Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13b07
(780 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 223 6e-58
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 223 6e-58
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 223 6e-58
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 223 6e-58
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 223 6e-58
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 223 6e-58
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 223 6e-58
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 223 6e-58
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 223 6e-58
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 223 6e-58
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 223 6e-58
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 221 2e-57
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 219 1e-56
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 217 5e-56
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 35 0.29
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 35 0.29
X61923-1|CAA43925.1| 266|Homo sapiens ribosomal protein L7a pro... 30 8.1
X52138-1|CAA36383.1| 266|Homo sapiens L7a protein protein. 30 8.1
X06705-1|CAA29889.1| 266|Homo sapiens protein ( Human PLA-X mRN... 30 8.1
M36072-1|AAA60282.1| 266|Homo sapiens RPL7A protein. 30 8.1
CT841517-1|CAJ86447.1| 2151|Homo sapiens dJ694E4.2 protein. 30 8.1
BC105290-1|AAI05291.1| 266|Homo sapiens ribosomal protein L7a p... 30 8.1
BC073802-1|AAH73802.1| 266|Homo sapiens ribosomal protein L7a p... 30 8.1
BC071901-1|AAH71901.1| 266|Homo sapiens ribosomal protein L7a p... 30 8.1
BC071900-1|AAH71900.1| 266|Homo sapiens ribosomal protein L7a p... 30 8.1
BC023624-1|AAH23624.1| 266|Homo sapiens ribosomal protein L7a p... 30 8.1
BC023594-1|AAH23594.1| 266|Homo sapiens ribosomal protein L7a p... 30 8.1
BC021979-1|AAH21979.1| 266|Homo sapiens ribosomal protein L7a p... 30 8.1
BC005128-1|AAH05128.1| 266|Homo sapiens ribosomal protein L7a p... 30 8.1
AL158826-9|CAI12833.1| 191|Homo sapiens ribosomal protein L7a p... 30 8.1
AL158826-8|CAI12832.1| 266|Homo sapiens ribosomal protein L7a p... 30 8.1
AL031255-4|CAI22448.1| 2151|Homo sapiens chromosome 22 open read... 30 8.1
AK130944-1|BAC85470.1| 609|Homo sapiens protein ( Homo sapiens ... 30 8.1
AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast can... 30 8.1
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 223 bits (545), Expect = 6e-58
Identities = 108/203 (53%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 172 KKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLN 231
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTR 419
LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R
Sbjct: 232 VSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSR 291
Query: 418 LLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA 239
+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 292 ILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRV 351
Query: 238 -LADAEKSGLKLSKRNPAMKAEK 173
A A + L+ A A K
Sbjct: 352 DKAAAAAAALQAKSDEKAAVAGK 374
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 223 bits (545), Expect = 6e-58
Identities = 108/203 (53%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 172 KKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLN 231
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTR 419
LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R
Sbjct: 232 VSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSR 291
Query: 418 LLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA 239
+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 292 ILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRV 351
Query: 238 -LADAEKSGLKLSKRNPAMKAEK 173
A A + L+ A A K
Sbjct: 352 DKAAAAAAALQAKSDEKAAVAGK 374
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 223 bits (545), Expect = 6e-58
Identities = 108/203 (53%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 172 KKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLN 231
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTR 419
LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R
Sbjct: 232 VSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSR 291
Query: 418 LLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA 239
+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 292 ILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRV 351
Query: 238 -LADAEKSGLKLSKRNPAMKAEK 173
A A + L+ A A K
Sbjct: 352 DKAAAAAAALQAKSDEKAAVAGK 374
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 223 bits (545), Expect = 6e-58
Identities = 108/203 (53%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 172 KKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLN 231
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTR 419
LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R
Sbjct: 232 VSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSR 291
Query: 418 LLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA 239
+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 292 ILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRV 351
Query: 238 -LADAEKSGLKLSKRNPAMKAEK 173
A A + L+ A A K
Sbjct: 352 DKAAAAAAALQAKSDEKAAVAGK 374
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 223 bits (545), Expect = 6e-58
Identities = 108/203 (53%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 172 KKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLN 231
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTR 419
LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R
Sbjct: 232 VSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSR 291
Query: 418 LLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA 239
+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 292 ILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRV 351
Query: 238 -LADAEKSGLKLSKRNPAMKAEK 173
A A + L+ A A K
Sbjct: 352 DKAAAAAAALQAKSDEKAAVAGK 374
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 223 bits (545), Expect = 6e-58
Identities = 108/203 (53%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 172 KKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLN 231
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTR 419
LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R
Sbjct: 232 VSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSR 291
Query: 418 LLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA 239
+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 292 ILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRV 351
Query: 238 -LADAEKSGLKLSKRNPAMKAEK 173
A A + L+ A A K
Sbjct: 352 DKAAAAAAALQAKSDEKAAVAGK 374
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 223 bits (545), Expect = 6e-58
Identities = 108/203 (53%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 172 KKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLN 231
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTR 419
LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R
