Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13a08
(804 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 155 3e-38
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 104 9e-23
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 101 8e-22
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 101 8e-22
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 101 8e-22
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 100 1e-21
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 100 1e-21
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 100 1e-21
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 99 2e-21
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 99 2e-21
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 99 2e-21
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 98 7e-21
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 98 7e-21
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 98 7e-21
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 95 5e-20
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 94 9e-20
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 94 1e-19
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 93 2e-19
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 93 3e-19
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 93 3e-19
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 92 4e-19
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 91 9e-19
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 91 9e-19
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 85 7e-17
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 82 4e-16
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 82 4e-16
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 78 6e-15
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 77 1e-14
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 77 1e-14
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 75 5e-14
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 75 6e-14
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 74 1e-13
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 74 1e-13
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 72 6e-13
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 71 1e-12
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 71 1e-12
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 69 3e-12
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 64 1e-10
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 64 1e-10
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 62 3e-10
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 60 2e-09
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 60 2e-09
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 57 1e-08
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 57 1e-08
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 56 3e-08
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 56 3e-08
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 52 6e-07
U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related h... 44 1e-04
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 42 4e-04
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 42 4e-04
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 42 4e-04
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 42 7e-04
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 41 0.001
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 41 0.001
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 40 0.002
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 37 0.019
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 33 0.24
U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical pr... 32 0.42
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 29 2.9
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 29 2.9
AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical ... 29 3.9
