Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13b02
(760 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q06694 Cluster: Uncharacterized 26.9 kDa protein in GP4... 356 4e-97
UniRef50_O10334 Cluster: Uncharacterized 24.9 kDa protein; n=9; ... 229 6e-59
UniRef50_Q80LN2 Cluster: Putative uncharacterized protein; n=1; ... 194 3e-48
UniRef50_Q0IL27 Cluster: ORF92; n=4; root|Rep: ORF92 - Leucania ... 193 3e-48
UniRef50_Q461Z2 Cluster: Orf74; n=3; Nucleopolyhedrovirus|Rep: O... 185 1e-45
UniRef50_Q0N427 Cluster: Ac81-like protein; n=4; Nucleopolyhedro... 166 5e-40
UniRef50_Q6QXL4 Cluster: ORF94; n=9; Granulovirus|Rep: ORF94 - A... 163 3e-39
UniRef50_Q8QLD1 Cluster: Putative uncharacterized protein; n=1; ... 124 2e-27
UniRef50_Q06691 Cluster: Telokin-like protein 20; n=6; Nucleopol... 90 6e-17
UniRef50_Q6JKB2 Cluster: Putative uncharacterized protein; n=3; ... 86 8e-16
UniRef50_Q66GN2 Cluster: At5g01560; n=5; Arabidopsis thaliana|Re... 34 4.4
UniRef50_Q9NVH0 Cluster: Exonuclease 3'-5' domain-like-containin... 34 4.4
>UniRef50_Q06694 Cluster: Uncharacterized 26.9 kDa protein in
GP41-PNK intergenic region; n=11;
Nucleopolyhedrovirus|Rep: Uncharacterized 26.9 kDa
protein in GP41-PNK intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 233
Score = 356 bits (875), Expect = 4e-97
Identities = 170/208 (81%), Positives = 177/208 (85%)
Frame = -3
Query: 638 PPLSMSKKKTPTLLESISKKISTTETFQRLRNKNLTTLNKIKYDSELLLHYLYDDQQNKN 459
PPLSMSKK+TPTLL+SISKKISTTET QRLRNKNLTTLNKIKYDSELLLHYLYDD NKN
Sbjct: 10 PPLSMSKKETPTLLDSISKKISTTETLQRLRNKNLTTLNKIKYDSELLLHYLYDDHHNKN 69
Query: 458 SDYAXXXXXXXXXXXXXXXKTGASILAHYFAQVHVSNGYSFEFHPGSQPRTFQTIHTDGL 279
SDYA KTGASILAHYFAQ+HVS GYSFEFHPGSQPRTFQTIHTDGL
Sbjct: 70 SDYANNNINVIKISKVKVKKTGASILAHYFAQIHVSTGYSFEFHPGSQPRTFQTIHTDGL 129
Query: 278 IIKVLILCDECCKKELRDYIKGENSFNVAFKNCESILCRRISFQTVLMTCAVLLLLFNVE 99
IIKVLILCDECCKKELRDYIKGENSFNVAF+NCESILCRR+SFQTVL+TCA+LLLLFNVE
Sbjct: 130 IIKVLILCDECCKKELRDYIKGENSFNVAFRNCESILCRRVSFQTVLLTCAILLLLFNVE 189
Query: 98 KFSMXXXXXXXXXXXXLFCHNNYIISNP 15
KFSM LFCHNNYIISNP
Sbjct: 190 KFSMINLLIILLILLSLFCHNNYIISNP 217
>UniRef50_O10334 Cluster: Uncharacterized 24.9 kDa protein; n=9;
Nucleopolyhedrovirus|Rep: Uncharacterized 24.9 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 218
Score = 229 bits (560), Expect = 6e-59
Identities = 113/181 (62%), Positives = 128/181 (70%)
Frame = -3
Query: 557 QRLRNKNLTTLNKIKYDSELLLHYLYDDQQNKNSDYAXXXXXXXXXXXXXXXKTGASILA 378
+R ++KN T++NKIKYDSELLL YLY+ +D KTGASILA
Sbjct: 26 RRPKSKNWTSVNKIKYDSELLLQYLYE---GFGADRPYSDINVIKVYKVKVKKTGASILA 82
Query: 377 HYFAQVHVSNGYSFEFHPGSQPRTFQTIHTDGLIIKVLILCDECCKKELRDYIKGENSFN 198
HYFA V S GY FEFHPGSQPRTFQT+HTDGLIIKV I+CD CCK ELR YI+GEN FN
Sbjct: 83 HYFAHVSTSTGYEFEFHPGSQPRTFQTVHTDGLIIKVHIMCDACCKAELRRYIEGENGFN 142
