Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13a09
(427 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B5C1E Cluster: PREDICTED: similar to CG1785-PA;... 47 1e-04
UniRef50_UPI0000DB7A12 Cluster: PREDICTED: similar to glioma tum... 45 8e-04
UniRef50_UPI0000D5570C Cluster: PREDICTED: similar to glioma tum... 42 0.005
UniRef50_Q9W3C2 Cluster: Uncharacterized protein CG1785; n=2; So... 39 0.050
UniRef50_A7S812 Cluster: Predicted protein; n=1; Nematostella ve... 36 0.26
UniRef50_Q6CHT5 Cluster: Similar to sp|Q12080 Saccharomyces cere... 34 1.4
UniRef50_Q4RYV2 Cluster: Chromosome 16 SCAF14974, whole genome s... 33 2.5
UniRef50_A3B798 Cluster: Putative uncharacterized protein; n=2; ... 32 5.7
UniRef50_Q9NZM5 Cluster: Glioma tumor suppressor candidate regio... 32 5.7
UniRef50_Q1Q576 Cluster: Putative uncharacterized protein; n=1; ... 31 7.5
UniRef50_Q23QB1 Cluster: Putative uncharacterized protein; n=1; ... 31 9.9
>UniRef50_UPI00015B5C1E Cluster: PREDICTED: similar to CG1785-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG1785-PA - Nasonia vitripennis
Length = 453
Score = 47.2 bits (107), Expect = 1e-04
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = -1
Query: 187 SGDLRRVAPAVNLLRERFESLQHRGALAASRVMMKK-KRKLKSYFKPGHQ 41
+G+LR PA NLL++R++SLQ R +A + +KK K K+K Y K H+
Sbjct: 395 AGNLRNTTPAGNLLKDRYKSLQQRSIVAPGALQLKKTKSKVKRYIKADHK 444
>UniRef50_UPI0000DB7A12 Cluster: PREDICTED: similar to glioma tumor
suppressor candidate region gene 2; n=1; Apis
mellifera|Rep: PREDICTED: similar to glioma tumor
suppressor candidate region gene 2 - Apis mellifera
Length = 516
Score = 44.8 bits (101), Expect = 8e-04
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = -1
Query: 187 SGDLRRVAPAVNLLRERFESLQHRGALAASRVMMKK-KRKLKSYFKPGHQ 41
+G+LR P NLL++RF+SLQ R +A + + +K+ K K+K + K H+
Sbjct: 353 TGNLRNSEPTGNLLKDRFKSLQQRNIIAPTNIKLKRDKAKIKRFIKSDHK 402
>UniRef50_UPI0000D5570C Cluster: PREDICTED: similar to glioma tumor
suppressor candidate region gene 2; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to glioma tumor
suppressor candidate region gene 2 - Tribolium castaneum
Length = 401
Score = 41.9 bits (94), Expect = 0.005
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = -1
Query: 187 SGDLRRVAPAVNLLRERFESLQHRGALAASRVMMKKKRKLKSYFKPGHQ 41
+G+LR + NLL +RF+SLQ R + S +KK K+K Y KP H+
Sbjct: 340 AGNLRNMKKEGNLLTDRFKSLQKRNIIQPSIRRHRKKSKVKVYTKPTHK 388
>UniRef50_Q9W3C2 Cluster: Uncharacterized protein CG1785; n=2;
Sophophora|Rep: Uncharacterized protein CG1785 -
Drosophila melanogaster (Fruit fly)
Length = 478
Score = 38.7 bits (86), Expect = 0.050
Identities = 16/49 (32%), Positives = 31/49 (63%)
Frame = -1
Query: 187 SGDLRRVAPAVNLLRERFESLQHRGALAASRVMMKKKRKLKSYFKPGHQ 41
+G+LR V +LL++RF +LQ L ++++ +KK K+K + + H+
Sbjct: 402 AGNLRNVKTESSLLKDRFHTLQRNNMLPTTKLVSRKKSKVKRFERNSHK 450
>UniRef50_A7S812 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 441
Score = 36.3 bits (80), Expect = 0.26