U23523-5|AAC46556.1| 77|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF043701-5|ABP57822.1| 166|Caenorhabditis elegans Hypothetical ... 28 9.0
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 155 bits (377), Expect = 3e-38
Identities = 70/108 (64%), Positives = 87/108 (80%)
Frame = -2
Query: 794 CMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRI 615
C+HGDK Q ERD VL +FK G+ I++ATDVAARGLDVD IK+VIN+DYPN+SEDY+HRI
Sbjct: 405 CIHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRI 464
Query: 614 GRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 471
GRTGRS KGT+Y FFT +N+ +AKDL+ VL EA Q + L+ MA+R
Sbjct: 465 GRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTVPQALRDMANR 512
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 104 bits (249), Expect = 9e-23
Identities = 49/109 (44%), Positives = 74/109 (67%)
Frame = -2
Query: 803 QLXCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYI 624
++ +HGD Q ER++ L F+ G A ILVAT VAARGLD+ +K+VIN+D P+ ++Y+
Sbjct: 453 EVVTIHGDLKQFEREKHLDLFRTGTAPILVATAVAARGLDIPNVKHVINYDLPSDVDEYV 512
Query: 623 HRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 477
HRIGRTGR + G + +FF N A++L+ ++ EANQ + L+ M+
Sbjct: 513 HRIGRTGRVGNVGLATSFFNDKNRNIARELMDLIVEANQELPDWLEGMS 561
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 101 bits (241), Expect = 8e-22
Identities = 47/105 (44%), Positives = 69/105 (65%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+HGD Q ER+ L F+ G+ ILVAT VAARGLD+ +++VIN+D P S++Y+HRIG
Sbjct: 428 IHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIG 487
Query: 611 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 477
RTGR + G + +FF N +DL +++ E+NQ + L +A
Sbjct: 488 RTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEVPEWLHQVA 532
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 101 bits (241), Expect = 8e-22
Identities = 47/105 (44%), Positives = 69/105 (65%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+HGD Q ER+ L F+ G+ ILVAT VAARGLD+ +++VIN+D P S++Y+HRIG
Sbjct: 412 IHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIG 471
Query: 611 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 477
RTGR + G + +FF N +DL +++ E+NQ + L +A
Sbjct: 472 RTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEVPEWLHQVA 516
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 101 bits (241), Expect = 8e-22
Identities = 47/105 (44%), Positives = 69/105 (65%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+HGD Q ER+ L F+ G+ ILVAT VAARGLD+ +++VIN+D P S++Y+HRIG
Sbjct: 409 IHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIG 468
Query: 611 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 477
RTGR + G + +FF N +DL +++ E+NQ + L +A
Sbjct: 469 RTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEVPEWLHQVA 513
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 100 bits (239), Expect = 1e-21
Identities = 41/89 (46%), Positives = 63/89 (70%)
Frame = -2
Query: 794 CMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRI 615
C+HGD Q ERD ++ +F+ G + +L+ TD+ ARG+DV + VIN+D P++ E+YIHRI
Sbjct: 297 CLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRI 356
Query: 614 GRTGRSKSKGTSYAFFTPSNSRQAKDLVS 528
GR+GR KG + F T +++RQ K++ S
Sbjct: 357 GRSGRFGRKGVAINFVTENDARQLKEIES 385
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 100 bits (239), Expect = 1e-21
Identities = 41/89 (46%), Positives = 63/89 (70%)
Frame = -2
Query: 794 CMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRI 615
C+HGD Q ERD ++ +F+ G + +L+ TD+ ARG+DV + VIN+D P++ E+YIHRI
Sbjct: 10 CLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRI 69
Query: 614 GRTGRSKSKGTSYAFFTPSNSRQAKDLVS 528
GR+GR KG + F T +++RQ K++ S
Sbjct: 70 GRSGRFGRKGVAINFVTENDARQLKEIES 98
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 100 bits (239), Expect = 1e-21
Identities = 41/89 (46%), Positives = 63/89 (70%)
Frame = -2
Query: 794 CMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRI 615
C+HGD Q ERD ++ +F+ G + +L+ TD+ ARG+DV + VIN+D P++ E+YIHRI
Sbjct: 297 CLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRI 356
Query: 614 GRTGRSKSKGTSYAFFTPSNSRQAKDLVS 528
GR+GR KG + F T +++RQ K++ S
