjct: 168 KKIGVYDDVERVKERIRIRAGKGKMRGRKYKEPIGPLIIVHDSNSPIIKAARNLAGVDVV 227
Query: 601 XXXXXXXXXLAPGGHLGRFVIWTQSAFGRLD 509
LAPG H GR I+T+S+ LD
Sbjct: 228 NAKDVSVIHLAPGAHPGRLTIYTESSIKILD 258
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 62.5 bits (145), Expect = 1e-08
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = -3
Query: 772 LKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK-DQGLTRAFRNIPGVEXXXX 596
L W D+ + + ++RAGKGKMR RR + K L++ + + L A RN PGV+
Sbjct: 191 LGLWPDVERAAEGVKIRAGKGKMRGRRYKEPKSVLVVVSDLNAPLIAAVRNFPGVDVVAV 250
Query: 595 XXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLF 500
LAPGG GR +WT A +L LF
Sbjct: 251 NNLNILVLAPGGVPGRLTLWTAPAVEKLRGLF 282
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 58.4 bits (135), Expect = 2e-07
Identities = 33/89 (37%), Positives = 48/89 (53%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
+ L + DI + + + +RAG+GKMR RR Q K LI+ + +AFR++PGV+
Sbjct: 163 KNLGVYEDIERSREGKHIRAGRGKMRGRRYKQPKSVLIVARNSSAM-KAFRSLPGVDIAS 221
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRL 512
LAPGG GR I+T+ A L
Sbjct: 222 PNSLSIRKLAPGGVGGRLTIFTEGAIESL 250
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 56.8 bits (131), Expect = 6e-07
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = -3
Query: 757 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK-DQGLTRAFRNIPGVEXXXXXXXXX 581
++ +VY+ +R RAGKGK R R I+RKGPLI+ N ++ L +A NIPG++
Sbjct: 180 ELERVYEIKR-RAGKGKRRGRAYIERKGPLIVVNDYNEQLFKAVDNIPGLDIEEVPNLNV 238
Query: 580 XXLAPGGHLGRFVIWTQSAFGRL 512
LAPG GR +I ++ A L
Sbjct: 239 ELLAPGAKPGRLLIISKDALETL 261
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 54.8 bits (126), Expect = 2e-06
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = -3
Query: 763 WSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG-LTRAFRNIPGVEXXXXXXX 587
+ D+L+ + +R AGKGKMR RR K L + + L A + +PGV+
Sbjct: 179 YEDVLRAKEGKRYNAGKGKMRGRRYKVPKSVLFVLEDPRSPLALAVKGMPGVDVVTPTLL 238
Query: 586 XXXXLAPGGHLGRFVIWTQSAFGRLDPLF 500
LAPGGH GR I+T A L F
Sbjct: 239 SVLHLAPGGHPGRLTIYTTEALKLLSRRF 267
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 46.4 bits (105), Expect = 8e-04
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Frame = -3
Query: 703 RNRRRIQRK--GPLIIFNKD--QGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLGRFVIW 536
R +R+ +++ GPL++ +G RAFRNIPGV+ LAP G LGR VI+
Sbjct: 187 RTKRKGKKRPVGPLVVMRSTAVEG-KRAFRNIPGVDVMSVEHMNLLKLAPAGTLGRLVIF 245
Query: 535 TQSAFGRLD 509
++SAF LD
Sbjct: 246 SKSAFELLD 254
>UniRef50_Q5AGI4 Cluster: Putative uncharacterized protein; n=2;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 197
Score = 39.9 bits (89), Expect = 0.070
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = -3
Query: 388 LRAPNKRV-IRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGL 212
+R +KR+ IR ++K+ + + + M + N +KRK I+ +++R+N+K + +K
Sbjct: 1 MRERSKRIMIRRSKKIMNMKSKRNMKERNKKIMNVKRK-IMNMKKRRNMKKRRNMKKRKN 59
Query: 211 KLSKRNPAMKAEKLRERRRK 152
+RN K +K ER++K
Sbjct: 60 MKKRRNMKRKRKKTMERKKK 79
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 39.1 bits (87), Expect = 0.12
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = -3
Query: 730 RLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXLAPGGHLG 551
+++AG+G R R+ +R ++ D+ T A RN+ G + LAPGG G
Sbjct: 173 KIKAGQGSARGRK-YRRPASILFVTSDEPSTAA-RNLAGADVATASEVNTEDLAPGGAPG 230
Query: 550 RFVIWTQSAFGRL 512
R ++T+SA +
Sbjct: 231 RLTVFTESALAEV 243
>UniRef50_Q7KKH3 Cluster: Protein SDA1 homolog; n=4; Coelomata|Rep:
Protein SDA1 homolog - Drosophila melanogaster (Fruit
fly)
Length = 712
Score = 37.5 bits (83), Expect = 0.37
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = -3
Query: 478 KQKKNFNLPQPKMANTDL--TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA-MLKL 308
K+KK+ + K A +L TR+ ++ +++ A K+ + + RK PL ++A +KL
Sbjct: 566 KEKKDMRILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKL 624
