Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13a21
(825 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 100 1e-22
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 100 1e-22
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 100 1e-22
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 100 1e-22
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 44 4e-06
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 44 8e-06
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 43 1e-05
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 43 1e-05
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 42 3e-05
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 40 1e-04
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 38 3e-04
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 36 0.002
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 27 0.93
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 27 0.93
AJ000675-1|CAA04232.1| 600|Anopheles gambiae infection responsi... 26 1.2
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 25 3.7
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 24 4.9
AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 24 6.5
AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase ... 24 6.5
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi... 23 8.6
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 99.5 bits (237), Expect = 1e-22
Identities = 43/104 (41%), Positives = 66/104 (63%)
Frame = -3
Query: 820 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGAL 641
L+ H +E++D + +DNEA+YDIC R L + P+Y +LN L+ +S +T LRF G L
Sbjct: 83 LSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQL 142
Query: 640 NVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 509
N DL + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 143 NADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 99.5 bits (237), Expect = 1e-22
Identities = 43/104 (41%), Positives = 66/104 (63%)
Frame = -3
Query: 820 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGAL 641
L+ H +E++D + +DNEA+YDIC R L + P+Y +LN L+ +S +T LRF G L
Sbjct: 83 LSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQL 142
Query: 640 NVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 509
N DL + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 143 NADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 99.5 bits (237), Expect = 1e-22
Identities = 43/104 (41%), Positives = 66/104 (63%)
Frame = -3
Query: 820 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGAL 641
L+ H +E++D + +DNEA+YDIC R L + P+Y +LN L+ +S +T LRF G L
Sbjct: 83 LSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQL 142
Query: 640 NVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 509
N DL + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 143 NADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 99.5 bits (237), Expect = 1e-22
Identities = 43/104 (41%), Positives = 66/104 (63%)
Frame = -3
Query: 820 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGAL 641
L+ H +E++D + +DNEA+YDIC R L + P+Y +LN L+ +S +T LRF G L
Sbjct: 83 LSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQL 142
Query: 640 NVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEIT 509
N DL + N+VP+PR+HF + +AP+ S + L+V E+T
Sbjct: 143 NADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 44.4 bits (100), Expect = 4e-06
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 7/178 (3%)
Frame = -1
Query: 813 PTQPLSTLTVLSWSTMKPSMTSAAVISTLSAQXTPT*IVXXXXXXXXXXXXXXSTAL*MW 634
PT +T + + +T + T+ +T SA TP+ +T +W
Sbjct: 110 PTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTPS----------QWTDPTITTTTPIW 159
Query: 633 TSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMA 454
T P+ TW P +T+ WS + T+ + P+ + THA + T W + P
Sbjct: 160 TDPT---TWS-APTTTTTWSDQPRPPTTTTTTVWTDPTATTTTHAPTTTTTWSDLPPPPP 215
Query: 453 ST----WLAVCCTVVTSYPRM*TRPS-LPSKPSVLSNSSTGVQPVSRSVS--TTSHPP 301
+T W+ T T P T S LP P + ++ P + + + TT++PP