Sbjct: 357 GRSGRFGRKGVAINFVTENDARQLKEIES 385
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 99 bits (238), Expect = 2e-21
Identities = 48/105 (45%), Positives = 69/105 (65%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+HG + Q+ER E L QF+ G +L+AT VA RGLD+ G+ +VIN+D P++ +DYIHRIG
Sbjct: 636 IHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIG 695
Query: 611 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 477
RTGR + G + +F + S +LV VL +A QI+ +Q A
Sbjct: 696 RTGRVGNSGRATSFISEDCS-LLSELVGVLADAQQIVPDWMQGAA 739
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 99 bits (238), Expect = 2e-21
Identities = 48/105 (45%), Positives = 69/105 (65%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+HG + Q+ER E L QF+ G +L+AT VA RGLD+ G+ +VIN+D P++ +DYIHRIG
Sbjct: 636 IHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIG 695
Query: 611 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 477
RTGR + G + +F + S +LV VL +A QI+ +Q A
Sbjct: 696 RTGRVGNSGRATSFISEDCS-LLSELVGVLADAQQIVPDWMQGAA 739
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 99 bits (238), Expect = 2e-21
Identities = 48/105 (45%), Positives = 69/105 (65%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+HG + Q+ER E L QF+ G +L+AT VA RGLD+ G+ +VIN+D P++ +DYIHRIG
Sbjct: 636 IHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIG 695
Query: 611 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 477
RTGR + G + +F + S +LV VL +A QI+ +Q A
Sbjct: 696 RTGRVGNSGRATSFISEDCS-LLSELVGVLADAQQIVPDWMQGAA 739
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 97.9 bits (233), Expect = 7e-21
Identities = 45/102 (44%), Positives = 69/102 (67%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+HG + Q+ER E L QF+ G +L+AT VA RGLD+ G+ +VIN+D P++ +DYIHRIG
Sbjct: 847 IHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIG 906
Query: 611 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQ 486
RTGR + G + +F + + +LV VL +A+Q++ +Q
Sbjct: 907 RTGRVGNAGRATSFIS-EDCNLLSELVRVLSDADQLVPEWMQ 947
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 97.9 bits (233), Expect = 7e-21
Identities = 45/102 (44%), Positives = 69/102 (67%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+HG + Q+ER E L QF+ G +L+AT VA RGLD+ G+ +VIN+D P++ +DYIHRIG
Sbjct: 847 IHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIG 906
Query: 611 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQ 486
RTGR + G + +F + + +LV VL +A+Q++ +Q
Sbjct: 907 RTGRVGNAGRATSFIS-EDCNLLSELVRVLSDADQLVPEWMQ 947
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 97.9 bits (233), Expect = 7e-21
Identities = 45/102 (44%), Positives = 69/102 (67%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+HG + Q+ER E L QF+ G +L+AT VA RGLD+ G+ +VIN+D P++ +DYIHRIG
Sbjct: 847 IHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIG 906
Query: 611 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQ 486
RTGR + G + +F + + +LV VL +A+Q++ +Q
Sbjct: 907 RTGRVGNAGRATSFIS-EDCNLLSELVRVLSDADQLVPEWMQ 947
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 95.1 bits (226), Expect = 5e-20
Identities = 40/107 (37%), Positives = 71/107 (66%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+HG ++Q +R+ L + G ILVATD+A+RG+DV I +V+N+D+P E+Y+HR+G
Sbjct: 368 LHGGRSQSDREMSLNMLRSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEYVHRVG 427
Query: 611 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 471
RTGR+ KG + +F ++ + L+ +L+++ Q + QL+ A++
Sbjct: 428 RTGRAGRKGEAMSFLWWNDRSNFEGLIQILEKSEQEVPDQLRRDAEK 474
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 94.3 bits (224), Expect = 9e-20
Identities = 47/105 (44%), Positives = 66/105 (62%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+HGD Q ER+E L +F++ ++ ILVATDVAARGLD+ I+ VINFD + ++HRIG
Sbjct: 541 LHGDMLQAERNENLLKFRK-KSQILVATDVAARGLDISEIRTVINFDMARDIDTHVHRIG 599
Query: 611 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 477
RTGR+ KGT+Y T + LV L+ +Q + L +A
Sbjct: 600 RTGRAGHKGTAYTLVTEKDIEMVGHLVKNLESVSQEVPKPLMDLA 644
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 93.9 bits (223), Expect = 1e-19