Sbjct: 232 VSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSR 291
Query: 418 LLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA 239
+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 292 ILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRV 351
Query: 238 -LADAEKSGLKLSKRNPAMKAEK 173
A A + L+ A A K
Sbjct: 352 DKAAAAAAALQAKSDEKAAVAGK 374
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 223 bits (545), Expect = 6e-58
Identities = 108/203 (53%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 172 KKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLN 231
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTR 419
LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R
Sbjct: 232 VSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSR 291
Query: 418 LLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA 239
+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 292 ILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRV 351
Query: 238 -LADAEKSGLKLSKRNPAMKAEK 173
A A + L+ A A K
Sbjct: 352 DKAAAAAAALQAKSDEKAAVAGK 374
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 223 bits (545), Expect = 6e-58
Identities = 108/203 (53%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 172 KKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLN 231
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTR 419
LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R
Sbjct: 232 VSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSR 291
Query: 418 LLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA 239
+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 292 ILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRV 351
Query: 238 -LADAEKSGLKLSKRNPAMKAEK 173
A A + L+ A A K
Sbjct: 352 DKAAAAAAALQAKSDEKAAVAGK 374
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 223 bits (545), Expect = 6e-58
Identities = 108/203 (53%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 172 KKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLN 231
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTR 419
LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R
Sbjct: 232 VSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSR 291
Query: 418 LLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA 239
+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 292 ILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRV 351
Query: 238 -LADAEKSGLKLSKRNPAMKAEK 173
A A + L+ A A K
Sbjct: 352 DKAAAAAAALQAKSDEKAAVAGK 374
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 223 bits (545), Expect = 6e-58
Identities = 108/203 (53%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 172 KKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLN 231
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTR 419
LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R
Sbjct: 232 VSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSR 291
Query: 418 LLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA 239
+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 292 ILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRV 351
Query: 238 -LADAEKSGLKLSKRNPAMKAEK 173
A A + L+ A A K
Sbjct: 352 DKAAAAAAALQAKSDEKAAVAGK 374
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 221 bits (541), Expect = 2e-57
Identities = 108/203 (53%), Positives = 138/203 (67%), Gaps = 1/203 (0%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 186 KKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLN 245
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTR 419
LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R
Sbjct: 246 VSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSR 305
Query: 418 LLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA 239
+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 306 ILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILCQARNHKLRV 365
Query: 238 -LADAEKSGLKLSKRNPAMKAEK 173
A A + L+ A A K
Sbjct: 366 DKAAAAAAALQAKSDEKAAVAGK 388
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 219 bits (534), Expect = 1e-56
Identities = 100/179 (55%), Positives = 129/179 (72%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 172 KKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLN 231
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTR 419
LAPGGH+GRF IW +SAF +LD L+G+W+ + K N+NLP +M NTDL+R
Sbjct: 232 VSKLNILKLAPGGHVGRFCIWIESAFRKLDELYGTWRKAASLKSNYNLPMHEMINTDLSR 291
Query: 418 LLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 242
+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 292 ILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 217 bits (529), Expect = 5e-56
Identities = 107/203 (52%), Positives = 137/203 (67%), Gaps = 1/203 (0%)
Frame = -3
Query: 778 RRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXX 599
++LKAW+DI KVY SQR+RAGKGKMRNRR IQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 172 KKLKAWNDIKKVYASQRMRAGKGKMRNRR-IQRRGPCIIYNEDNGIIKAFRNIPGITLLN 230
Query: 598 XXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTR 419
LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R
Sbjct: 231 VSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSR 290
Query: 418 LLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA 239
+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 291 ILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRV 350
Query: 238 -LADAEKSGLKLSKRNPAMKAEK 173
A A + L+ A A K
Sbjct: 351 DKAAAAAAALQAKSDEKAAVAGK 373
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 35.1 bits (77), Expect = 0.29
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = -3
Query: 511 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP-NKRV-IRATRKLNP 338
DPL P ++K + L + ++AN + RL+KSD+++ +P N V I ++
Sbjct: 26 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEIDGIGRIAM 85
Query: 337 LTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRER 161
+T ++ + LK+ IL ++ LK L E + K S RN K KL E+
Sbjct: 86 VTK-----QVTDAESKLKKHRILLMKDESVLKNLVQQE-AKKKESVRNAEAKITKLTEQ 138
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 35.1 bits (77), Expect = 0.29
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = -3
Query: 511 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP-NKRV-IRATRKLNP 338
DPL P ++K + L + ++AN + RL+KSD+++ +P N V I ++
Sbjct: 771 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEIDGIGRIAM 830
Query: 337 LTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRER 161
+T ++ + LK+ IL ++ LK L E + K S RN K KL E+
Sbjct: 831 VTK-----QVTDAESKLKKHRILLMKDESVLKNLVQQE-AKKKESVRNAEAKITKLTEQ 883
>X61923-1|CAA43925.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 30.3 bits (65), Expect = 8.1
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = -3
Query: 544 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 365
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 364 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 209
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 208 LSKRNPAMKA 179
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>X52138-1|CAA36383.1| 266|Homo sapiens L7a protein protein.
