Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13a15
(201 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 28 2.1
BT024197-1|ABC86259.1| 485|Drosophila melanogaster RE69372p pro... 27 3.6
BT022120-1|AAY51515.1| 238|Drosophila melanogaster IP09168p pro... 27 3.6
AE014297-1535|AAF54826.1| 485|Drosophila melanogaster CG5333-PA... 27 3.6
DQ352451-1|ABD22987.1| 3790|Drosophila melanogaster Nipped-A pro... 27 4.8
BT012456-1|AAS93727.1| 271|Drosophila melanogaster RE60886p pro... 27 4.8
AY142217-1|AAN52145.1| 3803|Drosophila melanogaster transformati... 27 4.8
AY061094-1|AAL28642.1| 253|Drosophila melanogaster LD08427p pro... 27 4.8
AF112976-1|AAD28428.1| 271|Drosophila melanogaster CRK protein ... 27 4.8
AE014135-42|AAN06520.1| 253|Drosophila melanogaster CG1587-PB, ... 27 4.8
AE014135-41|AAN06519.1| 271|Drosophila melanogaster CG1587-PC, ... 27 4.8
AE014135-40|AAF59362.1| 271|Drosophila melanogaster CG1587-PA, ... 27 4.8
AE013599-60|AAF57342.2| 3805|Drosophila melanogaster CG33554-PA,... 27 4.8
AE013599-59|ABI31023.1| 3628|Drosophila melanogaster CG33554-PC,... 27 4.8
AE013599-58|ABI31022.1| 3400|Drosophila melanogaster CG33554-PB,... 27 4.8
BT001489-1|AAN71244.1| 634|Drosophila melanogaster LD25644p pro... 26 8.3
AE014134-3329|AAG22449.2| 634|Drosophila melanogaster CG9264-PB... 26 8.3
AE014134-3328|AAF53954.1| 664|Drosophila melanogaster CG9264-PA... 26 8.3
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 27.9 bits (59), Expect = 2.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 89 SSVKKTNSKHKKFVYWPKDTNAL 157
+ + +T SK K+F YWP+ T +
Sbjct: 668 TGISRTQSKIKRFYYWPQMTKTI 690
>BT024197-1|ABC86259.1| 485|Drosophila melanogaster RE69372p
protein.
Length = 485
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 195 SLISLLSLHTNGTNALVSLGQ*TNFLCLELVFFTLDIM 82
+LI L NG NA + G F CL+ + T D+M
Sbjct: 437 TLIPKLRFQVNGCNAPIEFGNVLVFTCLKSCWDTPDLM 474
>BT022120-1|AAY51515.1| 238|Drosophila melanogaster IP09168p
protein.
Length = 238
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 123 NLFIGLKIPTRWCRWCGERAKKSNCL 200
N FIG K+ + CR CG+R L
Sbjct: 5 NFFIGSKMEGKVCRTCGKRTNAERSL 30
>AE014297-1535|AAF54826.1| 485|Drosophila melanogaster CG5333-PA
protein.
Length = 485
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 195 SLISLLSLHTNGTNALVSLGQ*TNFLCLELVFFTLDIM 82
+LI L NG NA + G F CL+ + T D+M
Sbjct: 437 TLIPKLRFQVNGCNAPIEFGNVLVFTCLKSCWDTPDLM 474
>DQ352451-1|ABD22987.1| 3790|Drosophila melanogaster Nipped-A protein.
Length = 3790
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = -1
Query: 174 LHTNGTNALVSLGQ*TNFLCLELVFFTLDIMLLQAL*IGIRVRKPF 37
++T G N ++S +N L LEL+ +L+++ + + + +RK F
Sbjct: 2223 INTIGGNTVISQSPDSNALPLELLVLSLELIKNRIFVMSVEIRKLF 2268
>BT012456-1|AAS93727.1| 271|Drosophila melanogaster RE60886p
protein.
Length = 271
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +2
Query: 11 QQYFDLYDENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYWPKDTNALVP 163
QQY D DE+ P S +N+ S K ++K + + + VP
Sbjct: 162 QQYDDYMDEDAIDKNEPSISGSSNVFESTLKRTDLNRKLPAYARVKQSRVP 212
>AY142217-1|AAN52145.1| 3803|Drosophila melanogaster
transformation/transcription domain-associated protein
protein.
Length = 3803
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = -1
Query: 174 LHTNGTNALVSLGQ*TNFLCLELVFFTLDIMLLQAL*IGIRVRKPF 37
++T G N ++S +N L LEL+ +L+++ + + + +RK F
Sbjct: 2236 INTIGGNTVISQSPDSNALPLELLVLSLELIKNRIFVMSVEIRKLF 2281
>AY061094-1|AAL28642.1| 253|Drosophila melanogaster LD08427p
protein.