Identities = 45/93 (48%), Positives = 58/93 (62%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+HG K Q +R+ L KEG + ILVATDVA RG+DV + V+N+D S EDY HRIG
Sbjct: 603 LHGGKGQDQREYALQALKEGTSDILVATDVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIG 662
Query: 611 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEA 513
RTGR+ G + F TP ++ DL VL E+
Sbjct: 663 RTGRAGKHGKAITFLTPDDTAVYFDLKQVLVES 695
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 93.5 bits (222), Expect = 2e-19
Identities = 46/110 (41%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Frame = -2
Query: 803 QLXCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYI 624
++ +HG K Q +R + F++ +LVATDVA++GLD GI++VINFD P E+Y+
Sbjct: 467 EVASIHGGKDQSDRHAGIEAFRKNEKDVLVATDVASKGLDFQGIEHVINFDMPEDIENYV 526
Query: 623 HRIGRTGRSKSKGTSYAFFTPSNSRQA-KDLVSVLQEANQIISPQLQSMA 477
HRIGRTGRS KG + F + DL +L EA Q + L+ +A
Sbjct: 527 HRIGRTGRSGRKGLATTFINKKSEMSVLSDLKQLLAEAGQELPEFLKMLA 576
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 92.7 bits (220), Expect = 3e-19
Identities = 47/104 (45%), Positives = 65/104 (62%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
MHGD Q++RDEV+ +F+ G +L++TDV ARGLDV + VIN+D PN+ E YIHRIG
Sbjct: 295 MHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIG 354
Query: 611 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 480
R+GR KG + F +D V +L++ Q S Q+ M
Sbjct: 355 RSGRFGRKGVAINFV-------KQDDVRILRDIEQYYSTQIDEM 391
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 92.7 bits (220), Expect = 3e-19
Identities = 47/104 (45%), Positives = 65/104 (62%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
MHGD Q++RDEV+ +F+ G +L++TDV ARGLDV + VIN+D PN+ E YIHRIG
Sbjct: 295 MHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIG 354
Query: 611 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 480
R+GR KG + F +D V +L++ Q S Q+ M
Sbjct: 355 RSGRFGRKGVAINFV-------KQDDVRILRDIEQYYSTQIDEM 391
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 92.3 bits (219), Expect = 4e-19
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+HG Q +RD + FK G +LVAT VAARGLDV + V+N+D PN EDY+HR+G
Sbjct: 582 LHGGIDQHDRDSSIADFKTGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVG 641
Query: 611 RTGRSKSKGTSYAFFTPSN-SRQAKDLVSVLQEANQIISPQLQSMADR 471
RTGR+ KG +Y F P + + A ++ + A L++M +R
Sbjct: 642 RTGRAGRKGYAYTFVLPEHQEKMAGEICRAFETAGCKPPADLKAMFER 689
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 91.1 bits (216), Expect = 9e-19
Identities = 43/106 (40%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+HG + Q+ER L F+ G +L+AT V RGLD+ G+ +VIN+D PN+ +DYIHRIG
Sbjct: 593 IHGAREQKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIG 652
Query: 611 RTGRSKSKGTSYAFFTPSNSRQ-AKDLVSVLQEANQIISPQLQSMA 477
RTGR + G + +F + ++ Q LV L +A Q++ ++ A
Sbjct: 653 RTGRVGNSGRATSFISLADDVQILPQLVRTLADAEQVVPSWMKEAA 698
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 91.1 bits (216), Expect = 9e-19
Identities = 43/106 (40%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+HG + Q+ER L F+ G +L+AT V RGLD+ G+ +VIN+D PN+ +DYIHRIG
Sbjct: 593 IHGAREQKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIG 652
Query: 611 RTGRSKSKGTSYAFFTPSNSRQ-AKDLVSVLQEANQIISPQLQSMA 477
RTGR + G + +F + ++ Q LV L +A Q++ ++ A
Sbjct: 653 RTGRVGNSGRATSFISLADDVQILPQLVRTLADAEQVVPSWMKEAA 698
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 84.6 bits (200), Expect = 7e-17
Identities = 36/104 (34%), Positives = 63/104 (60%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
++ K+ +ERDE + +F+ G +LV T++ RGLD+ + VIN+D P S YIHR+G
Sbjct: 405 INSGKSDKERDETMERFRRGEIWVLVCTELLGRGLDLSDVGLVINYDLPTSIVSYIHRVG 464
Query: 611 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 480
RTGR+ G + +FT ++ + K + +V++++ + L M
Sbjct: 465 RTGRAGKSGHAVTYFTDADMKYIKSIATVIRQSGFDVPEYLMEM 508
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 82.2 bits (194), Expect = 4e-16
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYP--NSSEDYIHR 618
MH + Q++RD L F+ G+ +VA++V ARGL++ G+ +V+N+D P N ++Y++R