Query: 197 VAFKNCESILCRRISFQTVLMTCAVLLLLFNVEKFSMXXXXXXXXXXXXLFCHNNYIISN 18
VAF+NCESILCRR+SFQT+L+ +LLLLFNVE FS LFCHNNYIISN
Sbjct: 143 VAFRNCESILCRRVSFQTLLLGSVILLLLFNVENFSALNLLVILLILLALFCHNNYIISN 202
Query: 17 P 15
P
Sbjct: 203 P 203
>UniRef50_Q80LN2 Cluster: Putative uncharacterized protein; n=1;
Adoxophyes honmai NPV|Rep: Putative uncharacterized
protein - Adoxophyes honmai nucleopolyhedrovirus
Length = 267
Score = 194 bits (472), Expect = 3e-48
Identities = 98/218 (44%), Positives = 135/218 (61%), Gaps = 9/218 (4%)
Frame = -3
Query: 641 QPPLSMSKKKTPTLLESISKKISTT-ETFQRLRNKNLTTLNKIKYDSELLLHYLY----- 480
QP + M+ T T++ + + Q L+ KN T LN+IKYD ELL+HYL+
Sbjct: 28 QPEMEMTTTTTTTMITHPTDHTTNQFHVLQNLKLKNATILNRIKYDPELLIHYLFNNYHM 87
Query: 479 ---DDQQNKNSDYAXXXXXXXXXXXXXXXKTGASILAHYFAQVHVSNGYSFEFHPGSQPR 309
DD Q + D GA ILAHY+A +++ N YSFEFHPGSQP+
Sbjct: 88 LLDDDTQLTDHDLYNYINVIKICKVKVKKSYGA-ILAHYYAHINLFNNYSFEFHPGSQPK 146
Query: 308 TFQTIHTDGLIIKVLILCDECCKKELRDYIKGENSFNVAFKNCESILCRRISFQTVLMTC 129
TFQT+HT+G +I V++LC+ CC++ELR+++ GENSFNVAFKNCESILC+R SFQT+++
Sbjct: 147 TFQTVHTNGHVIYVMVLCNTCCEEELRNFVTGENSFNVAFKNCESILCKRKSFQTIIIAT 206
Query: 128 AVLLLLFNVEKFSMXXXXXXXXXXXXLFCHNNYIISNP 15
A+L + N+ KFS L+ +NNY+ISNP
Sbjct: 207 ALLFIFTNMIKFSWYFIFLVLFLMFLLYVNNNYMISNP 244
>UniRef50_Q0IL27 Cluster: ORF92; n=4; root|Rep: ORF92 - Leucania
separata nuclear polyhedrosis virus (LsNPV)
Length = 240
Score = 193 bits (471), Expect = 3e-48
Identities = 93/199 (46%), Positives = 131/199 (65%), Gaps = 5/199 (2%)
Frame = -3
Query: 596 ESISKKISTT-----ETFQRLRNKNLTTLNKIKYDSELLLHYLYDDQQNKNSDYAXXXXX 432
E K ++TT Q+ + N + KIKYD ++LL YL+D + + +D
Sbjct: 30 EEADKSLTTTILTLMNRLQKSESPNENAIQKIKYDPKILLSYLFDGKNDNTNDV-----N 84
Query: 431 XXXXXXXXXXKTGASILAHYFAQVHVSNGYSFEFHPGSQPRTFQTIHTDGLIIKVLILCD 252
KTG ++LAHY+A++ +S+GY+FEFHPGSQPRTFQT+HTDG+II V ILC+
Sbjct: 85 VIKVCKVRVRKTGGAMLAHYYARIKLSSGYTFEFHPGSQPRTFQTVHTDGIIILVRILCN 144
Query: 251 ECCKKELRDYIKGENSFNVAFKNCESILCRRISFQTVLMTCAVLLLLFNVEKFSMXXXXX 72
ECC+KEL+D+++GEN FN+AF+NCESILC+R S QTVL+T AV+++L NV FS
Sbjct: 145 ECCRKELKDFVEGENKFNIAFQNCESILCKRKSMQTVLITIAVIIVLINVGNFSFVHVFF 204
Query: 71 XXXXXXXLFCHNNYIISNP 15
L+ +NNY+I +P
Sbjct: 205 ILIIIVLLYINNNYMIRDP 223
>UniRef50_Q461Z2 Cluster: Orf74; n=3; Nucleopolyhedrovirus|Rep:
Orf74 - Trichoplusia ni SNPV
Length = 242
Score = 185 bits (450), Expect = 1e-45
Identities = 94/196 (47%), Positives = 128/196 (65%), Gaps = 4/196 (2%)
Frame = -3
Query: 590 ISKKISTTETFQRLRNKNLTT-LNKIKYDSELLLHYLYD---DQQNKNSDYAXXXXXXXX 423
I I+T ++ +KNLTT LN+IKYD ELL+HYL+D D +N N
Sbjct: 10 IPTAITTAAENYQINDKNLTTTLNRIKYDPELLIHYLFDGLTDSENVN---------IIK 60
Query: 422 XXXXXXXKTGASILAHYFAQVHVSNGYSFEFHPGSQPRTFQTIHTDGLIIKVLILCDECC 243
KT ++LAHY+A + +SNGYSFE HPGSQP+TFQ +H+DG +I L+LCD+CC