Query: 307 NPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAMKAEKLRERRRKN 149
N + K++ + R + ++A D E+ G K + N +R+ KN
Sbjct: 625 NSIEMIYKKRKHDKESRLETVQAGRQDRERFGWKDGRVNEHCSKTNREKRKTKN 678
>UniRef50_A6GVL2 Cluster: Putative cell surface protein SprD; n=1;
Flavobacterium psychrophilum JIP02/86|Rep: Putative cell
surface protein SprD - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 1286
Score = 36.7 bits (81), Expect = 0.65
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = -3
Query: 373 KRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRN 194
K +++AT+K NP T N + K P +R L L+ K+ KA A+AEK +
Sbjct: 310 KPIVKATKKTNPGTKNATVNKKTPADLQKERAEALALKTEKD-KARAEAEKVRKAKELAD 368
Query: 193 PAMKAEKLRERRR 155
KAE L R+
Sbjct: 369 AKEKAEVLAALRK 381
>UniRef50_Q28ZB7 Cluster: GA20803-PA; n=1; Drosophila
pseudoobscura|Rep: GA20803-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 655
Score = 36.7 bits (81), Expect = 0.65
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Frame = -3
Query: 499 GSWKTPSKQKKNFNLPQPKMANTDL--TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNN 326
G W T + + + K A +L TR+ ++ +++ A K+ + +RK PL +
Sbjct: 502 GQWVTVNHSDGDLKILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTNSRK-RPLEQD 560
Query: 325 KA-MLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAMKAEKLRERRRK 152
+A +KLN + K++ + R + ++A D E+ G K + N +R+ K
Sbjct: 561 RAEFVKLNSIEMIFKKRKHDKESRMETVQAGRQDRERFGWKDGRVNEHCSKTNSEKRKTK 620
Query: 151 N 149
N
Sbjct: 621 N 621
>UniRef50_A6SNX0 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 1521
Score = 36.7 bits (81), Expect = 0.65
Identities = 26/91 (28%), Positives = 47/91 (51%)
Frame = -3
Query: 424 TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNL 245
TRL+ E R+ + A N++ ++A + +N+A L+ A+ KR +E R+RK
Sbjct: 975 TRLISQAE-REEIEA-NRQRVQAAAQARKENSNRARLEGRKAASAKKRT--VEYRKRKEK 1030
Query: 244 KALADAEKSGLKLSKRNPAMKAEKLRERRRK 152
+ + +A K G L + +KL E+R +
Sbjct: 1031 ELIEEAHKEGRILGNSELEARLDKLMEKRER 1061
>UniRef50_Q23TC4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 966
Score = 35.9 bits (79), Expect = 1.1
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Frame = -3
Query: 451 QPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAI 272
Q K AN + RLL S+ + ++P+ ++ KLNP++ N + L LN + L +K++
Sbjct: 330 QHKRANIQV-RLLSSEISKNQSQSPSNNILNQQNKLNPISTNTSQL-LNKQISQLNQKSL 387
Query: 271 LELRRRKNLKALADAEK-SGLKLSKRNPAMKAEKLRERRRKN 149
+ + + ++ A S + S +N ++ R +KN
Sbjct: 388 TQRSQILSKSPISQAANISSMYFSPQNKNSIFQRDRSISQKN 429
>UniRef50_UPI0000EBC685 Cluster: PREDICTED: similar to Hrnr protein;
n=1; Bos taurus|Rep: PREDICTED: similar to Hrnr protein
- Bos taurus
Length = 1606
Score = 35.1 bits (77), Expect = 2.0
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 543 SSGLSPHSAGLTPYSGHGRHHRNKRRTSTCPSQR 442
SSG H +GL+ S +G+H R++S+C QR
Sbjct: 566 SSGFGQHGSGLSQSSSYGQHGSTSRQSSSCGQQR 599
>UniRef50_Q9C5C0 Cluster: Mitogen-activated protein kinase 18; n=73;
Viridiplantae|Rep: Mitogen-activated protein kinase 18 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 603
Score = 35.1 bits (77), Expect = 2.0
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Frame = -3
Query: 433 TDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYA-AVLKRKAILELRR 257
TDL KS+ I V ++ + RK NP+T ++ K +P A +L+R + +
Sbjct: 232 TDLLGTPKSETISGVRNDKARKYLTEMRKKNPVTFSQKFSKADPLALRLLQRLLAFDPKD 291
Query: 256 RKN-LKALADAEKSGLKLSKRNPA----MKAEKLRERRR 155
R +ALAD GL +R P+ K E ERRR
Sbjct: 292 RPTPAEALADPYFKGLSKIEREPSSQQISKMEFEFERRR 330
>UniRef50_O60293 Cluster: Coiled-coil domain-containing protein 131;
n=26; Amniota|Rep: Coiled-coil domain-containing protein
131 - Homo sapiens (Human)
Length = 1989
Score = 35.1 bits (77), Expect = 2.0
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = -3
Query: 511 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP-NKRV-IRATRKLNP 338