Sbjct: 1032 MHSYQNQEQRDRTLDDFRRGKYQCMVASNVCARGLNIAGLDHVVNYDMPDKNGFDEYVNR 1091
Query: 617 IGRTGRSKSKGTSYAFFTPSNSRQ-AKDLVSVLQEANQ 507
IGRTGR+ GTS AF N LVS+L EA +
Sbjct: 1092 IGRTGRAGFTGTSTAFVDVENDTDIIPCLVSILNEAKK 1129
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 82.2 bits (194), Expect = 4e-16
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYP--NSSEDYIHR 618
MH + Q++RD L F+ G+ +VA++V ARGL++ G+ +V+N+D P N ++Y++R
Sbjct: 1032 MHSYQNQEQRDRTLDDFRRGKYQCMVASNVCARGLNIAGLDHVVNYDMPDKNGFDEYVNR 1091
Query: 617 IGRTGRSKSKGTSYAFFTPSNSRQ-AKDLVSVLQEANQ 507
IGRTGR+ GTS AF N LVS+L EA +
Sbjct: 1092 IGRTGRAGFTGTSTAFVDVENDTDIIPCLVSILNEAKK 1129
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 78.2 bits (184), Expect = 6e-15
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = -2
Query: 794 CMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRI 615
C+HGD++ +ER L FK+G LV +DV ARGLDV G+ +VI+ P+ Y+HRI
Sbjct: 534 CLHGDRSAEERQSSLEGFKKGIIRFLVCSDVVARGLDVQGVPFVISVTLPDEKSMYVHRI 593
Query: 614 GRTGRSKSKGTS 579
GR GR++ G S
Sbjct: 594 GRVGRAERMGLS 605
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 77.4 bits (182), Expect = 1e-14
Identities = 35/76 (46%), Positives = 49/76 (64%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+HG +Q++R L +FK ILV TDVAARGLD+ + VIN+D P+ S+DY+HR+G
Sbjct: 313 LHGQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVG 372
Query: 611 RTGRSKSKGTSYAFFT 564
RT R+ G + T
Sbjct: 373 RTARAGRSGIAITVVT 388
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 77.4 bits (182), Expect = 1e-14
Identities = 35/88 (39%), Positives = 55/88 (62%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
M TQ +R E L +FK+ +LV+TD+A+RGLD++G++ VIN + P S + YIHR+G
Sbjct: 447 MQSSLTQGQRIESLSKFKKAEIDVLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIHRVG 506
Query: 611 RTGRSKSKGTSYAFFTPSNSRQAKDLVS 528
RT R+ G S + + K++V+
Sbjct: 507 RTARAGKAGRSISLVGEDERKLLKEIVN 534
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 75.4 bits (177), Expect = 5e-14
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSED-----Y 627
+HGD++Q R++++ FK R ++LV TD+ +RG+DV + VINFD P+ D +
Sbjct: 676 LHGDRSQDMREKLINDFKSNRVNLLVTTDLLSRGIDVSDLDRVINFDLPDGDPDQGADTF 735
Query: 626 IHRIGRTGRS--KSKGTSYAFFTPSNSRQA 543
IHR GRTGR+ K G +F P + R +
Sbjct: 736 IHRAGRTGRTGRKENGLCVSFVDPQSDRDS 765
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 74.9 bits (176), Expect = 6e-14
Identities = 34/76 (44%), Positives = 48/76 (63%)
Frame = -2
Query: 785 GDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRT 606
G Q++R E +F E +A++L+ATDVA+RGLD + I +VI D P +DYIHR+GR+
Sbjct: 354 GTMNQKKRIETFTKFDESKAAVLIATDVASRGLDFEHIDWVIQVDCPAQIDDYIHRVGRS 413
Query: 605 GRSKSKGTSYAFFTPS 558
R G S +PS
Sbjct: 414 ARMDDSGNSLLMVSPS 429
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 74.1 bits (174), Expect = 1e-13
Identities = 36/82 (43%), Positives = 52/82 (63%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+H Q++R + L +F E + ++L+ATDVAARGLD+ GI +VI++ P E YIHR G
Sbjct: 303 LHAKMIQKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIYIHRSG 362
Query: 611 RTGRSKSKGTSYAFFTPSNSRQ 546
RT R+ +G + P SRQ
Sbjct: 363 RTARASHRGLTVVLVDPP-SRQ 383
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 74.1 bits (174), Expect = 1e-13
Identities = 36/82 (43%), Positives = 52/82 (63%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+H Q++R + L +F E + ++L+ATDVAARGLD+ GI +VI++ P E YIHR G
Sbjct: 470 LHAKMIQKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIYIHRSG 529
Query: 611 RTGRSKSKGTSYAFFTPSNSRQ 546
RT R+ +G + P SRQ
Sbjct: 530 RTARASHRGLTVVLVDPP-SRQ 550
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 71.7 bits (168), Expect = 6e-13
Identities = 29/76 (38%), Positives = 45/76 (59%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+H Q R+ V + F++G LV +D+ RG+D+ + VINFD+P ++E Y+HRIG
Sbjct: 310 IHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLHRIG 369
Query: 611 RTGRSKSKGTSYAFFT 564
R+GR G + T
Sbjct: 370 RSGRFGHLGVAINLIT 385
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 70.9 bits (166), Expect = 1e-12