Sbjct: 216 TTTTTVWIDPTATTTTHVPPTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPP 273
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 43.6 bits (98), Expect = 8e-06
Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 7/124 (5%)
Frame = -1
Query: 639 MWTSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPV 460
+WT P+ TW P +T+ WS T+ + P+ + THA + T W + P
Sbjct: 158 VWTDPT---TWS-APTTTTTWSDQPPPPTTTTTTVWTDPTATTTTHAPTTTTTWSDLPPP 213
Query: 459 MAST----WLAVCCTVVTSYPRM*TRPS-LPSKPSVLSNSSTGVQPVSRSVS--TTSHPP 301
+T W+ T T P T S LP P + ++ P + + + TT++PP
Sbjct: 214 PPTTTTTVWIDPTATTTTHAPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPP 273
Query: 300 WCPE 289
E
Sbjct: 274 TTSE 277
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 43.2 bits (97), Expect = 1e-05
Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 13/186 (6%)
Frame = -1
Query: 819 SPPTQPLSTLTVLSWSTMKPSMTSAAVISTLSAQXTPT*------IVXXXXXXXXXXXXX 658
SP Q +TL + +T++P+ T+ I+T + + T T
Sbjct: 92 SPGDQTTTTLRPAT-TTLRPTTTTTDWITTTTTEATTTTRFPTTTTTSAPTTPSQWTDPT 150
Query: 657 XSTAL*MWTSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW 478
+T +WT P+ TW P +T+ WS T+ + P+ + T AS+ T W
Sbjct: 151 ITTTTPVWTDPT---TWS-APTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPASTTTTTW 206
Query: 477 *NATPVMAST----WLAVCCTVVTSYPRM*TRPS-LPSKPSVLSNSSTGVQPVSRSVS-- 319
+ P +T W+ T T P T S LP P + ++ P + + +
Sbjct: 207 SDLPPPPPTTTTTVWIDPTATTTTHVPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDY 266
Query: 318 TTSHPP 301
TT++PP
Sbjct: 267 TTAYPP 272
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 42.7 bits (96), Expect = 1e-05
Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 13/186 (6%)
Frame = -1
Query: 819 SPPTQPLSTLTVLSWSTMKPSMTSAAVISTLSAQXTPT*------IVXXXXXXXXXXXXX 658
SP Q +TL + +T++P+ T+ I+T + + T T
Sbjct: 92 SPGDQTTTTLRPAT-TTLRPTTTTTDWITTTTTEATTTTRFPTTTTTSAPTTPSQWTDPT 150
Query: 657 XSTAL*MWTSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW 478
+T +WT P+ TW P +T+ WS T+ + P+ + T AS+ T W
Sbjct: 151 ITTTTPVWTDPT---TWS-APTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPASTTTTTW 206
Query: 477 *NATPVMAST----WLAVCCTVVTSYPRM*TRPS-LPSKPSVLSNSSTGVQPVSRSVS-- 319
+ P +T W+ T T P T S LP P + ++ P + + +
Sbjct: 207 SDLPPPPPTTTTTVWIDPTATTTTHAPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDY 266
Query: 318 TTSHPP 301
TT++PP
Sbjct: 267 TTAYPP 272
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 41.5 bits (93), Expect = 3e-05
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 7/178 (3%)
Frame = -1
Query: 813 PTQPLSTLTVLSWSTMKPSMTSAAVISTLSAQXTPT*IVXXXXXXXXXXXXXXSTAL*MW 634
PT +T + + +T + T+ +T SA TP+ +T +W
Sbjct: 110 PTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTPS----------QWTDPTITTTTPIW 159
Query: 633 TSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMA 454
T P+ TW P +T+ WS + T+ + + + THA + T W + P
Sbjct: 160 TDPT---TWS-APTTTTTWSDQPRPPTTTTTTVWTDSTATTTTHAPTTTTTWSDLPPPPP 215
Query: 453 ST----WLAVCCTVVTSYPRM*TRPS-LPSKPSVLSNSSTGVQPVSRSVS--TTSHPP 301
+T W+ T T P T S LP P + ++ P + + + TT++PP
Sbjct: 216 TTTTTVWIDPTATTTTHVPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPP 273
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 39.5 bits (88), Expect = 1e-04
Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 7/178 (3%)
Frame = -1
Query: 813 PTQPLSTLTVLSWSTMKPSMTSAAVISTLSAQXTPT*IVXXXXXXXXXXXXXXSTAL*MW 634
PT +T + + +T + T+ +T SA TP+ +T +W
Sbjct: 110 PTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTPS----------QWTDPTITTTTPIW 159
Query: 633 TSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMA 454
T P+ TW P +T+ WS T+ + P+ + T A + T W + P
Sbjct: 160 TDPT---TWS-APTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPTTTTTWSDLPPPPP 215
Query: 453 ST----WLAVCCTVVTSYPRM*TRPS-LPSKPSVLSNSSTGVQPVSRSVS--TTSHPP 301
+T W+ T T P T S LP P + ++ P + + + TT++PP
Sbjct: 216 TTTTTVWIDPTATTTTHAPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPP 273
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 38.3 bits (85), Expect = 3e-04
Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 7/178 (3%)