Length = 266
Score = 30.3 bits (65), Expect = 8.1
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = -3
Query: 544 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 365
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 364 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 209
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 208 LSKRNPAMKA 179
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>X06705-1|CAA29889.1| 266|Homo sapiens protein ( Human PLA-X mRNA.
).
Length = 266
Score = 30.3 bits (65), Expect = 8.1
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = -3
Query: 544 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 365
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 364 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 209
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 208 LSKRNPAMKA 179
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>M36072-1|AAA60282.1| 266|Homo sapiens RPL7A protein.
Length = 266
Score = 30.3 bits (65), Expect = 8.1
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = -3
Query: 544 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 365
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 364 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 209
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 208 LSKRNPAMKA 179
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>CT841517-1|CAJ86447.1| 2151|Homo sapiens dJ694E4.2 protein.
Length = 2151
Score = 30.3 bits (65), Expect = 8.1
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = -3
Query: 364 IRATRKLNPLTN-NKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPA 188
+ A +L P T K+++ P + L RK K A K + SK PA
Sbjct: 1570 LSAPTRLEPETAPTKSLVSHIPKQMSTPCHPLRSLNFRKTTKESALLNKLSILASKLAPA 1629
Query: 187 MKAEKLRERR 158
MK +KLR RR
Sbjct: 1630 MKTQKLRYRR 1639
>BC105290-1|AAI05291.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 30.3 bits (65), Expect = 8.1
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = -3
Query: 544 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 365
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 364 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 209
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 208 LSKRNPAMKA 179
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>BC073802-1|AAH73802.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 30.3 bits (65), Expect = 8.1
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = -3
Query: 544 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 365
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 364 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 209
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 208 LSKRNPAMKA 179
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>BC071901-1|AAH71901.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 30.3 bits (65), Expect = 8.1
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = -3
Query: 544 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 365
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 364 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 209
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 208 LSKRNPAMKA 179
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>BC071900-1|AAH71900.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 30.3 bits (65), Expect = 8.1
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = -3
Query: 544 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 365
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 364 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 209
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 208 LSKRNPAMKA 179
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>BC023624-1|AAH23624.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 30.3 bits (65), Expect = 8.1
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = -3
Query: 544 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 365
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 364 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 209
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 208 LSKRNPAMKA 179
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>BC023594-1|AAH23594.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 30.3 bits (65), Expect = 8.1
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = -3
Query: 544 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 365
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 364 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 209
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 208 LSKRNPAMKA 179
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>BC021979-1|AAH21979.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 30.3 bits (65), Expect = 8.1
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = -3
Query: 544 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 365
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 364 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 209
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 208 LSKRNPAMKA 179
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>BC005128-1|AAH05128.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 30.3 bits (65), Expect = 8.1
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = -3
Query: 544 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 365
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 364 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 209
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 208 LSKRNPAMKA 179
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>AL158826-9|CAI12833.1| 191|Homo sapiens ribosomal protein L7a
protein.
Length = 191
Score = 30.3 bits (65), Expect = 8.1
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = -3
Query: 544 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 365
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 45 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 95
Query: 364 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 209
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 96 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 155
Query: 208 LSKRNPAMKA 179
+KR P ++A
Sbjct: 156 PTKRPPVLRA 165
>AL158826-8|CAI12832.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 30.3 bits (65), Expect = 8.1
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = -3
Query: 544 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 365
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 364 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 209
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 208 LSKRNPAMKA 179
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>AL031255-4|CAI22448.1| 2151|Homo sapiens chromosome 22 open reading
frame 30 protein.
Length = 2151
Score = 30.3 bits (65), Expect = 8.1
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = -3
Query: 364 IRATRKLNPLTN-NKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPA 188
+ A +L P T K+++ P + L RK K A K + SK PA
Sbjct: 1570 LSAPTRLEPETAPTKSLVSHIPKQMSTPCHPLRSLNFRKTTKESALLNKLSILASKLAPA 1629
Query: 187 MKAEKLRERR 158
MK +KLR RR
Sbjct: 1630 MKTQKLRYRR 1639
>AK130944-1|BAC85470.1| 609|Homo sapiens protein ( Homo sapiens
cDNA FLJ27434 fis, clone WMD09549. ).
Length = 609
Score = 30.3 bits (65), Expect = 8.1
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = -3
Query: 364 IRATRKLNPLTN-NKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPA 188
+ A +L P T K+++ P + L RK K A K + SK PA
Sbjct: 173 LSAPTRLEPETAPTKSLVSHIPKQMSTPCHPLRSLNFRKTTKESALLNKLSILASKLAPA 232
Query: 187 MKAEKLRERR 158
MK +KLR RR
Sbjct: 233 MKTQKLRYRR 242
>AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast cancer
1 protein.
Length = 1013
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -1
Query: 534 LSPHSAGLTPYSGHGRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRSG 394
+ PH A L G G + K ++T P QR P L +F ++M +G
Sbjct: 560 IQPHGAKLLEELGTGLIQQYKPDSTTAPDQRAPVLLVVMFWTMMLNG 606
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,315,636
Number of Sequences: 237096
Number of extensions: 2028228
Number of successful extensions: 4405
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 4043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4399
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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