Identities = 35/89 (39%), Positives = 51/89 (57%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+H Q+ER FK+ + ILVATD+ RG+D++ + V N+D P S+ Y+HR+
Sbjct: 313 IHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVA 372
Query: 611 RTGRSKSKGTSYAFFTPSNSRQAKDLVSV 525
R GR +KG + F + N AK L SV
Sbjct: 373 RAGRFGTKGLAITFVSDEN--DAKTLNSV 399
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 70.9 bits (166), Expect = 1e-12
Identities = 35/89 (39%), Positives = 51/89 (57%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+H Q+ER FK+ + ILVATD+ RG+D++ + V N+D P S+ Y+HR+
Sbjct: 305 IHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVA 364
Query: 611 RTGRSKSKGTSYAFFTPSNSRQAKDLVSV 525
R GR +KG + F + N AK L SV
Sbjct: 365 RAGRFGTKGLAITFVSDEN--DAKTLNSV 391
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 69.3 bits (162), Expect = 3e-12
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Frame = -2
Query: 800 LXCM--HGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDY 627
+ CM HG + QQ+R +QF + IL+ TDVAARGLD+ + +++ +D + +Y
Sbjct: 339 IPCMSIHGKQKQQKRTTTFFQFCQAETGILLCTDVAARGLDIPAVDWIVQYDPTDEPREY 398
Query: 626 IHRIGRTGR 600
IHR+GRT R
Sbjct: 399 IHRVGRTAR 407
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 64.1 bits (149), Expect = 1e-10
Identities = 32/104 (30%), Positives = 56/104 (53%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+H Q++R L F+ +++ TDVA+RGLD+ + V+N + P + YIHR+G
Sbjct: 367 LHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVG 426
Query: 611 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 480
R+ R+ G++ +F T + V +LQ Q+I +L +
Sbjct: 427 RSARAGRFGSALSFVTQYD-------VELLQAVEQVIGKKLDEL 463
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 64.1 bits (149), Expect = 1e-10
Identities = 32/104 (30%), Positives = 56/104 (53%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIG 612
+H Q++R L F+ +++ TDVA+RGLD+ + V+N + P + YIHR+G
Sbjct: 367 LHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVG 426
Query: 611 RTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 480
R+ R+ G++ +F T + V +LQ Q+I +L +
Sbjct: 427 RSARAGRFGSALSFVTQYD-------VELLQAVEQVIGKKLDEL 463
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/90 (32%), Positives = 50/90 (55%)
Frame = -2
Query: 803 QLXCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYI 624
++ C HG+ ER++++ F +LV TD+ ARG+++ +IN+D + E+Y+
Sbjct: 253 KVSCFHGNMEHNEREDMVKDFNSRNTRVLVTTDLMARGMNIRK-SLIINYDVSGNMENYM 311
Query: 623 HRIGRTGRSKSKGTSYAFFTPSNSRQAKDL 534
R GR G SKG +FFT ++ K +
Sbjct: 312 LRNGRQGNFGSKGLPISFFTENDISDLKKI 341
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/74 (35%), Positives = 41/74 (55%)
Frame = -2
Query: 800 LXCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIH 621
L +HG + R + F + ++++TDV ARG+D+ I +VI FD P S ++H
Sbjct: 286 LFAVHGKCSNPHRASQIKAFSDSTNGVMISTDVMARGIDISDIDWVIQFDLPKHSSWFVH 345
Query: 620 RIGRTGRSKSKGTS 579
R GRT R +G +
Sbjct: 346 RAGRTARCGREGNA 359
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 60.1 bits (139), Expect = 2e-09
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 17/117 (14%)
Frame = -2
Query: 803 QLXCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYP------- 645
Q+ +HGD T ER + + FK G +L+ T+V ARG+DV + VIN+D P
Sbjct: 481 QVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLPIKYTDEG 540
Query: 644 ----------NSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQI 504
E Y+HRIGRTGR G + +S + ++++VL+ Q+
Sbjct: 541 TPMVVDGFTQPDCETYLHRIGRTGRFGKTGIAINLI---DSEDSMNMINVLENHFQM 594
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 60.1 bits (139), Expect = 2e-09
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 17/117 (14%)
Frame = -2
Query: 803 QLXCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYP------- 645
Q+ +HGD T ER + + FK G +L+ T+V ARG+DV + VIN+D P
Sbjct: 506 QVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLPIKYTDEG 565
Query: 644 ----------NSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQI 504
E Y+HRIGRTGR G + +S + ++++VL+ Q+
Sbjct: 566 TPMVVDGFTQPDCETYLHRIGRTGRFGKTGIAINLI---DSEDSMNMINVLENHFQM 619
