Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc13a06
(359 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41424 Cluster: Uncharacterized 12.2 kDa protein in EGT... 185 2e-46
UniRef50_O10279 Cluster: Uncharacterized 11.6 kDa protein; n=7; ... 76 2e-13
UniRef50_Q6PZ56 Cluster: Putative uncharacterized protein; n=1; ... 53 1e-06
UniRef50_Q80LK5 Cluster: Putative uncharacterized protein; n=1; ... 41 0.008
UniRef50_Q0N3Y7 Cluster: Ac19-like protein; n=1; Clanis bilineat... 36 0.21
UniRef50_Q0TT26 Cluster: Putative uncharacterized protein; n=1; ... 35 0.49
UniRef50_Q54PF2 Cluster: Putative uncharacterized protein; n=1; ... 34 0.65
UniRef50_Q239N7 Cluster: Protein kinase domain containing protei... 33 1.5
UniRef50_A2WNA6 Cluster: Putative uncharacterized protein; n=4; ... 33 2.0
UniRef50_Q26ES2 Cluster: Outer membrane protein; n=2; Flavobacte... 32 3.5
UniRef50_P12828 Cluster: Early 40.9 kDa protein; n=5; Nucleopoly... 32 3.5
UniRef50_Q8D345 Cluster: Tig protein; n=1; Wigglesworthia glossi... 31 4.6
UniRef50_Q8ILS3 Cluster: Putative uncharacterized protein; n=2; ... 31 4.6
UniRef50_Q54NY3 Cluster: Cytochrome P450 family protein; n=1; Di... 31 6.1
UniRef50_A2FV30 Cluster: Putative uncharacterized protein; n=1; ... 31 6.1
UniRef50_A0Q3D9 Cluster: Uncharacterized protein with repeats; n... 31 8.0
UniRef50_Q8IL74 Cluster: Putative uncharacterized protein; n=1; ... 31 8.0
UniRef50_Q5CEM3 Cluster: Putative uncharacterized protein; n=2; ... 31 8.0
UniRef50_Q54L62 Cluster: Putative uncharacterized protein; n=1; ... 31 8.0
UniRef50_Q4U9S5 Cluster: Phosphatidylinositol 4-kinase, putative... 31 8.0
UniRef50_Q24GS5 Cluster: Putative uncharacterized protein; n=1; ... 31 8.0
>UniRef50_P41424 Cluster: Uncharacterized 12.2 kDa protein in
EGT-IAP1 intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 12.2 kDa
protein in EGT-IAP1 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 108
Score = 185 bits (451), Expect = 2e-46
Identities = 90/104 (86%), Positives = 95/104 (91%)
Frame = -1
Query: 314 MNSGDDDATRLHYSNAHAKQTLATLFANRNHSSFYEYAITFVSTLLFKNNLNLMVACNLI 135
MNSGD ATRLH SNAHAKQTLATLFANRNHSSFYEYAI FVSTLLFKNNLNLM ACNLI
Sbjct: 1 MNSGD--ATRLHCSNAHAKQTLATLFANRNHSSFYEYAIAFVSTLLFKNNLNLMTACNLI 58
Query: 134 NTLINFEINVFGKSLLLSKFVNFCIANSDGVTIQHKMLTKRVKF 3
N+LINFE+N+FGKSLLL+ FVNFCIANSDGVTIQHKMLT + F
Sbjct: 59 NSLINFELNMFGKSLLLNGFVNFCIANSDGVTIQHKMLTNVLSF 102
>UniRef50_O10279 Cluster: Uncharacterized 11.6 kDa protein; n=7;
Nucleopolyhedrovirus|Rep: Uncharacterized 11.6 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 104
Score = 76.2 bits (179), Expect = 2e-13
Identities = 37/93 (39%), Positives = 57/93 (61%)
Frame = -1
Query: 293 ATRLHYSNAHAKQTLATLFANRNHSSFYEYAITFVSTLLFKNNLNLMVACNLINTLINFE 114
+TRL ++NA A+Q + L A H + E A+ FV + + N+L+ NL + ++ E
Sbjct: 3 STRLTWTNARAQQAILALAAT-GHGVYCERAVAFVISAITNNSLSWPTLLNLFDLVVAVE 61
Query: 113 INVFGKSLLLSKFVNFCIANSDGVTIQHKMLTK 15
N+F KS L+ VNFC+AN DG T+QH++L K
Sbjct: 62 RNLFKKSWALNALVNFCVANGDGFTVQHQLLNK 94
>UniRef50_Q6PZ56 Cluster: Putative uncharacterized protein; n=1;
Anticarsia gemmatalis MNPV|Rep: Putative uncharacterized
protein - Anticarsia gemmatalis MNPV
Length = 111
Score = 53.2 bits (122), Expect = 1e-06