Sbjct: 61 VCKTRVKKTYGTMLAHYYAHIDISNGYSFELHPGSQPKTFQIVHSDGSMIMALVLCDDCC 120
Query: 242 KKELRDYIKGENSFNVAFKNCESILCRRISFQTVLMTCAVLLLLFNVEKFSMXXXXXXXX 63
K ELR +I GEN+FNVAFKNCESILC+R S QTV ++ A+++++ N+ FS
Sbjct: 121 KDELRSFIDGENNFNVAFKNCESILCKRKSMQTVFVSLALVVIVANMFTFSWYFIFLVIF 180
Query: 62 XXXXLFCHNNYIISNP 15
L+ +NNY+IS+P
Sbjct: 181 IIAILYINNNYMISDP 196
>UniRef50_Q0N427 Cluster: Ac81-like protein; n=4;
Nucleopolyhedrovirus|Rep: Ac81-like protein - Clanis
bilineata nucleopolyhedrosis virus
Length = 317
Score = 166 bits (404), Expect = 5e-40
Identities = 80/188 (42%), Positives = 118/188 (62%), Gaps = 1/188 (0%)
Frame = -3
Query: 575 STTETFQRLRNKNLTTLNKIKYDSELLLHYLYDD-QQNKNSDYAXXXXXXXXXXXXXXXK 399
S +L +KN ++K+D ELL+HYL+D+ + ++D K
Sbjct: 108 SVPTMLHQLNDKNWN--ERVKFDPELLIHYLFDNIDMHTDTDV-----NVIKVCKIRVTK 160
Query: 398 TGASILAHYFAQVHVSNGYSFEFHPGSQPRTFQTIHTDGLIIKVLILCDECCKKELRDYI 219
T ++L HY+A + ++N Y FEFHPGSQPRTFQT+HT G ++ V ++C+ECCK LR +I
Sbjct: 161 TMGTMLTHYYAHIKINNDYEFEFHPGSQPRTFQTVHTKGFVVGVYLVCNECCKNYLRTFI 220
Query: 218 KGENSFNVAFKNCESILCRRISFQTVLMTCAVLLLLFNVEKFSMXXXXXXXXXXXXLFCH 39
+GEN+FNV FKNCE+ILC+R SFQT+ ++ A+L + N+ +FS L+ +
Sbjct: 221 EGENNFNVIFKNCETILCQRHSFQTIFVSLALLCVFVNMIEFSWFFIFLVTCIVILLYMN 280
Query: 38 NNYIISNP 15
NNY+ISNP
Sbjct: 281 NNYLISNP 288
>UniRef50_Q6QXL4 Cluster: ORF94; n=9; Granulovirus|Rep: ORF94 -
Agrotis segetum granulosis virus (AsGV) (Agrotis
segetumgranulovirus)
Length = 197
Score = 163 bits (397), Expect = 3e-39
Identities = 81/172 (47%), Positives = 112/172 (65%), Gaps = 2/172 (1%)
Frame = -3
Query: 524 NKIKYDSELLLHYLYDDQQNKNSDYAXXXXXXXXXXXXXXXKTGASILAHYFAQVHVSNG 345
+++K+DSE+LL Y+YD +++ KTG ++LAHY+AQV VSN
Sbjct: 9 DRVKFDSEVLLRYIYDYSLTASNE-----PNVIKICRVKVRKTGGAVLAHYYAQVFVSNK 63
Query: 344 YSFEFHPGSQPRTFQTIHTDG--LIIKVLILCDECCKKELRDYIKGENSFNVAFKNCESI 171
+SFEFHPGSQP+TFQ + T+ L + V +CDEC K+ELRDYI+GEN FN+AFKNCESI
Sbjct: 64 FSFEFHPGSQPKTFQNVDTEKEHLPVCVKFMCDECTKQELRDYIEGENQFNIAFKNCESI 123
Query: 170 LCRRISFQTVLMTCAVLLLLFNVEKFSMXXXXXXXXXXXXLFCHNNYIISNP 15
LC+R S QTV++T +++LL N+ FS L+ NNY++S P
Sbjct: 124 LCKRKSVQTVIITILIVVLLINLVNFSALNIIVIAFLLILLYIVNNYLLSKP 175
>UniRef50_Q8QLD1 Cluster: Putative uncharacterized protein; n=1;
Mamestra configurata NPV-A|Rep: Putative uncharacterized
protein - Mamestra configurata NPV-A
Length = 173
Score = 124 bits (300), Expect = 2e-27
Identities = 55/115 (47%), Positives = 76/115 (66%)
Frame = -3
Query: 554 RLRNKNLTTLNKIKYDSELLLHYLYDDQQNKNSDYAXXXXXXXXXXXXXXXKTGASILAH 375
+L +KNLT L ++KYD LL+HY++D N + T ++LAH
Sbjct: 42 QLNDKNLTNLTRVKYDENLLIHYIFDGLTNSENTNVIKVCKVRVRK------TCGTLLAH 95
Query: 374 YFAQVHVSNGYSFEFHPGSQPRTFQTIHTDGLIIKVLILCDECCKKELRDYIKGE 210
Y+AQV VSNG+SFEFHPGSQPRTFQ +HTDG I ++++CD CCK+ELR ++K +