DPL P ++K + L + ++AN + RL+KSD+++ +P N V I ++
Sbjct: 762 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEIDGIGRIAM 821
Query: 337 LTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRER 161
+T ++ + LK+ IL ++ LK L E + K S RN K KL E+
Sbjct: 822 VTK-----QVTDAESKLKKHRILLMKDESVLKNLVQQE-AKKKESVRNAEAKITKLTEQ 874
>UniRef50_UPI000150A5BE Cluster: hypothetical protein
TTHERM_00069200; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00069200 - Tetrahymena
thermophila SB210
Length = 560
Score = 34.7 bits (76), Expect = 2.6
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Frame = -3
Query: 481 SKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP----NKRVIRATRKLNPLTNNKAML 314
++ KK L + K + + ++I K++ P NK + +N L+ N
Sbjct: 49 TQNKKKIQLMEDKYTEIERENRILLEKITKIMNPPKTTSNKNQYQDQSVMNRLSRNNNYS 108
Query: 313 KLNPYAAVLKRKAILELRRRKNLKALADAEKSGL-KLSKRNPAMKAEKLRERRRKN 149
+ ++ K+K++ +L RRK L ++ + K L ++ R K E +KN
Sbjct: 109 TIQQ-SSYTKKKSLNQLNRRKELLSIMEENKKILERIKSRKSEYDHRKWEEDHKKN 163
>UniRef50_Q54WV7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 987
Score = 34.7 bits (76), Expect = 2.6
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -3
Query: 289 LKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERR 158
+K K+ ++ ++K KALA E+ +KL KAEKL ERR
Sbjct: 410 IKSKSFRKVEKKKKEKALAKREEELMKLDPEFAKHKAEKLEERR 453
>UniRef50_Q6NE17 Cluster: Putative erythrocyte-binding protein
MAEBL; n=1; Leptospira phage LE1|Rep: Putative
erythrocyte-binding protein MAEBL - Leptospira phage LE1
Length = 859
Score = 34.3 bits (75), Expect = 3.5
Identities = 22/84 (26%), Positives = 43/84 (51%)
Frame = -3
Query: 472 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAA 293
KKN +LP+ + +L++++ + + +K I + RK L+ ++ ++ A
Sbjct: 304 KKNSSLPKSQTETKELSKVVNEQDPIETKITQSKNKIDSIRKDKSLSEDEFRTEIEKARA 363
Query: 292 VLKRKAILELRRRKNLKALADAEK 221
L R A+ E + R K+L+D EK
Sbjct: 364 EL-RSAMKEKQARDGFKSLSDLEK 386
>UniRef50_Q23DJ6 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1067
Score = 33.1 bits (72), Expect = 8.0
Identities = 22/96 (22%), Positives = 42/96 (43%)
Frame = -3
Query: 532 QSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRAT 353
+S F L + + NLP + + L+ + ++L ++R T
Sbjct: 552 ESQFDNNLSLIDDIENEQSMSNSSNLPLVSNQASAINIKLQEKDFYELLNLESERAAITT 611
Query: 352 RKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNL 245
+K+N + NNK +LK V + ++ L++ KNL
Sbjct: 612 KKINRIHNNKMVLKSAFEVNVQQSDEVILLKQEKNL 647
>UniRef50_A2G612 Cluster: SNF7 family protein; n=2; Trichomonas
vaginalis G3|Rep: SNF7 family protein - Trichomonas
vaginalis G3
Length = 199
Score = 33.1 bits (72), Expect = 8.0
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = -3
Query: 409 SDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALAD 230
SD++ + + +K + RKL+ LT M L+RKA L+RRK L+
Sbjct: 23 SDQLGRKSESIDKEIAEINRKLSELTKQMKMPSNKSRVPTLRRKATELLKRRKMLEGF-Q 81
Query: 229 AEKSGLKLSKRNPAMKAEKLR 167
+ G + + N A + ++++
Sbjct: 82 GKIDGQRFNIDNMAFQQQQMK 102
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 33.1 bits (72), Expect = 8.0
Identities = 22/87 (25%), Positives = 39/87 (44%)
Frame = -3
Query: 772 LKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXX 593
L ++D+ ++ + ++ R GK +R R + K L + D + RA PGV
Sbjct: 169 LGLFADVNRL-EGRKPRTGKSALRGRPKKIGKSILFVVGADGPVIRAVGGFPGVTARPAR 227
Query: 592 XXXXXXLAPGGHLGRFVIWTQSAFGRL 512
LAPG R +++++A L
Sbjct: 228 DLSVLDLAPGAEPARLTVYSKAAIESL 254
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,244,615
Number of Sequences: 1657284
Number of extensions: 12725182
Number of successful extensions: 34892
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 33247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34819
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65850543200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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