Identities = 27/77 (35%), Positives = 40/77 (51%)
Frame = -1
Query: 239 FANRNHSSFYEYAITFVSTLLFKNNLNLMVACNLINTLINFEINVFGKSLLLSKFVNFCI 60
FA +H + E AI F + N + +L + ++ E NVF KSL+L+ VNFCI
Sbjct: 8 FAMASHDVYCERAIAFAIKTVTGNMVTWPTLLHLFDFIVTLERNVFNKSLVLNGLVNFCI 67
Query: 59 ANSDGVTIQHKMLTKRV 9
+ DG T+ + RV
Sbjct: 68 VHGDGYTVATSIAKSRV 84
>UniRef50_Q80LK5 Cluster: Putative uncharacterized protein; n=1;
Adoxophyes honmai NPV|Rep: Putative uncharacterized
protein - Adoxophyes honmai nucleopolyhedrovirus
Length = 119
Score = 40.7 bits (91), Expect = 0.008
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = -1
Query: 167 NLNLMVACNLINTLINFEINVFGKSLLLSKFVNFCIANSDGVTIQHKMLTK 15
NL L N++N +I E V KS++L+ VNF I +SDGV+ Q + TK
Sbjct: 52 NLELTKCKNILNIIIKTEQLVRNKSVVLNLIVNFLIRHSDGVSFQCMLNTK 102
>UniRef50_Q0N3Y7 Cluster: Ac19-like protein; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: Ac19-like protein - Clanis
bilineata nucleopolyhedrosis virus
Length = 125
Score = 35.9 bits (79), Expect = 0.21
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = -1
Query: 215 FYEYAITFVSTLL--FKNN-LNLMVACNLINTLINFEINVFGKSLLLSKFVNFCIANSDG 45
FY T L F NN L L L++++I E +F +SLLL V F I NSDG
Sbjct: 43 FYTICYTVARKYLHQFNNNVLALNTIQTLLDSIIQAEQMLFSRSLLLDFCVRFLINNSDG 102
Query: 44 VTIQ 33
+Q
Sbjct: 103 QNLQ 106
>UniRef50_Q0TT26 Cluster: Putative uncharacterized protein; n=1;
Clostridium perfringens ATCC 13124|Rep: Putative
uncharacterized protein - Clostridium perfringens
(strain ATCC 13124 / NCTC 8237 / Type A)
Length = 164
Score = 34.7 bits (76), Expect = 0.49
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -1
Query: 200 ITFVSTLLFKNNLNLMVACNLINTLINFEINVFGKSLLLSKFVNFCIAN 54
++FVS LLFK + ++A L N +INF F + L+ FV F N
Sbjct: 100 MSFVSALLFKGFNSELIANWLQNIVINFPFAFFTQLFLIQPFVRFVFRN 148
>UniRef50_Q54PF2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 542
Score = 34.3 bits (75), Expect = 0.65
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = -1
Query: 350 TPRFS*FNKRSIMNSGDDDATRLHYSNAHAK-QTLATLFANRNHSSF-YEYAITFVSTLL 177
+P FS FNK S ++ G DD+ LH + +K T T N +SF Y + T +
Sbjct: 229 SPTFSNFNKHSQVSRGFDDSQPLHRNTFISKPTTTTTTTTTTNTNSFNYNNSNNNTQTKI 288
Query: 176 FKNNLNLMVACNLINTLINFEINVFGKSLLLSK 78
KN N N N N N + KS L K
Sbjct: 289 NKNQSN-NTYNNNNNNNNNNNNNNYNKSKLFEK 320
>UniRef50_Q239N7 Cluster: Protein kinase domain containing protein;
n=14; Tetrahymena thermophila SB210|Rep: Protein kinase
domain containing protein - Tetrahymena thermophila SB210
Length = 2290
Score = 33.1 bits (72), Expect = 1.5
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +1
Query: 4 NLTRLVNILC*IVTPSLLAMQKLTNLLSNKLLPNTLISKLINVLIKLHATIKFKLFLKSN 183
N+T LV+ L LL QK+ NLL+ +LL L+ K +L K AT F +F N
Sbjct: 2043 NITSLVSKLLFQQLTYLLLNQKIINLLT-QLLTYLLLQKQTKILTK--ATFFFTIFSPPN 2099
Query: 184 VLTNVMAYS 210
+ + + YS
Sbjct: 2100 LFSQFIIYS 2108
Score = 30.7 bits (66), Expect = 8.0
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = +1
Query: 4 NLTRLVNILC*IVTPSLLAMQKLTNLLSNKLLPNTLISKLINVLIKLHATIKFKLFLKSN 183
N+T LV+ L LL QK+ NLL+ +LL L+ K +L K AT F + N
Sbjct: 1133 NITSLVSKLLFQQLTYLLLNQKIINLLT-QLLTYLLLQKQTKILTK--ATFFFTILSPPN 1189
Query: 184 VLTNVMAYS 210
+ + + YS
Sbjct: 1190 LFSQFIIYS 1198
Score = 30.7 bits (66), Expect = 8.0