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = -1
Query: 187 SGDLRRVAPAVNLLRERFESLQHRGALAAS-RVMMKKKRKLKSYFKPGHQGHRPRRTEIY 11
SG+LR++ NL+ +RF SLQ R + V+ +K LK Y K H+ +P EI+
Sbjct: 374 SGNLRKLKQEGNLMTDRFRSLQKRNIIEPRVPVLPHRKYALKEYEKRSHR--KPCINEIW 431
Query: 10 QKS 2
+++
Sbjct: 432 EEN 434
>UniRef50_Q6CHT5 Cluster: Similar to sp|Q12080 Saccharomyces
cerevisiae Putative uncharacterized protein YPL146C;
n=1; Yarrowia lipolytica|Rep: Similar to sp|Q12080
Saccharomyces cerevisiae Putative uncharacterized
protein YPL146C - Yarrowia lipolytica (Candida
lipolytica)
Length = 464
Score = 33.9 bits (74), Expect = 1.4
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = -1
Query: 178 LRRVAPAVNLLRERFESLQHRGALAASRVMMKKKRKLKSYFK 53
LRR+ P +L+R+RF SLQ RG + A +K+ LK +K
Sbjct: 415 LRRLKPEGSLMRDRFRSLQQRGKIEA-----RKRHNLKPRYK 451
>UniRef50_Q4RYV2 Cluster: Chromosome 16 SCAF14974, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 16 SCAF14974, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 460
Score = 33.1 bits (72), Expect = 2.5
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -1
Query: 187 SGDLRRVAPAVNLLRERFESLQHRGAL-AASRVMMKKKRKLK 65
+G LR++ P ++L +RF+SLQ R + R K+K KLK
Sbjct: 409 AGSLRQLKPEGSVLTDRFKSLQKRNLIEPRERAKFKRKYKLK 450
>UniRef50_A3B798 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 264
Score = 31.9 bits (69), Expect = 5.7
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -3
Query: 125 PTPRRPRSLQGHDEEETEIKELLQAGT--SRSPTKTYRNLS 9
P P R Q DE + EL QAG SRSPT++ R++S
Sbjct: 142 PPPSTGRKRQREDEFVPSVTELEQAGVHFSRSPTRSLRDIS 182
>UniRef50_Q9NZM5 Cluster: Glioma tumor suppressor candidate region
gene 2 protein; n=33; Euteleostomi|Rep: Glioma tumor
suppressor candidate region gene 2 protein - Homo
sapiens (Human)
Length = 478
Score = 31.9 bits (69), Expect = 5.7
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 178 LRRVAPAVNLLRERFESLQHRGAL-AASRVMMKKKRKLK 65
LR + P N+LR+RF+S Q R + R K+K K+K
Sbjct: 428 LRTLKPEGNILRDRFKSFQRRNMIEPRERAKFKRKYKVK 466
>UniRef50_Q1Q576 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 1001
Score = 31.5 bits (68), Expect = 7.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = -1
Query: 181 DLRRVAPAVNLLRERFESLQHRGALAASRV 92
DL+R V+LL+ERF+ Q +G + AS++
Sbjct: 455 DLKREQKVVDLLKERFDEWQSKGYIPASKI 484
>UniRef50_Q23QB1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 367
Score = 31.1 bits (67), Expect = 9.9
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Frame = -1
Query: 181 DLRRVAPAVNLLRERFESLQHRGALAASRVMMKKKR------KLKSYFKPGHQ 41
+LR V PA +LLR+ +ES+ +G L K K+ K K F P Q
Sbjct: 301 NLRTVQPAGSLLRDEYESVFRKGLLEPKNYSQKDKKSKIPAIKFKQKFDPNFQ 353
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,468,895
Number of Sequences: 1657284
Number of extensions: 2766311
Number of successful extensions: 9290
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9289
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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