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 60.1 bits (139), Expect = 2e-09
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 17/117 (14%)
Frame = -2
Query: 803 QLXCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYP------- 645
Q+ +HGD T ER + + FK G +L+ T+V ARG+DV + VIN+D P
Sbjct: 890 QVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLPIKYTDEG 949
Query: 644 ----------NSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQI 504
E Y+HRIGRTGR G + +S + ++++VL+ Q+
Sbjct: 950 TPMVVDGFTQPDCETYLHRIGRTGRFGKTGIAINLI---DSEDSMNMINVLENHFQM 1003
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/78 (38%), Positives = 46/78 (58%)
Frame = -2
Query: 740 KEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 561
K +AS L +RG+D + V+NFD+P +++ YIHR+GRT R +KGT+ +F P
Sbjct: 355 KGKKASKLDKESGVSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIP 414
Query: 560 SNSRQAKDLVSVLQEANQ 507
S + L + +E NQ
Sbjct: 415 S---ERAHLEQIQEEINQ 429
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/78 (38%), Positives = 46/78 (58%)
Frame = -2
Query: 740 KEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 561
K +AS L +RG+D + V+NFD+P +++ YIHR+GRT R +KGT+ +F P
Sbjct: 422 KGKKASKLDKESGVSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIP 481
Query: 560 SNSRQAKDLVSVLQEANQ 507
S + L + +E NQ
Sbjct: 482 S---ERAHLEQIQEEINQ 496
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = -2
Query: 776 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 597
+Q++R + Q + R ILV++D+ ARG+D D + V+N D + E Y HRIGR R
Sbjct: 294 SQKDRQLAVDQLRAKRVKILVSSDLTARGIDADNVNLVVNIDAAANEETYFHRIGRAARF 353
Query: 596 KSKGTS 579
+ G +
Sbjct: 354 GAHGAA 359
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = -2
Query: 776 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 597
+Q++R + Q + R ILV++D+ ARG+D D + V+N D + E Y HRIGR R
Sbjct: 294 SQKDRQLAVDQLRAKRVKILVSSDLTARGIDADNVNLVVNIDAAANEETYFHRIGRAARF 353
Query: 596 KSKGTS 579
+ G +
Sbjct: 354 GAHGAA 359
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = -2
Query: 752 LYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYA 573
+ +F E + +ILV TDVAARG+D+ + VIN +P ++ ++HR+GR R+ GT+ +
Sbjct: 308 IQKFHEKQNNILVVTDVAARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGRSGTAIS 367
Query: 572 FFTPSNSRQAKDLVSVL 522
DL L
Sbjct: 368 LIANDELPYLTDLFMFL 384
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/77 (35%), Positives = 43/77 (55%)
Frame = -2
Query: 752 LYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYA 573
+ +F E + +ILV TDVAARG+D+ + VIN +P ++ ++HR+GR R+ GT+ +
Sbjct: 308 IQKFHEKQNNILVVTDVAARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGRSGTAIS 367
Query: 572 FFTPSNSRQAKDLVSVL 522
DL L
Sbjct: 368 LIANDELPYLTDLFMFL 384
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 52.4 bits (120), Expect = 4e-07
Identities = 22/62 (35%), Positives = 39/62 (62%)
Frame = -2
Query: 770 QERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKS 591
+ R ++L +F + +L+ +DV ARG D++ + VIN++ P + ++HR GRTGR+
Sbjct: 436 KRRYKMLEKFNKNENRVLICSDVLARGTDLNKVDCVINYNLPADDKLFVHRAGRTGRAGQ 495
Query: 590 KG 585
G
Sbjct: 496 DG 497
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/96 (26%), Positives = 45/96 (46%)
Frame = -2
Query: 788 HGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGR 609
H T+ +R++ F + + +VAT G+D ++ VI++ PN+ E Y IGR
Sbjct: 477 HAGLTKNQREKAHTDFMRDKITTIVATVAFGMGIDKPDVRNVIHYGCPNNIESYYQEIGR 536
Query: 608 TGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQII 501
GR S F+ P + K + Q+ +++
Sbjct: 537 AGRDGSPSICRVFWAPKDLNTIKFKLRNSQQKEEVV 572
>U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related
helicase protein 2 protein.
Length = 620
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = -2
Query: 776 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 597
++Q++ E L F +G ILV+T VA GLD+ VI ++Y + ++ R GR
Sbjct: 333 SKQKQMEKLKMFADGENQILVSTSVAEEGLDIPECSLVIKYNYATNETAHVQRRGRARAR 392
Query: 596 KSK 588
SK
Sbjct: 393 NSK 395
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical protein
D2005.5 protein.