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = +1
Query: 4 NLTRLVNILC*IVTPSLLAMQKLTNLLSNKLLPNTLISKLINVLIKLHATIKFKLFLKSN 183
N+T LV+ L LL QK+ NLL+ +LL L+ K +L K AT F + N
Sbjct: 1640 NITSLVSKLLFQQLTYLLLNQKIINLLT-QLLTYLLLQKQTKILTK--ATFFFTILSPPN 1696
Query: 184 VLTNVMAYS 210
+ + + YS
Sbjct: 1697 LFSQFIIYS 1705
>UniRef50_A2WNA6 Cluster: Putative uncharacterized protein; n=4; Oryza
sativa|Rep: Putative uncharacterized protein - Oryza
sativa subsp. indica (Rice)
Length = 1026
Score = 32.7 bits (71), Expect = 2.0
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +1
Query: 61 MQKLTNLLSNKLLPNTLISKLINVLIKLHATIKFKLFLKSNVLTNV 198
+ L+NL+ L N L S+L+ +L KLH+ + KL++ S + T +
Sbjct: 869 ISSLSNLVRLSLRENYLESELVKILGKLHSLLSLKLYVNSYLGTEL 914
>UniRef50_Q26ES2 Cluster: Outer membrane protein; n=2;
Flavobacteria|Rep: Outer membrane protein -
Flavobacteria bacterium BBFL7
Length = 823
Score = 31.9 bits (69), Expect = 3.5
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = -1
Query: 344 RFS*FNKRSIMNSGDDDATRLHYSN--AHAKQTLATLFANRNHSSFYE 207
RF+ N+RS+ SG +++ SN + + TL++L RN++ FYE
Sbjct: 502 RFNRTNRRSLRLSGGTAVQQINNSNPISTMENTLSSLLFERNYAKFYE 549
>UniRef50_P12828 Cluster: Early 40.9 kDa protein; n=5;
Nucleopolyhedrovirus|Rep: Early 40.9 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 353
Score = 31.9 bits (69), Expect = 3.5
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 316 MERLLNQLNLGVLP 357
MERLLNQLNLGVLP
Sbjct: 1 MERLLNQLNLGVLP 14
>UniRef50_Q8D345 Cluster: Tig protein; n=1; Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis|Rep:
Tig protein - Wigglesworthia glossinidia brevipalpis
Length = 435
Score = 31.5 bits (68), Expect = 4.6
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +1
Query: 46 PSLLAMQKLTNLLSNKLLPNTLISKLINVLIKLHATIKFKLFLKS 180
PS+L ++ N LS L N INVL LH++IK KL K+
Sbjct: 301 PSILFENEIKNFLSTNLNCNLNDFSKINVLSLLHSSIKNKLINKT 345
>UniRef50_Q8ILS3 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1124
Score = 31.5 bits (68), Expect = 4.6
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = -1
Query: 260 KQTLATLFANRNHSSFYEYAITFVSTLLFKNNLNLMVAC-NLINTLINFEINVFGKSLLL 84
+ LA + + N S+ Y Y +L+KN +N + C N N +I E K
Sbjct: 554 QMVLANILIHFNISNRYVYFHNVNDYILYKNYINKLTTCTNKENKIIQIEEKTMNKDKEE 613
Query: 83 SKFVNFCIANSDGVTIQHK 27
S ++N+ +S ++H+
Sbjct: 614 SIYLNYKNKDSTKEMVKHE 632
>UniRef50_Q54NY3 Cluster: Cytochrome P450 family protein; n=1;
Dictyostelium discoideum AX4|Rep: Cytochrome P450 family
protein - Dictyostelium discoideum AX4
Length = 502
Score = 31.1 bits (67), Expect = 6.1
Identities = 31/108 (28%), Positives = 49/108 (45%)
Frame = -1
Query: 329 NKRSIMNSGDDDATRLHYSNAHAKQTLATLFANRNHSSFYEYAITFVSTLLFKNNLNLMV 150
NK I+N+ TR ++ + +F N N SF Y+ + L+FK LNL+
Sbjct: 171 NKSIIINN-----TRFYFQSLTLTVMFKMIF-NEN-KSFQLYSDSTEFKLIFKTILNLLN 223
Query: 149 ACNLINTLINFEINVFGKSLLLSKFVNFCIANSDGVTIQHKMLTKRVK 6
+ N+ N + +F + +F LL KF NS I + R+K
Sbjct: 224 SLNVYNVIYDF-LGIFQPILL--KFTKILDKNSFLSKIATEKFNSRIK 268
>UniRef50_A2FV30 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 440
Score = 31.1 bits (67), Expect = 6.1
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Frame = -1
Query: 344 RFS*FNKRSIMNSGDDDATRLHYSNAHAKQTLATLFA-NRNHSSFYEYAITFVSTLLFKN 168