Sbjct: 96 YYAQVDVSNGFSFEFHPGSQPRTFQNVHTDGNTIIIMMMCDNCCKEELRTFVKAK 150
Score = 37.5 bits (83), Expect = 0.36
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -1
Query: 217 KVKIRLMWPLKIAKAFCVGASVFKR 143
K K LMWPLKIA+AFC V KR
Sbjct: 148 KAKTVLMWPLKIARAFCANVKVCKR 172
>UniRef50_Q06691 Cluster: Telokin-like protein 20; n=6;
Nucleopolyhedrovirus|Rep: Telokin-like protein 20 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 180
Score = 89.8 bits (213), Expect = 6e-17
Identities = 46/81 (56%), Positives = 53/81 (65%)
Frame = -2
Query: 759 LFQTKIYRPDNNKTDAAVNTSSPKRXXXXXXXXXXXXXXXXXXXXEQKENTDAVGIDFEE 580
LFQTKI+R DN+KTDAAV+TSSPKR Q+ N D VG+DFEE
Sbjct: 101 LFQTKIWRSDNSKTDAAVHTSSPKRTVETENDDDGEAASAAAIDE-QEGNADVVGLDFEE 159
Query: 579 NIDDGDVSAPKKQKLDNAEQN 517
NIDDGD PKKQKLDNA+Q+
Sbjct: 160 NIDDGDAPTPKKQKLDNAKQD 180
>UniRef50_Q6JKB2 Cluster: Putative uncharacterized protein; n=3;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Neodiprion sertifer NPV
Length = 176
Score = 86.2 bits (204), Expect = 8e-16
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 4/98 (4%)
Frame = -3
Query: 389 SILAHYFAQVHVSNGYSFEFHPGSQPRTFQT---IHTDGLIIKVLILCDECCKKELRDYI 219
S+L+H+FA++ + NG FE HPGSQP TFQ+ + + ++ + CDEC KK L ++
Sbjct: 42 SLLSHFFAKIDI-NGQKFEIHPGSQPNTFQSYKPLASVDELVSEFVECDECMKKRLIKFV 100
Query: 218 KGENSFNVAFKNCESILCRRISFQT-VLMTCAVLLLLF 108
+ EN FN+ NCE I C++ S+Q+ + + C + LF
Sbjct: 101 EDENKFNILVNNCEKISCQQTSWQSLIFINCLCNVFLF 138
>UniRef50_Q66GN2 Cluster: At5g01560; n=5; Arabidopsis thaliana|Rep:
At5g01560 - Arabidopsis thaliana (Mouse-ear cress)
Length = 691
Score = 33.9 bits (74), Expect = 4.4
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -3
Query: 620 KKKTPTLLESISKKISTTETFQRLRNKNLTTLNK-IKYDSELLLHYLY 480
KK TP ++ + + ++ E+ RLR+KNL L K+ ++LLL Y Y
Sbjct: 392 KKITPNSMQGVREFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDY 439
>UniRef50_Q9NVH0 Cluster: Exonuclease 3'-5' domain-like-containing
protein 2; n=29; Euteleostomi|Rep: Exonuclease 3'-5'
domain-like-containing protein 2 - Homo sapiens (Human)
Length = 496
Score = 33.9 bits (74), Expect = 4.4
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = -3
Query: 314 PRTFQTIHTDGLIIKVLILCDECCKKELRDY---IKGENSFN-VAFKNCESILCRRISFQ 147
PRT I DG I+KV + C E K L+DY ++G +A + ++LC +S +
Sbjct: 24 PRTLLDILADGTILKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGLSLK 83
Query: 146 TVLMT 132
++ T
Sbjct: 84 SLAET 88
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 558,813,542
Number of Sequences: 1657284
Number of extensions: 8977300
Number of successful extensions: 22942
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 22213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22927
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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