Length = 1119
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/88 (28%), Positives = 43/88 (48%)
Frame = -2
Query: 779 KTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGR 600
+T QE+ L +F GR ++VAT V GLDV +I Y SS I + + GR
Sbjct: 811 QTSQEQQLTLDKFNNGRLKVIVATSVVEEGLDVTACNLIIK--YNCSSGSAIQLVQQRGR 868
Query: 599 SKSKGTSYAFFTPSNSRQAKDLVSVLQE 516
+++K + + +S + +++ E
Sbjct: 869 ARAKNSRSVLLSVKSSINETETNALISE 896
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -2
Query: 719 LVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTS 579
+V T++ ARG+DV +K+ I + + Y HRIGR GR G S
Sbjct: 430 VVCTNILARGIDVSSVKHTIIMEMSADFDTYKHRIGRVGRDGCGGKS 476
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = -2
Query: 776 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 597
++Q++ E L F +G ILV+T VA GLDV VI ++Y + ++ R GR GR+
Sbjct: 751 SKQKQMEKLKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYATNEIAHVQRRGR-GRA 809
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = -2
Query: 776 TQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 597
++Q++ E L F +G ILV+T VA GLDV VI ++Y + ++ R GR GR+
Sbjct: 751 SKQKQMEKLKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYATNEIAHVQRRGR-GRA 809
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = -2
Query: 770 QERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKS 591
+ + EVL +F + L+AT V G+DV VI FD P Y+ GR R+ S
Sbjct: 440 KRQTEVLRRFHRNEINCLIATSVLEEGVDVKQCNLVIKFDRPLDMRSYVQSKGRARRAGS 499
Query: 590 K 588
+
Sbjct: 500 R 500
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -2
Query: 734 GRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFF 567
G+ ++VAT G+D +++VI+ P S E+Y GR GR T ++
Sbjct: 358 GKIQVIVATVAFGMGIDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQPATCILYY 413
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -2
Query: 734 GRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFF 567
G+ ++VAT G+D +++VI+ P S E+Y GR GR T ++
Sbjct: 381 GKIQVIVATVAFGMGIDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQPATCILYY 436
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -2
Query: 719 LVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKG 585
+V T++ +RG+DV +K I + Y+HRIGR GR G
Sbjct: 428 VVCTNIMSRGIDVSSVKQTIIMEMSTDFPSYMHRIGRVGRDGCGG 472
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -2
Query: 719 LVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRS 597
+V T++ ARG+DV +K+ I + + Y HRIGR S
Sbjct: 277 VVCTNILARGIDVSSVKHTIIMEMSADFDTYKHRIGRVSIS 317
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = -2
Query: 791 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVIN 657
+H + +E+D+V Q G +++T+VA + +DGI++VI+
Sbjct: 345 LHSTLSVEEQDKVFDQAPVGIRKCILSTNVAETSVTIDGIRFVID 389
>U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical
protein W03A3.2 protein.
Length = 1540
Score = 32.3 bits (70), Expect = 0.42
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = -2
Query: 788 HGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFD--YPN--SSEDYIH 621
H T +ER+ + F+E ILVAT A G+++ + +I P+ +S +Y
Sbjct: 206 HAGLTMEERECIELGFREKNIVILVATSTLASGVNLPAERVLIKAQPRGPSALTSLNYRQ 265
Query: 620 RIGRTGRS--KSKGTSY 576
+GR GR+ ++G +Y
Sbjct: 266 MVGRAGRTGHATRGETY 282
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -2
Query: 734 GRASILVATDVAARGLDVDGIKYVIN 657
G+ +++AT++A L +DGI YV++
Sbjct: 806 GKRKVVIATNIAETSLTIDGIFYVVD 831
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -2
Query: 734 GRASILVATDVAARGLDVDGIKYVIN 657
G+ +++AT++A L +DGI YV++
Sbjct: 806 GKRKVVIATNIAETSLTIDGIFYVVD 831
>AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical
protein Y105C5A.1 protein.
Length = 767
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 317 ILFNSRQIVCNHCRPPFGYSCQNCFRV*KSRHHLGHLHRIC-SCSTRRHHHRNGRPSTAV 493
++ N + +CN+ + Y C NC + KS G ++C C T + N RP+ V
Sbjct: 488 VVCNCAEKLCNNLKFEPRYGCTNCKKNVKSSSDHGATEKLCLICQTYQKLTGNVRPARNV 547
>U23523-5|AAC46556.1| 77|Caenorhabditis elegans Hypothetical
protein F53A9.1 protein.
Length = 77
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 410 HHLGHLHRICSCSTRRHHHRNG 475
HH G LH + T HHH +G
Sbjct: 49 HHHGFLHELGHAMTGHHHHHHG 70
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = -3
Query: 583 HHMLSLPLQIPVKPKIWYLFYKKLIRLLAHNCSRW 479
+++++LP+ + K W+LFY I+ + H+ W
Sbjct: 580 NYLVTLPIGVIRKASTWFLFYDD-IQKIVHSLQNW 613
>AF043701-5|ABP57822.1| 166|Caenorhabditis elegans Hypothetical
protein K12C11.7 protein.
Length = 166
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/29 (34%), Positives = 21/29 (72%)
Frame = +3
Query: 702 NISCYKNTSTTFLELIQNFISFLLSFIAM 788
+IS +++ +++FL +QNF+ + L +AM
Sbjct: 100 SISSWRHFASSFLFFLQNFVDYSLMLVAM 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,423,600
Number of Sequences: 27780
Number of extensions: 326449
Number of successful extensions: 895
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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