Length = 253
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +2
Query: 11 QQYFDLYDENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYWPKDTNALVP 163
QQY D DE+ P S +N+ S K ++K + + + VP
Sbjct: 144 QQYDDYMDEDAIDKNEPSISGSSNVFESTLKRTDLNRKLPAYARVKQSRVP 194
>AF112976-1|AAD28428.1| 271|Drosophila melanogaster CRK protein
protein.
Length = 271
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +2
Query: 11 QQYFDLYDENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYWPKDTNALVP 163
QQY D DE+ P S +N+ S K ++K + + + VP
Sbjct: 162 QQYDDYMDEDAIDKNEPSISGSSNVFESTLKRTDLNRKLPAYARVKQSRVP 212
>AE014135-42|AAN06520.1| 253|Drosophila melanogaster CG1587-PB,
isoform B protein.
Length = 253
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +2
Query: 11 QQYFDLYDENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYWPKDTNALVP 163
QQY D DE+ P S +N+ S K ++K + + + VP
Sbjct: 144 QQYDDYMDEDAIDKNEPSISGSSNVFESTLKRTDLNRKLPAYARVKQSRVP 194
>AE014135-41|AAN06519.1| 271|Drosophila melanogaster CG1587-PC,
isoform C protein.
Length = 271
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +2
Query: 11 QQYFDLYDENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYWPKDTNALVP 163
QQY D DE+ P S +N+ S K ++K + + + VP
Sbjct: 162 QQYDDYMDEDAIDKNEPSISGSSNVFESTLKRTDLNRKLPAYARVKQSRVP 212
>AE014135-40|AAF59362.1| 271|Drosophila melanogaster CG1587-PA,
isoform A protein.
Length = 271
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +2
Query: 11 QQYFDLYDENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYWPKDTNALVP 163
QQY D DE+ P S +N+ S K ++K + + + VP
Sbjct: 162 QQYDDYMDEDAIDKNEPSISGSSNVFESTLKRTDLNRKLPAYARVKQSRVP 212
>AE013599-60|AAF57342.2| 3805|Drosophila melanogaster CG33554-PA,
isoform A protein.
Length = 3805
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = -1
Query: 174 LHTNGTNALVSLGQ*TNFLCLELVFFTLDIMLLQAL*IGIRVRKPF 37
++T G N ++S +N L LEL+ +L+++ + + + +RK F
Sbjct: 2238 INTIGGNTVISQSPDSNALPLELLVLSLELIKNRIFVMSVEIRKLF 2283
>AE013599-59|ABI31023.1| 3628|Drosophila melanogaster CG33554-PC,
isoform C protein.
Length = 3628
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = -1
Query: 174 LHTNGTNALVSLGQ*TNFLCLELVFFTLDIMLLQAL*IGIRVRKPF 37
++T G N ++S +N L LEL+ +L+++ + + + +RK F
Sbjct: 2101 INTIGGNTVISQSPDSNALPLELLVLSLELIKNRIFVMSVEIRKLF 2146
>AE013599-58|ABI31022.1| 3400|Drosophila melanogaster CG33554-PB,
isoform B protein.
Length = 3400
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = -1
Query: 174 LHTNGTNALVSLGQ*TNFLCLELVFFTLDIMLLQAL*IGIRVRKPF 37
++T G N ++S +N L LEL+ +L+++ + + + +RK F
Sbjct: 1873 INTIGGNTVISQSPDSNALPLELLVLSLELIKNRIFVMSVEIRKLF 1918
>BT001489-1|AAN71244.1| 634|Drosophila melanogaster LD25644p
protein.
Length = 634
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 5 LAQQYFDLYDENGFRTRIPIQSACNNIISS 94
+A F++ DENGF +P SAC +++S
Sbjct: 202 VAVPLFNILDENGFHKLVP-ASACMLLLTS 230
>AE014134-3329|AAG22449.2| 634|Drosophila melanogaster CG9264-PB,
isoform B protein.
Length = 634
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 5 LAQQYFDLYDENGFRTRIPIQSACNNIISS 94
+A F++ DENGF +P SAC +++S
Sbjct: 202 VAVPLFNILDENGFHKLVP-ASACMLLLTS 230
>AE014134-3328|AAF53954.1| 664|Drosophila melanogaster CG9264-PA,
isoform A protein.
Length = 664
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 5 LAQQYFDLYDENGFRTRIPIQSACNNIISS 94
+A F++ DENGF +P SAC +++S
Sbjct: 253 VAVPLFNILDENGFHKLVP-ASACMLLLTS 281
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,992,565
Number of Sequences: 53049
Number of extensions: 138800
Number of successful extensions: 399
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 399
length of database: 24,988,368
effective HSP length: 46
effective length of database: 22,548,114
effective search space used: 450962280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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