Frame = -1
Query: 813 PTQPLSTLTVLSWSTMKPSMTSAAVISTLSAQXTPT*IVXXXXXXXXXXXXXXSTAL*MW 634
PT +T + + +T + T+ +T SA TP+ +T +W
Sbjct: 110 PTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTPS----------QWTDPTITTTTPIW 159
Query: 633 TSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMA 454
T P+ TW P +T+ WS T+ + + + T AS+ T W + P
Sbjct: 160 TDPT---TWS-APTTTTTWSDQPPPPTTTTTTVWTDSTATTTTPASTTTTTWSDLPPPPP 215
Query: 453 ST----WLAVCCTVVTSYPRM*TRPS-LPSKPSVLSNSSTGVQPVSRSVS--TTSHPP 301
+T W+ T T P T S LP P + ++ P + + + TT++PP
Sbjct: 216 TTTTTVWIDPTATTTTHAPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPP 273
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 35.9 bits (79), Expect = 0.002
Identities = 41/178 (23%), Positives = 69/178 (38%), Gaps = 7/178 (3%)
Frame = -1
Query: 813 PTQPLSTLTVLSWSTMKPSMTSAAVISTLSAQXTPT*IVXXXXXXXXXXXXXXSTAL*MW 634
PT +T + + +T + T+ +T SA TP+ +T +W
Sbjct: 110 PTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTPS----------QWTDPTITTTTPIW 159
Query: 633 TSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMA 454
T P+ TW P +T+ WS T+ + P+ + T A + T W + P
Sbjct: 160 TDPT---TWS-APTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPTTTTTWSDLPPPPP 215
Query: 453 ST----WLAVCCTVVTSYPRM*TRPS-LPSKPSVLSNSSTGVQPVSRSVS--TTSHPP 301
+T W+ T T P T S P P + ++ P + + TT++PP
Sbjct: 216 TTTTTVWIDPTATTTTHAPTTTTTWSDQPPPPPTTTTTTVWTDPTTTITTDYTTAYPP 273
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 26.6 bits (56), Expect = 0.93
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -1
Query: 558 SLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTS 415
+L R + S PSP H+S PT T MA+ CT TS
Sbjct: 2 ALEDRCSPQSAPSPPHHHHSSQSPTS--TTTVTMATASPVPACTTTTS 47
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 26.6 bits (56), Expect = 0.93
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -1
Query: 558 SLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVVTS 415
+L R + S PSP H+S PT T MA+ CT TS
Sbjct: 2 ALEDRCSPQSAPSPPHHHHSSQSPTS--TTTVTMATASPVPACTTTTS 47
>AJ000675-1|CAA04232.1| 600|Anopheles gambiae infection responsive
serine proteaselike protein protein.
Length = 600
Score = 26.2 bits (55), Expect = 1.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1
Query: 225 LGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPV 118
L + TTS+TS T + + T T+ ++P PV
Sbjct: 138 LSMGATTSTTSTTATTTTTTTTTTTTTTTTTTPNPV 173
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 24.6 bits (51), Expect = 3.7
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1
Query: 552 PRRPTMNSFPSPRSQTHASSPP 487
P++P+ + P+P+ QT PP
Sbjct: 385 PQQPSRPTIPAPQQQTPPRQPP 406
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 24.2 bits (50), Expect = 4.9
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 100 RGQPGPHGLRRTLPPPYP 153
RG+PGP G L PP P
Sbjct: 627 RGEPGPKGEPGLLGPPGP 644
>AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein
protein.
Length = 338
Score = 23.8 bits (49), Expect = 6.5
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -1
Query: 144 RRESSPKPVRTWLPSRRITKKSAWTPLKARV 52
R S K V+ W +RR+ +K P A +
Sbjct: 232 RLRLSEKQVKIWFQNRRVKRKKGDAPFGAEL 262
>AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase
protein.
Length = 849
Score = 23.8 bits (49), Expect = 6.5
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +2
Query: 398 VHILGYDVTTVQHTASHV 451
+H + Y ++TV HTAS++
Sbjct: 733 IHTIEYVLSTVSHTASYL 750
>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
protein I protein.
Length = 1340
Score = 23.4 bits (48), Expect = 8.6
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -3
Query: 304 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV 170
T + D+AKV+ AV + + ++ A +++ +DL A A +
Sbjct: 991 TALLENDIAKVKHAVVIQNGMNYLSNQLAFINNPYDLSIATYAMM 1035
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 908,896
Number of Sequences: 2352
Number of extensions: 21873
Number of successful extensions: 107
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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