RFS N I+ D + ++ +N T+ F NRN T + L+ K+
Sbjct: 93 RFSIENNYEILQFMDSNGFSINKTNTRTGYTILNNFIKNRN--------FTAIEILMKKD 144
Query: 167 NLNLMVACN--LINTLINFEINVFGKSLLLSKFVNFCIANSDGVTIQHKML 21
LN + + + LI E + F L K VNF N +G+ I HK++
Sbjct: 145 LLNNSIKSDKDFLFKLIECEYSDFYDKLFSMKEVNFNSPNENGLYIVHKIV 195
>UniRef50_A0Q3D9 Cluster: Uncharacterized protein with repeats; n=2;
Clostridium|Rep: Uncharacterized protein with repeats -
Clostridium novyi (strain NT)
Length = 836
Score = 30.7 bits (66), Expect = 8.0
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Frame = -1
Query: 275 SNAHAKQTLATLFANRNHSSFYEYAITFVSTLLFKNNLNLMVACNLINTLINFE----IN 108
+N ++ LF + N S E IT + LF NNL + LIN+ I +N
Sbjct: 85 NNMELTNSIQKLFNDLNIQSINEKTITLLVKSLFSNNLLPKFSDTLINSSIETSLIDILN 144
Query: 107 V---FGKSLLLSKFVNFCI 60
+ F KS+ ++K NF I
Sbjct: 145 LYMCFEKSINITKLKNFSI 163
>UniRef50_Q8IL74 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1076
Score = 30.7 bits (66), Expect = 8.0
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -1
Query: 287 RLHYSNAHAKQTLATLFANRNHSSFYEYAITFVSTLLFKNNLNLMVACNLINTLINFE 114
R+ + N H K N N+ +Y + + KN++N++ N+IN L N E
Sbjct: 118 RMKFINLHMKMNSRKSQTNMNYDMMQQYYNLYSTCNDNKNSMNVINGMNIINGLNNME 175
>UniRef50_Q5CEM3 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 818
Score = 30.7 bits (66), Expect = 8.0
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = -1
Query: 221 SSFYEYAITFVSTLLFKNNLNLMVACNLINTLINFEINVFGKSLL 87
SS Y Y T L++K LN A N IN +NF +N KS L
Sbjct: 45 SSLYGYNNTEGDLLIYKRPLNRSQALNNINLCLNFILNPPEKSKL 89
>UniRef50_Q54L62 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1574
Score = 30.7 bits (66), Expect = 8.0
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = -1
Query: 248 ATLFANRNHSSFYEYAITFVSTLLFKNNLNLMVACNLINTLI 123
++L ++ N SF Y+ +F S L KN+L +++ C++I +I
Sbjct: 1506 SSLLSSSNSKSF-NYSQSFQSNNLSKNDLIILIVCSIIGVII 1546
>UniRef50_Q4U9S5 Cluster: Phosphatidylinositol 4-kinase, putative;
n=2; Theileria|Rep: Phosphatidylinositol 4-kinase,
putative - Theileria annulata
Length = 1194
Score = 30.7 bits (66), Expect = 8.0
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -1
Query: 227 NHSSFYEYAITFVSTLLFKNNLNLMVACNLINTLINFEINVFGKSLLLSKFVN 69
N S Y F+S +LFKNN +L + +T F+ ++L++ F+N
Sbjct: 220 NTSFGYVRLCNFISKVLFKNNKDLGTLVSRASTWSRFDTKYIKETLIVLLFIN 272
>UniRef50_Q24GS5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 671
Score = 30.7 bits (66), Expect = 8.0
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 25 ILC*IVTPSLLAMQKLTNLLSNKLLPNTL-ISKLINVLIKLHATIKFKLFLKSNVLTNVM 201
ILC I LL ++ + NK L + + K +N++ K+ +IKF LF+ + V+
Sbjct: 353 ILCLIYGLELLVIETWIGFIYNKYLWGLIFMRKKVNLIWKIIYSIKFILFVACITSSFVL 412
Query: 202 AYS*KLL*LRLANKVASVCF 261
AY N+++ CF
Sbjct: 413 AYLYNKEYNFFQNQISESCF 432
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 288,250,322
Number of Sequences: 1657284
Number of extensions: 4659891
Number of successful extensions: 12629
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 12330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12624
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12367962079
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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